Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010231
CDS Infomation

pacid=37428740 polypeptide=PGSC0003DMP400007140 locus=PGSC0003DMG400004006 ID=PGSC0003DMT400010231.v4.03 annot-version=v4.03
Sequence

ATGTGGGATCTAAATGAATCAGAAGAAGGTTGTTCTACTCCGATAGAGTTTGAATGCGAT
GATGAGAAAGGTAAACGGGTCGGATCCGTTTCGAATTCAAGTTCATCGGCTGTAGCTGTT
GATGATATTTCTGAAGAGGAATTAGATGGAGAAAGAGGGAAGAAAAAGAGAGGTACTCCT
CCAAGCAAAATTTTCGGGTTCTCTATGGTGGGTCCGGGTAACGGCGATGAAGAACAGCCG
GTGACCCGCCAGTTTTTTCCGGTTGATGAGTCTGAAATGGGTGGTGTTGCTGCTGCTGAA
AATGGATCCCCGAATTTTCCCAGAGCTCACTGGGTTGGAGTTAAATTTTACCAAACGGAG
ACACTTGGCAACACGGGATTGGCGAAGCCTGTAGATATGGTTCAGCAGCAACAGCAGCAG
CCTATTAAGAAGAGCCGCCGTGGACCAAGGTCTAGAAGCTCACAGTACCGTGGAGTTACC
TTCTACCGGAGAACTGGCCGGTGGGAATCTCATATATGGGATTGTGGAAAACAAGTTTAT
CTAGGTGGATTTGATACTGCTCATGCAGCAGCTCGGGCATACGATAGGGCAGCCATCAAA
TTCCGGGGAGTAGAAGCCGACATAAACTTTAGCTTAGAGGATTATGAATCCGATTTAAAA
CAGATGACAAGTTTAACAAAGGAAGAATTTGTGCATGTGCTCCGAAGACAAAGCACTGGT
TTTCCGAGGGGAAGCTCCAAGTATAGAGGAGTGACTTTGCACAAATGTGGTAGATGGGAA
GCTAGAATGGGACAGTTCTTAGGCAAAAAGTACGTTTATTTGGGGCTCTTTGATACTGAG
ATTGAAGCTGCCAGAGCTTATGATAAAGCTGCCATCAAGTGTAATGGCAAGGATGCAGTT
ACAAACTTTGATCCAAGCATTTATGAAGATGAACTAAATTCAATTGAATCTTCCGATAAC
GCGGCTGATCACAATCTGGATTTAAGTTTGGGTGGTTCAAGCTCAAAGCAAGGAAGCCGA
GAATTGGGGGATAATAGAGGTCAAAATTCTTCATCAATGCAATTGGATATTGATTGGCAG
CGCCATGGTTTAAGGCCTGAGAAGCAATCTTCTGCCTTAATTGATGCTCGAAGAAGAGAA
AACGGGTACAATGAAACAGAAACTTTGCAACTTTTAAGCCAGACGCACTTGCATTCTCCA
GTCTCCTTGAAGCATAATAATAGTCAAGTGCAACGGTTTAGCCAATTTATGAGACCTGGT
GATCAATCCCATATGATTCAAATGTTTCCACCGCAATTCGGCTCATCCAATTATCAAATT
CAATTTCCAAGTGGCAGCAATGGAGGCAGAATTGGAGGTACAAATGTAGGAGATTTATCG
CTTGCGGCGACAAGCAATGGTTCTTCACAGTGGCAATCCAATTTTCCTCCTCAGATATTT
GCAGCTGCTGCAGCATCATCAGGATTCCCTCAGCAGATAGTAAGACCTCAAAATTGGTCC
TCAGAAAATGGCTTCCATCACTCACTCAGGAGACCATCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400007140
PEP Infomation

pacid=37428740 transcript=PGSC0003DMT400010231 locus=PGSC0003DMG400004006 ID=PGSC0003DMT400010231.v4.03 annot-version=v4.03
Sequence

MWDLNESEEGCSTPIEFECDDEKGKRVGSVSNSSSSAVAVDDISEEELDGERGKKKRGTP
PSKIFGFSMVGPGNGDEEQPVTRQFFPVDESEMGGVAAAENGSPNFPRAHWVGVKFYQTE
TLGNTGLAKPVDMVQQQQQQPIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVY
LGGFDTAHAAARAYDRAAIKFRGVEADINFSLEDYESDLKQMTSLTKEEFVHVLRRQSTG
FPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKDAV
TNFDPSIYEDELNSIESSDNAADHNLDLSLGGSSSKQGSRELGDNRGQNSSSMQLDIDWQ
RHGLRPEKQSSALIDARRRENGYNETETLQLLSQTHLHSPVSLKHNNSQVQRFSQFMRPG
DQSHMIQMFPPQFGSSNYQIQFPSGSNGGRIGGTNVGDLSLAATSNGSSQWQSNFPPQIF
AAAAASSGFPQQIVRPQNWSSENGFHHSLRRPS*

Transcript Sequence

Transcript ID

PGSC0003DMT400010231
Transcript Infomation

pacid=37428740 locus=PGSC0003DMG400004006 ID=PGSC0003DMT400010231.v4.03 annot-version=v4.03
Sequence

ATGTGGGATCTAAATGAATCAGAAGAAGGTTGTTCTACTCCGATAGAGTTTGAATGCGAT
GATGAGAAAGGTAAACGGGTCGGATCCGTTTCGAATTCAAGTTCATCGGCTGTAGCTGTT
GATGATATTTCTGAAGAGGAATTAGATGGAGAAAGAGGGAAGAAAAAGAGAGGTACTCCT
CCAAGCAAAATTTTCGGGTTCTCTATGGTGGGTCCGGGTAACGGCGATGAAGAACAGCCG
GTGACCCGCCAGTTTTTTCCGGTTGATGAGTCTGAAATGGGTGGTGTTGCTGCTGCTGAA
AATGGATCCCCGAATTTTCCCAGAGCTCACTGGGTTGGAGTTAAATTTTACCAAACGGAG
ACACTTGGCAACACGGGATTGGCGAAGCCTGTAGATATGGTTCAGCAGCAACAGCAGCAG
CCTATTAAGAAGAGCCGCCGTGGACCAAGGTCTAGAAGCTCACAGTACCGTGGAGTTACC
TTCTACCGGAGAACTGGCCGGTGGGAATCTCATATATGGGATTGTGGAAAACAAGTTTAT
CTAGGTGGATTTGATACTGCTCATGCAGCAGCTCGGGCATACGATAGGGCAGCCATCAAA
TTCCGGGGAGTAGAAGCCGACATAAACTTTAGCTTAGAGGATTATGAATCCGATTTAAAA
CAGATGACAAGTTTAACAAAGGAAGAATTTGTGCATGTGCTCCGAAGACAAAGCACTGGT
TTTCCGAGGGGAAGCTCCAAGTATAGAGGAGTGACTTTGCACAAATGTGGTAGATGGGAA
GCTAGAATGGGACAGTTCTTAGGCAAAAAGTACGTTTATTTGGGGCTCTTTGATACTGAG
ATTGAAGCTGCCAGAGCTTATGATAAAGCTGCCATCAAGTGTAATGGCAAGGATGCAGTT
ACAAACTTTGATCCAAGCATTTATGAAGATGAACTAAATTCAATTGAATCTTCCGATAAC
GCGGCTGATCACAATCTGGATTTAAGTTTGGGTGGTTCAAGCTCAAAGCAAGGAAGCCGA
GAATTGGGGGATAATAGAGGTCAAAATTCTTCATCAATGCAATTGGATATTGATTGGCAG
CGCCATGGTTTAAGGCCTGAGAAGCAATCTTCTGCCTTAATTGATGCTCGAAGAAGAGAA
AACGGGTACAATGAAACAGAAACTTTGCAACTTTTAAGCCAGACGCACTTGCATTCTCCA
GTCTCCTTGAAGCATAATAATAGTCAAGTGCAACGGTTTAGCCAATTTATGAGACCTGGT
GATCAATCCCATATGATTCAAATGTTTCCACCGCAATTCGGCTCATCCAATTATCAAATT
CAATTTCCAAGTGGCAGCAATGGAGGCAGAATTGGAGGTACAAATGTAGGAGATTTATCG
CTTGCGGCGACAAGCAATGGTTCTTCACAGTGGCAATCCAATTTTCCTCCTCAGATATTT
GCAGCTGCTGCAGCATCATCAGGATTCCCTCAGCAGATAGTAAGACCTCAAAATTGGTCC
TCAGAAAATGGCTTCCATCACTCACTCAGGAGACCATCATGA