Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010158
CDS Infomation

pacid=37466407 polypeptide=PGSC0003DMP400007089 locus=PGSC0003DMG400003980 ID=PGSC0003DMT400010158.v4.03 annot-version=v4.03
Sequence

ATGGAGTGTGAAAATTTCCAACCAAATTACATTAATCCATATATTGAGTATAGCAACTTA
GAGACCACATTTTCTTGGAATAATCCTAGTATTATTAACCCTCAATGTTCAATCCAAGAT
TTTGTAACTATTGTTAATGATGTTGACATACTAGACTATTTCCAAAATGACTTCGATTTC
ATCGATGGAGATGTAGACATCCCCCTTCAAAACACGCAACAAGAAATTATTCAGGGAGAT
ACTGAACTCTCGAGAGAGGGTCAAAAATCACGTGTCTGCAATCCTCGTCTTGAATTCCTT
CAAGATCAGCTCATGGAGGAAACAAGTGTAACTGATCTTCTTCTTATGGGAGCTGAGGCT
ATTGAAGCTAGAAATCTTGATCTTGCTTCTATAGTTGTTTTGAGGCTAAATACAATACTT
TCTAATCAAGAAAACAGAGAAAATTCCCCTGTTGAAAGATTGGCTTTGTATTTTACACAA
GCCTTGTTATGCAAAACCTTGAATAATTCATCACATGAATTGTTGAATCAAAATCAAAAT
CAATATCAATCAGAGTTTACGTCTTCAATGACCGCGTTCCAAATGCTTCAAGAAATCTCC
CCTTATGTTAAGTTTGCTCATTTCACCGCGAACCAAGCGATTCTTGAAGCAACAAAAGGG
AGTGAACAAGTTCATATATTGGATTTTGACATCATGGAAGGCATTCAATGGCCTCCTTTG
ATGGTTGATTTGGTTGAAAGAGGAAACACAAATTCTTCTCTAAGGATCACATCACTTGTT
AGTGATCATTCAAACTCATGTCATGTACAAAAGACAGGCAAAAGACTTCAAGAATTTGCT
AATTCTATCAATCTTCCTTTCATGTTTGATCAAATCCTCTTAGAGGACTTAGAAAAAATA
CAAGTTGTTGTTGAGGGTCATAACAACTTAATAGCTAATGTTATGATCCACCAACTTCAC
ATGCCACAAAGGGGAAGTTCACTAGTCAAGACATTTTTCAATGGACTAAGAAAATTGTCC
CCTAAACTTGTTGTGTTAGTTGAAGAAGAGCTCTTCAATTTATCAAAAATCTCATCTATG
TCATTTGTTGAGTTCTTTTGTGAGGCTTTACATCATTACACAACAATATATGATTCAATT
CTTGGAGGTTTTGGTGGAGGATACATGTTAGCATTAAGGGTCATTGAGAAAGAATTTTTA
AGAGTTAGAATTTTGGACTCATTAAGACAATTCCCTAGTGATAAATTAGGAAGGGAGAAA
TGGAGTAAAGGGCTTTATTCATTAAAAGGTTTTAGACAAAGTCCAATGAGTTCAAGTAAT
GTGAGACAAGCTAAGCATTTGGTGAGTTTGTTTAGTGGAGGGTATTGGGTGCAAAATGAA
CAAAACAAATTGGCTTTGTGTTGGAAATCAAGGCCTTTAACAAGTGCTTCCATTTGGGTT
CCTGTATCATCAAGTTCTAGTCCTTCAAGTTCAATATCTTTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400007089
PEP Infomation

pacid=37466407 transcript=PGSC0003DMT400010158 locus=PGSC0003DMG400003980 ID=PGSC0003DMT400010158.v4.03 annot-version=v4.03
Sequence

MECENFQPNYINPYIEYSNLETTFSWNNPSIINPQCSIQDFVTIVNDVDILDYFQNDFDF
IDGDVDIPLQNTQQEIIQGDTELSREGQKSRVCNPRLEFLQDQLMEETSVTDLLLMGAEA
IEARNLDLASIVVLRLNTILSNQENRENSPVERLALYFTQALLCKTLNNSSHELLNQNQN
QYQSEFTSSMTAFQMLQEISPYVKFAHFTANQAILEATKGSEQVHILDFDIMEGIQWPPL
MVDLVERGNTNSSLRITSLVSDHSNSCHVQKTGKRLQEFANSINLPFMFDQILLEDLEKI
QVVVEGHNNLIANVMIHQLHMPQRGSSLVKTFFNGLRKLSPKLVVLVEEELFNLSKISSM
SFVEFFCEALHHYTTIYDSILGGFGGGYMLALRVIEKEFLRVRILDSLRQFPSDKLGREK
WSKGLYSLKGFRQSPMSSSNVRQAKHLVSLFSGGYWVQNEQNKLALCWKSRPLTSASIWV
PVSSSSSPSSSISF*

Transcript Sequence

Transcript ID

PGSC0003DMT400010158
Transcript Infomation

pacid=37466407 locus=PGSC0003DMG400003980 ID=PGSC0003DMT400010158.v4.03 annot-version=v4.03
Sequence

ATGGAGTGTGAAAATTTCCAACCAAATTACATTAATCCATATATTGAGTATAGCAACTTA
GAGACCACATTTTCTTGGAATAATCCTAGTATTATTAACCCTCAATGTTCAATCCAAGAT
TTTGTAACTATTGTTAATGATGTTGACATACTAGACTATTTCCAAAATGACTTCGATTTC
ATCGATGGAGATGTAGACATCCCCCTTCAAAACACGCAACAAGAAATTATTCAGGGAGAT
ACTGAACTCTCGAGAGAGGGTCAAAAATCACGTGTCTGCAATCCTCGTCTTGAATTCCTT
CAAGATCAGCTCATGGAGGAAACAAGTGTAACTGATCTTCTTCTTATGGGAGCTGAGGCT
ATTGAAGCTAGAAATCTTGATCTTGCTTCTATAGTTGTTTTGAGGCTAAATACAATACTT
TCTAATCAAGAAAACAGAGAAAATTCCCCTGTTGAAAGATTGGCTTTGTATTTTACACAA
GCCTTGTTATGCAAAACCTTGAATAATTCATCACATGAATTGTTGAATCAAAATCAAAAT
CAATATCAATCAGAGTTTACGTCTTCAATGACCGCGTTCCAAATGCTTCAAGAAATCTCC
CCTTATGTTAAGTTTGCTCATTTCACCGCGAACCAAGCGATTCTTGAAGCAACAAAAGGG
AGTGAACAAGTTCATATATTGGATTTTGACATCATGGAAGGCATTCAATGGCCTCCTTTG
ATGGTTGATTTGGTTGAAAGAGGAAACACAAATTCTTCTCTAAGGATCACATCACTTGTT
AGTGATCATTCAAACTCATGTCATGTACAAAAGACAGGCAAAAGACTTCAAGAATTTGCT
AATTCTATCAATCTTCCTTTCATGTTTGATCAAATCCTCTTAGAGGACTTAGAAAAAATA
CAAGTTGTTGTTGAGGGTCATAACAACTTAATAGCTAATGTTATGATCCACCAACTTCAC
ATGCCACAAAGGGGAAGTTCACTAGTCAAGACATTTTTCAATGGACTAAGAAAATTGTCC
CCTAAACTTGTTGTGTTAGTTGAAGAAGAGCTCTTCAATTTATCAAAAATCTCATCTATG
TCATTTGTTGAGTTCTTTTGTGAGGCTTTACATCATTACACAACAATATATGATTCAATT
CTTGGAGGTTTTGGTGGAGGATACATGTTAGCATTAAGGGTCATTGAGAAAGAATTTTTA
AGAGTTAGAATTTTGGACTCATTAAGACAATTCCCTAGTGATAAATTAGGAAGGGAGAAA
TGGAGTAAAGGGCTTTATTCATTAAAAGGTTTTAGACAAAGTCCAATGAGTTCAAGTAAT
GTGAGACAAGCTAAGCATTTGGTGAGTTTGTTTAGTGGAGGGTATTGGGTGCAAAATGAA
CAAAACAAATTGGCTTTGTGTTGGAAATCAAGGCCTTTAACAAGTGCTTCCATTTGGGTT
CCTGTATCATCAAGTTCTAGTCCTTCAAGTTCAATATCTTTTTAA