Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010120
CDS Infomation

pacid=37465090 polypeptide=PGSC0003DMP400007057 locus=PGSC0003DMG400003967 ID=PGSC0003DMT400010120.v4.03 annot-version=v4.03
Sequence

ATGAAACCCCTTTTTCCGAGACCCATTTTTACAATCTCGCTATTCACTAACACTATTACT
ACTACTACTACTGCAAACCCAAGAACCTGCTTTCAAATCGCTCATTTCAGTACAAATTTT
CAAAATCAAGGTCAATCTTCATACCCATCTCGGCGTCATGAAGAGGAGGGCCGTAATGTG
AAGGTATCAGTGTGGTGGGATTTCGAAAATTGCTCTCCTCCAGCTGGTGTTAATGTTTTC
AAGATTGCACAGAGTATTACTGCGGCTATTAGGGCAAATGGGATTAAGGGTCCTATAAAT
ATTACTGCTTTTGGTGATGTATTGCAGCTGTCTAGGATGAATCAGGAAGCGCTTTCTTCT
ACTGGGATTAATCTTGCTCACGTTCCTAATGGTGGAAAGAACAGTGCTGACAGGTCTCTC
CTTGTTGATCTGATGTATTGGGTTTCTCAAAATCCTCCGCCAGCACACCTTTTATTGATT
TCAGGTGACAGGGATTTTGCTGGAATATTACACAGGCTGAGAATGAACAACTACAACATT
CTGCTAGCTAGTCCAGAAAATACTCCTAGCGTTCTTTGTAGTGCAGCTAGTATCATGTGG
CAATGGAATGCATTACTGAAGGGTGAAAATCTTATAGGAAAGCATTTTAACCAGCCGCCA
GATGGTCCCTATGGTTCTTGGTATGGGCATTACAAAGCACCTCTTGATGACCCTTTTGCA
GTTACTGAACAACCCACAAATCTTCGTTCTGAGGAAGTTTCCGAAACTGTTTCAGAGCAG
AAATGTCGGCCCATTCCAAAGTCAATAGTGAGGCATATCCGCAATATTTTGAATTCTTAC
CCCAAAGGAGTTAGTATTACGGAACTTCGCGCAGAATTAGCAAGAAGCAATTTGAATATA
GACAAAGACTTGTACGGATATAAGAAGTTCTCTCGTTTTCTTTTGGCCATGCCAAATATT
TTAAAACTCCAGCTCGTAAGTGAGGGGAAATATTTGGTGCGGACCATCAACCCTAAAGTT
CCTGAACAGGGTGACAATTCAAGCATAAGTGTAGAGCCTGAAACTAATGGAGAGGCAGAA
TTTGCTGGTAATCCTATATTGAATGGTGAGACAGGCAGTTGTATAGAGGGTAAGAATGTA
CCTCAATCCCCTGAACGAAAAGTGAAAACATCCCTAAGAAAATTGCAGGGACCCCAGAGA
GCACAGGAGGCATGTACAGAAGTTCACCAGCCCCCACCTGAGAATGTGGTTGTTGAAGCA
AGTGAGGGTCAATTGCAGACTGCAGAGCAGCATGGTTCCGCACCTGAAATGGGCTTTTTG
AAAAGGTTATGGAATAGGTGGTTTGGGAACAAGGAGACTGTTTCTGGGGAAATGATCTTA
AATGTAAAGTCAAAAACTGCTGTAAAGGATGTAGAATTAAAGAGTCATTCTGAGCATTCG
GAGGGCTCCCCTTCTTTTGCTTCTGGTAATAAAACCAGTTCCAAAGATTTATCCTCTATG
CATTCTGAGGATACAACGGATAAGAGTAGCCAGCAGTCCAACCTTCTTAACAATATTAAG
AATTGGTGTAGATCTTGGAGAAGTTCCAATCTCTTGGAAGAAACAGGCTTAGAATCCCAT
GAAGAATTCAAGAAGACAGAACTTTGTCCTGAGGCAGAGGAATTATTTTCAAAGGAATCC
TTTTGGAGAGACCTGGGATCATTCTTAATTTCAAGCCATGGTTCAGTGCTTATCTTGCAA
TCAAGAACTAGGGCCAAGATGGCACAGAATCTCCAACAAGAAGGTCCTTCGTTTCTGAAT
TCTCTTAGTGAAGGTGATGCTCTTCGTCTGGTAGACTTGCTAATCTCAGATAAGAAATGG
GTGGATGAATGTCTTTCCCGAACCTTCCCTTACAAGCTCATTCAGCCAGCAGTCAAAGCT
TCAATCAACAGTAATTCTTCCAATTCGAATGGGTTGAGTTCTGTGTTTAGGAATACGAGA
GATGCATCTAATTTGAAGAGCTCACAAAAACTTGATGGCGAGAAAATACACCAAAATCCC
CCTCACACAGGAGTTTCTCGACCGGTCATTCAGGGCACTTGTTCTGGTAAGTCTAGAAAT
GAGATGCTTACTGACTGTCAGGAGCTGGTAGATGACATTGTAAAGCAATATCCAGAAGGA
TTCAACATGAATTCTTTCAGGTCTCTATTCCGTGAAAAGTATGGATATTTACTGGATGTA
AATAAGCTTGGCTACACAAAGTTAAGTAATCTTCTTCAGATAATGCCTGGGATAAAAATA
GAGTCTACTTACATTATTCCCTCTGCTAAAGTCCCGAAAAGTCCAGGTCTAAAAACAGAT
GAGCCGTCTGATCAAGAAAGTGATCTCAGTGTTACTGGAACCAATTTAGATAGCGAATCA
TCAAGTTTGCCTGGGAAAGATAACGAGTTTGATTCCCGTTGGGAGGAACTAGGTCCAGTG
TCTAAAGCAGGCCCTTCCAAGAATAGAATGAAACTGGGGTCTGATGGAGAAGCCAACGAT
GAATCAAGTGAACCAACACATGGAAACTATGAAGCCCCGTTGGATCGTGACTTCTCTGAT
TCCGATGAAGACACCTCATCATCCACAAAACTGGACACTGGTAAGTCGAAAATGAAGGAT
GAAGATAGCTCATTGTTACAGATTCTTGATTCATGGTACGGTAGAAAGGATGTTGATGGG
ACATTAGAATCTTCAACCGATGGTTCAAAATTAGATACATCAGTATCAGTTGACCAAATG
GAGAACTCTCCCACTGGGAGAAAGCACAAGACTTATTCATTTGTGACTGAACAACCTGTG
GACACTAAGGATAAGTTGATTGATGGTATATTGGGTAGCTTAAAGAAGTCAGGCGAGAAG
TCGCCTGAGACGAGGGTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400007057
PEP Infomation

pacid=37465090 transcript=PGSC0003DMT400010120 locus=PGSC0003DMG400003967 ID=PGSC0003DMT400010120.v4.03 annot-version=v4.03
Sequence

MKPLFPRPIFTISLFTNTITTTTTANPRTCFQIAHFSTNFQNQGQSSYPSRRHEEEGRNV
KVSVWWDFENCSPPAGVNVFKIAQSITAAIRANGIKGPINITAFGDVLQLSRMNQEALSS
TGINLAHVPNGGKNSADRSLLVDLMYWVSQNPPPAHLLLISGDRDFAGILHRLRMNNYNI
LLASPENTPSVLCSAASIMWQWNALLKGENLIGKHFNQPPDGPYGSWYGHYKAPLDDPFA
VTEQPTNLRSEEVSETVSEQKCRPIPKSIVRHIRNILNSYPKGVSITELRAELARSNLNI
DKDLYGYKKFSRFLLAMPNILKLQLVSEGKYLVRTINPKVPEQGDNSSISVEPETNGEAE
FAGNPILNGETGSCIEGKNVPQSPERKVKTSLRKLQGPQRAQEACTEVHQPPPENVVVEA
SEGQLQTAEQHGSAPEMGFLKRLWNRWFGNKETVSGEMILNVKSKTAVKDVELKSHSEHS
EGSPSFASGNKTSSKDLSSMHSEDTTDKSSQQSNLLNNIKNWCRSWRSSNLLEETGLESH
EEFKKTELCPEAEELFSKESFWRDLGSFLISSHGSVLILQSRTRAKMAQNLQQEGPSFLN
SLSEGDALRLVDLLISDKKWVDECLSRTFPYKLIQPAVKASINSNSSNSNGLSSVFRNTR
DASNLKSSQKLDGEKIHQNPPHTGVSRPVIQGTCSGKSRNEMLTDCQELVDDIVKQYPEG
FNMNSFRSLFREKYGYLLDVNKLGYTKLSNLLQIMPGIKIESTYIIPSAKVPKSPGLKTD
EPSDQESDLSVTGTNLDSESSSLPGKDNEFDSRWEELGPVSKAGPSKNRMKLGSDGEAND
ESSEPTHGNYEAPLDRDFSDSDEDTSSSTKLDTGKSKMKDEDSSLLQILDSWYGRKDVDG
TLESSTDGSKLDTSVSVDQMENSPTGRKHKTYSFVTEQPVDTKDKLIDGILGSLKKSGEK
SPETRV*

Transcript Sequence

Transcript ID

PGSC0003DMT400010120
Transcript Infomation

pacid=37465090 locus=PGSC0003DMG400003967 ID=PGSC0003DMT400010120.v4.03 annot-version=v4.03
Sequence

ATGAAACCCCTTTTTCCGAGACCCATTTTTACAATCTCGCTATTCACTAACACTATTACT
ACTACTACTACTGCAAACCCAAGAACCTGCTTTCAAATCGCTCATTTCAGTACAAATTTT
CAAAATCAAGGTCAATCTTCATACCCATCTCGGCGTCATGAAGAGGAGGGCCGTAATGTG
AAGGTATCAGTGTGGTGGGATTTCGAAAATTGCTCTCCTCCAGCTGGTGTTAATGTTTTC
AAGATTGCACAGAGTATTACTGCGGCTATTAGGGCAAATGGGATTAAGGGTCCTATAAAT
ATTACTGCTTTTGGTGATGTATTGCAGCTGTCTAGGATGAATCAGGAAGCGCTTTCTTCT
ACTGGGATTAATCTTGCTCACGTTCCTAATGGTGGAAAGAACAGTGCTGACAGGTCTCTC
CTTGTTGATCTGATGTATTGGGTTTCTCAAAATCCTCCGCCAGCACACCTTTTATTGATT
TCAGGTGACAGGGATTTTGCTGGAATATTACACAGGCTGAGAATGAACAACTACAACATT
CTGCTAGCTAGTCCAGAAAATACTCCTAGCGTTCTTTGTAGTGCAGCTAGTATCATGTGG
CAATGGAATGCATTACTGAAGGGTGAAAATCTTATAGGAAAGCATTTTAACCAGCCGCCA
GATGGTCCCTATGGTTCTTGGTATGGGCATTACAAAGCACCTCTTGATGACCCTTTTGCA
GTTACTGAACAACCCACAAATCTTCGTTCTGAGGAAGTTTCCGAAACTGTTTCAGAGCAG
AAATGTCGGCCCATTCCAAAGTCAATAGTGAGGCATATCCGCAATATTTTGAATTCTTAC
CCCAAAGGAGTTAGTATTACGGAACTTCGCGCAGAATTAGCAAGAAGCAATTTGAATATA
GACAAAGACTTGTACGGATATAAGAAGTTCTCTCGTTTTCTTTTGGCCATGCCAAATATT
TTAAAACTCCAGCTCGTAAGTGAGGGGAAATATTTGGTGCGGACCATCAACCCTAAAGTT
CCTGAACAGGGTGACAATTCAAGCATAAGTGTAGAGCCTGAAACTAATGGAGAGGCAGAA
TTTGCTGGTAATCCTATATTGAATGGTGAGACAGGCAGTTGTATAGAGGGTAAGAATGTA
CCTCAATCCCCTGAACGAAAAGTGAAAACATCCCTAAGAAAATTGCAGGGACCCCAGAGA
GCACAGGAGGCATGTACAGAAGTTCACCAGCCCCCACCTGAGAATGTGGTTGTTGAAGCA
AGTGAGGGTCAATTGCAGACTGCAGAGCAGCATGGTTCCGCACCTGAAATGGGCTTTTTG
AAAAGGTTATGGAATAGGTGGTTTGGGAACAAGGAGACTGTTTCTGGGGAAATGATCTTA
AATGTAAAGTCAAAAACTGCTGTAAAGGATGTAGAATTAAAGAGTCATTCTGAGCATTCG
GAGGGCTCCCCTTCTTTTGCTTCTGGTAATAAAACCAGTTCCAAAGATTTATCCTCTATG
CATTCTGAGGATACAACGGATAAGAGTAGCCAGCAGTCCAACCTTCTTAACAATATTAAG
AATTGGTGTAGATCTTGGAGAAGTTCCAATCTCTTGGAAGAAACAGGCTTAGAATCCCAT
GAAGAATTCAAGAAGACAGAACTTTGTCCTGAGGCAGAGGAATTATTTTCAAAGGAATCC
TTTTGGAGAGACCTGGGATCATTCTTAATTTCAAGCCATGGTTCAGTGCTTATCTTGCAA
TCAAGAACTAGGGCCAAGATGGCACAGAATCTCCAACAAGAAGGTCCTTCGTTTCTGAAT
TCTCTTAGTGAAGGTGATGCTCTTCGTCTGGTAGACTTGCTAATCTCAGATAAGAAATGG
GTGGATGAATGTCTTTCCCGAACCTTCCCTTACAAGCTCATTCAGCCAGCAGTCAAAGCT
TCAATCAACAGTAATTCTTCCAATTCGAATGGGTTGAGTTCTGTGTTTAGGAATACGAGA
GATGCATCTAATTTGAAGAGCTCACAAAAACTTGATGGCGAGAAAATACACCAAAATCCC
CCTCACACAGGAGTTTCTCGACCGGTCATTCAGGGCACTTGTTCTGGTAAGTCTAGAAAT
GAGATGCTTACTGACTGTCAGGAGCTGGTAGATGACATTGTAAAGCAATATCCAGAAGGA
TTCAACATGAATTCTTTCAGGTCTCTATTCCGTGAAAAGTATGGATATTTACTGGATGTA
AATAAGCTTGGCTACACAAAGTTAAGTAATCTTCTTCAGATAATGCCTGGGATAAAAATA
GAGTCTACTTACATTATTCCCTCTGCTAAAGTCCCGAAAAGTCCAGGTCTAAAAACAGAT
GAGCCGTCTGATCAAGAAAGTGATCTCAGTGTTACTGGAACCAATTTAGATAGCGAATCA
TCAAGTTTGCCTGGGAAAGATAACGAGTTTGATTCCCGTTGGGAGGAACTAGGTCCAGTG
TCTAAAGCAGGCCCTTCCAAGAATAGAATGAAACTGGGGTCTGATGGAGAAGCCAACGAT
GAATCAAGTGAACCAACACATGGAAACTATGAAGCCCCGTTGGATCGTGACTTCTCTGAT
TCCGATGAAGACACCTCATCATCCACAAAACTGGACACTGGTAAGTCGAAAATGAAGGAT
GAAGATAGCTCATTGTTACAGATTCTTGATTCATGGTACGGTAGAAAGGATGTTGATGGG
ACATTAGAATCTTCAACCGATGGTTCAAAATTAGATACATCAGTATCAGTTGACCAAATG
GAGAACTCTCCCACTGGGAGAAAGCACAAGACTTATTCATTTGTGACTGAACAACCTGTG
GACACTAAGGATAAGTTGATTGATGGTATATTGGGTAGCTTAAAGAAGTCAGGCGAGAAG
TCGCCTGAGACGAGGGTGTAG