Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010113
CDS Infomation

pacid=37466336 polypeptide=PGSC0003DMP400007054 locus=PGSC0003DMG400003964 ID=PGSC0003DMT400010113.v4.03 annot-version=v4.03
Sequence

ATGGCTGAGCTTGGGTATATTAGAAATGCGAAGAAATGCAGGGAGAAGTTTGAGAACATT
TATAAGTATCATAAGAGAACGAAAGATGGTAGATCTGGTAGACAAACTGGGAAAAACTAT
AGATTTTTCGAGCAATTAGAACTTTTAGATAGCCAATCCTTGTTTTCATCGCCTCCGTTA
AACCATAGCCAAATCAATAGAATGGATACAATGCCAGTGCCAATGCCTATGCCGATGACA
ATGATAAAACCAGCTGCTAGTGGATGTCAGGATTTTAGAATGGATCTTAGTCGAGTTCGG
GGTTTTAATCCGGAGTTCATGTCCACATCCACGTCCACGACCTCGTCCTCGGGGAAAGAA
TCCGATGGTAGTATGAAGAAGAAAAGGAAATTGGCTAGTTATTTTGAGAGGTTGATGAAG
GAAGTGTTGGACAAGCAAGAGGATTTGCAGAACAAGTTTCTAGAAGCAATGGAAAAATGT
GAGAAGGATAGGGTAGCGAGGGATGAGGCTTGGAAGATGAAGGAAATCGCGAGATTAAAG
AAAGAACAAGAAGCATTAACCCACGAAAGAGCAATTTCTGCTGCGAAAGACGCAGCAGTG
ATTGCTTTTTTGCAGAAAATCTCAGAGCAACCCATTCAACTACAGTTACCAACGGATTTA
CCCCAAGTATCCCATAGGCATACCGAGGAACGAGAGAGTGAATCAATGAAAACTATTGGA
AATCAAGAAAATGTTATGCAACAAGACAACGACAAGGAAAACATTGACAAACAAGAGATT
GACAGTGCTGGTGAGAATTCAAACTCGTTTCAAACGAATTCATCTTCTCGATGGCCTAAA
GCAGAAGTGGAAGCCTTAATCAAGCTAAGAACAAACGTCGACTTGCAATACCAAGACAAT
AATGGATCATCAAAAGGGCCTCTATGGGAAGACATCTCATGTGGTATGAAGAAGCTTGGA
TACGATAGAAACGCGAAGAGATGTAAAGAGAAATGGGAGAACATAAACAAGTATTACAGA
AGAGTTAAAGAAAGCCAAAAGAAAAGGCCAGAGGATTCAAAAACATGTCCTTATTTTCAT
CAATTGGATTCAATCTATCAAAACAAGTCCAAGAAACAATTGCCCATTATAGAAAATCCG
GGTTCCAATATGAAGGCCGGAGAGATACTAATGCAAATAATAAACCACCACCACCAACAA
CAACAGCAACAACAAGCATCAGAAAGAACAGAATGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400007054
PEP Infomation

pacid=37466336 transcript=PGSC0003DMT400010113 locus=PGSC0003DMG400003964 ID=PGSC0003DMT400010113.v4.03 annot-version=v4.03
Sequence

MAELGYIRNAKKCREKFENIYKYHKRTKDGRSGRQTGKNYRFFEQLELLDSQSLFSSPPL
NHSQINRMDTMPVPMPMPMTMIKPAASGCQDFRMDLSRVRGFNPEFMSTSTSTTSSSGKE
SDGSMKKKRKLASYFERLMKEVLDKQEDLQNKFLEAMEKCEKDRVARDEAWKMKEIARLK
KEQEALTHERAISAAKDAAVIAFLQKISEQPIQLQLPTDLPQVSHRHTEERESESMKTIG
NQENVMQQDNDKENIDKQEIDSAGENSNSFQTNSSSRWPKAEVEALIKLRTNVDLQYQDN
NGSSKGPLWEDISCGMKKLGYDRNAKRCKEKWENINKYYRRVKESQKKRPEDSKTCPYFH
QLDSIYQNKSKKQLPIIENPGSNMKAGEILMQIINHHHQQQQQQQASERTEC*

Transcript Sequence

Transcript ID

PGSC0003DMT400010113
Transcript Infomation

pacid=37466336 locus=PGSC0003DMG400003964 ID=PGSC0003DMT400010113.v4.03 annot-version=v4.03
Sequence

ATGGCTGAGCTTGGGTATATTAGAAATGCGAAGAAATGCAGGGAGAAGTTTGAGAACATT
TATAAGTATCATAAGAGAACGAAAGATGGTAGATCTGGTAGACAAACTGGGAAAAACTAT
AGATTTTTCGAGCAATTAGAACTTTTAGATAGCCAATCCTTGTTTTCATCGCCTCCGTTA
AACCATAGCCAAATCAATAGAATGGATACAATGCCAGTGCCAATGCCTATGCCGATGACA
ATGATAAAACCAGCTGCTAGTGGATGTCAGGATTTTAGAATGGATCTTAGTCGAGTTCGG
GGTTTTAATCCGGAGTTCATGTCCACATCCACGTCCACGACCTCGTCCTCGGGGAAAGAA
TCCGATGGTAGTATGAAGAAGAAAAGGAAATTGGCTAGTTATTTTGAGAGGTTGATGAAG
GAAGTGTTGGACAAGCAAGAGGATTTGCAGAACAAGTTTCTAGAAGCAATGGAAAAATGT
GAGAAGGATAGGGTAGCGAGGGATGAGGCTTGGAAGATGAAGGAAATCGCGAGATTAAAG
AAAGAACAAGAAGCATTAACCCACGAAAGAGCAATTTCTGCTGCGAAAGACGCAGCAGTG
ATTGCTTTTTTGCAGAAAATCTCAGAGCAACCCATTCAACTACAGTTACCAACGGATTTA
CCCCAAGTATCCCATAGGCATACCGAGGAACGAGAGAGTGAATCAATGAAAACTATTGGA
AATCAAGAAAATGTTATGCAACAAGACAACGACAAGGAAAACATTGACAAACAAGAGATT
GACAGTGCTGGTGAGAATTCAAACTCGTTTCAAACGAATTCATCTTCTCGATGGCCTAAA
GCAGAAGTGGAAGCCTTAATCAAGCTAAGAACAAACGTCGACTTGCAATACCAAGACAAT
AATGGATCATCAAAAGGGCCTCTATGGGAAGACATCTCATGTGGTATGAAGAAGCTTGGA
TACGATAGAAACGCGAAGAGATGTAAAGAGAAATGGGAGAACATAAACAAGTATTACAGA
AGAGTTAAAGAAAGCCAAAAGAAAAGGCCAGAGGATTCAAAAACATGTCCTTATTTTCAT
CAATTGGATTCAATCTATCAAAACAAGTCCAAGAAACAATTGCCCATTATAGAAAATCCG
GGTTCCAATATGAAGGCCGGAGAGATACTAATGCAAATAATAAACCACCACCACCAACAA
CAACAGCAACAACAAGCATCAGAAAGAACAGAATGTTGA