Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010107
CDS Infomation

pacid=37471016 polypeptide=PGSC0003DMP400007049 locus=PGSC0003DMG400003960 ID=PGSC0003DMT400010107.v4.03 annot-version=v4.03
Sequence

ATGACTCAATTGAAGCCCATTCTTACGCATTTGGATTCCATTCCTTCCACCCCAGGAAAG
TTTAAGCCTGATAAATCTTCACCCTATAATCTTTATCGTCTCCGTTTTCACCCTACTCTG
TTTCCCAGGTTTACTCTTTGGTCCTTTTTTTTCATCTTTTTCATCGTTTTGCTCATCTTT
TTCTCGTCTCCGACCAACCCCACCACCGGAAACAGCCGCCGGAGTCTGAAAAACTCTCTT
TCGCCATCTCCCCCGCTCGGCCCGAATTGGGAGCGTCGGGTTCGGGCCTCGGCCCGACCA
AGGTCTAAAACGGGCTTTACCGTTCTAGTCACTGGTGCTGCCGGTTTTGTGGGGACCCAT
GTGTCTCTAGGCCTGAAACGCCGTGGAGACGGCGTTTTGGGGCTGGATAATTTTAATCAG
TATTATGATGTCGGGCTGAAAAAAGCCCGACAGGGCCTTCTTGAACGTTCAGGGATTATG
GTAGTTGAGGGTGATATTAATGATGCTGTTTTGCTGAGGAAGCTGTTTGATGCTGTTGCT
TTTACACATGTCATGCATATGGCAGCTCAAGCTGGAGTTAGATATGCAATGCAGAATCCA
GCACTGGATACCGCGAAAAAGAGCACAGGGAGTGGGGGAAAGAAGAAGGGTGCAGCCCAA
TTGAGGATTTATAATTTAGGTAACACAAAGCCGGTGCCTGTTGGGAGACTTGTTAGTATT
TTGGAGAAGTTGTTGAAGGTTAAAGCAAAGAAGAAGGTTATCCAAATGCCGAGGAATGGG
GATGTGCCATTTACACATGCTAATATCACTTTGGCACATACGGAGCTGGGATATAAGCCC
ACTACTGATTTGGAAATGGGGTTAAAGAAGTTTGTGAAGTGGTATGTTAGCTACTATGGT
TCGAAGAAGAAGAAGAGTTCTTGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400007049
PEP Infomation

pacid=37471016 transcript=PGSC0003DMT400010107 locus=PGSC0003DMG400003960 ID=PGSC0003DMT400010107.v4.03 annot-version=v4.03
Sequence

MTQLKPILTHLDSIPSTPGKFKPDKSSPYNLYRLRFHPTLFPRFTLWSFFFIFFIVLLIF
FSSPTNPTTGNSRRSLKNSLSPSPPLGPNWERRVRASARPRSKTGFTVLVTGAAGFVGTH
VSLGLKRRGDGVLGLDNFNQYYDVGLKKARQGLLERSGIMVVEGDINDAVLLRKLFDAVA
FTHVMHMAAQAGVRYAMQNPALDTAKKSTGSGGKKKGAAQLRIYNLGNTKPVPVGRLVSI
LEKLLKVKAKKKVIQMPRNGDVPFTHANITLAHTELGYKPTTDLEMGLKKFVKWYVSYYG
SKKKKSSW*

Transcript Sequence

Transcript ID

PGSC0003DMT400010107
Transcript Infomation

pacid=37471016 locus=PGSC0003DMG400003960 ID=PGSC0003DMT400010107.v4.03 annot-version=v4.03
Sequence

ATGACTCAATTGAAGCCCATTCTTACGCATTTGGATTCCATTCCTTCCACCCCAGGAAAG
TTTAAGCCTGATAAATCTTCACCCTATAATCTTTATCGTCTCCGTTTTCACCCTACTCTG
TTTCCCAGGTTTACTCTTTGGTCCTTTTTTTTCATCTTTTTCATCGTTTTGCTCATCTTT
TTCTCGTCTCCGACCAACCCCACCACCGGAAACAGCCGCCGGAGTCTGAAAAACTCTCTT
TCGCCATCTCCCCCGCTCGGCCCGAATTGGGAGCGTCGGGTTCGGGCCTCGGCCCGACCA
AGGTCTAAAACGGGCTTTACCGTTCTAGTCACTGGTGCTGCCGGTTTTGTGGGGACCCAT
GTGTCTCTAGGCCTGAAACGCCGTGGAGACGGCGTTTTGGGGCTGGATAATTTTAATCAG
TATTATGATGTCGGGCTGAAAAAAGCCCGACAGGGCCTTCTTGAACGTTCAGGGATTATG
GTAGTTGAGGGTGATATTAATGATGCTGTTTTGCTGAGGAAGCTGTTTGATGCTGTTGCT
TTTACACATGTCATGCATATGGCAGCTCAAGCTGGAGTTAGATATGCAATGCAGAATCCA
GCACTGGATACCGCGAAAAAGAGCACAGGGAGTGGGGGAAAGAAGAAGGGTGCAGCCCAA
TTGAGGATTTATAATTTAGGTAACACAAAGCCGGTGCCTGTTGGGAGACTTGTTAGTATT
TTGGAGAAGTTGTTGAAGGTTAAAGCAAAGAAGAAGGTTATCCAAATGCCGAGGAATGGG
GATGTGCCATTTACACATGCTAATATCACTTTGGCACATACGGAGCTGGGATATAAGCCC
ACTACTGATTTGGAAATGGGGTTAAAGAAGTTTGTGAAGTGGTATGTTAGCTACTATGGT
TCGAAGAAGAAGAAGAGTTCTTGGTGA