Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010103
CDS Infomation

pacid=37469691 polypeptide=PGSC0003DMP400007045 locus=PGSC0003DMG400003958 ID=PGSC0003DMT400010103.v4.03 annot-version=v4.03
Sequence

ATGGGGGTTAATTATTTCCTCTTAACTTTCATTTTTGCTCTGTTTGTTCTTGAATTTTCT
TGCATAGAACCTGTTTGTGGAAATGCTGAGGTGAGAGCTTTGATGGAGATTAAATCAGCT
TTGGACCCAGAAAGCAAGAAACTTTCTTCATGGACAAGTGATGGTGATCCATGTAGTGGT
TCTTTTCTTGGTGTGATTTGTAATGAACATCATAAAGTAACAAATATTACTCTGACAGAT
AAAGGACTTACTGGAAAGTTGTCACCAGCAATTGCTGAGCTGAAGTGTTTGTCTGGTCTT
TACTTGCATTATAATTCTTTAACAGGGGAAATACCAAAGGAACTTGGGAATTTGACTGAG
TTGAATGATCTTTATCTCAATGTGAACAATCTTTCTGGGATTATACCACCAGAACTTAGA
AACATGGCAAGTCTACAAGTGCTGGACTTGAGTTGTAACCAGTTGACAGGGAGCATACCA
ACAGAGATTGGGTTCTTGAAGAAGTTGAGTGTTCTTGAATTGCAACGGAACAGGCTGACA
GATAAAATTCCAGAGAACTTAGGAGTCCTCGGGACGTTGAAAAAGCTATATTTGGGATTC
AATCAGCTATCTGGTCCGATTCCATTAAAATTAGCTGCTGCTCCCCAGTTGGAGGTTCTA
GAAGTACAAAATAACACCCTCTCTGGAGTTATTCCTCCAGCTCTAAGGAGATTAAATGAA
AAATTCAATTATGAAAGCAATCCTGGTTTATGTGGTACTGGATTTACTTCATTGAGAGTT
TGCACTGCCTGGGATCATGTCAATGTGAATCAAGTTGGTTCTGATGTACCTGATTCCAAT
AATAACGGTGTCCCTATAGATGTCCCAGGAGCTGCTCATATTAGTCCGTTGCCTTGTAAT
CAAACTCATTGTTCAAGATCATCAAAATTTCCTCAAGCAATTATCGTTGCTTCTGTGATT
ACAGTCACTGTAACTTTGGTAGTAGCTGTAGTTTTCGGTATATTTAGACGAAGAAGGCTA
AAACAAAGAGTAGGGAACACAAGTGATGCATCTGATGATAGGCTTAGCACTGATCAGGCA
AAGGAAATATACAAGAGAAGCCCTTCTCCACTACTTACTGTTGAGTACTCAAATCGTTGG
GACCCTATGACCCCTGAAAAGAGTTGCAATAGCATGTTCAATGAGTTCTTAAGTGGATTC
AAGTTCAATTTGGAAGAGGTTGAGTCTGCAACTCAGCATTTTACAGAGACAAATCTATTG
GGACGGAGCAATTTCTCTGCCGTCTATAAAGGAATTTTAAAAGATGGATCTACGGTAGCT
GTAAAAAGCATCAGCGTGACAAGCTGTAAGTCGGAGGAGACGGAGTTCATGGAAGGATTG
AGCTTATTAACCTCCCTGAAGCATGAAAACCTTGTCAAGCTAAGAGGTTTCTGTTGTTCA
AAGGGAAGAGGCGAGTGCTTTTTAATCTATGATTTGGCCTCTAAAGGGAACCTTTCTCAG
TATCTTGATGTTGAAGTAAACAGCAACCATGTTCTTGACTGGTCCAAAAGAGTTTCGATC
ATCAAGGGGATTGCAAAAGGACTAGGATATCTGCACAGCACCGAACCAGACAAACCTTCC
ATGGTTCATCGCAACATATCTGTGGAAAAAGTCCTCCTTGATCAACAGTTCACTCCACTA
ATACTGGACTGTGGCCTACTAAAGCTACTTGCTGATGATGTTGTTTATTCAGCACTTAAG
GTCAGTGCTGCACTAGGATATATGGCTCCTGAATATATTACAACTGGACGATTCACAGAA
AAGAGCGATGTATATGCATTTGGAGTAATTATCCTTCAAGTACTCTCTGGTAAAGGACTT
CTGGACTGCTCAATGAGACTTGCTGCTGAATCTTTTAACTTTGAGAACTTCATTGACCCT
AATCTCAAGGGAGCATTCTCCATAAGTGAAGCAACTATGCTAACTAAACTTGCAGTAAGT
TGCACCCTTGAGGATCCAGATAGCAGGCCAAGTATGGTTTTAGTAAATGAAGAATTGAAC
AGGTCTAGTTGTGGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400007045
PEP Infomation

pacid=37469691 transcript=PGSC0003DMT400010103 locus=PGSC0003DMG400003958 ID=PGSC0003DMT400010103.v4.03 annot-version=v4.03
Sequence

MGVNYFLLTFIFALFVLEFSCIEPVCGNAEVRALMEIKSALDPESKKLSSWTSDGDPCSG
SFLGVICNEHHKVTNITLTDKGLTGKLSPAIAELKCLSGLYLHYNSLTGEIPKELGNLTE
LNDLYLNVNNLSGIIPPELRNMASLQVLDLSCNQLTGSIPTEIGFLKKLSVLELQRNRLT
DKIPENLGVLGTLKKLYLGFNQLSGPIPLKLAAAPQLEVLEVQNNTLSGVIPPALRRLNE
KFNYESNPGLCGTGFTSLRVCTAWDHVNVNQVGSDVPDSNNNGVPIDVPGAAHISPLPCN
QTHCSRSSKFPQAIIVASVITVTVTLVVAVVFGIFRRRRLKQRVGNTSDASDDRLSTDQA
KEIYKRSPSPLLTVEYSNRWDPMTPEKSCNSMFNEFLSGFKFNLEEVESATQHFTETNLL
GRSNFSAVYKGILKDGSTVAVKSISVTSCKSEETEFMEGLSLLTSLKHENLVKLRGFCCS
KGRGECFLIYDLASKGNLSQYLDVEVNSNHVLDWSKRVSIIKGIAKGLGYLHSTEPDKPS
MVHRNISVEKVLLDQQFTPLILDCGLLKLLADDVVYSALKVSAALGYMAPEYITTGRFTE
KSDVYAFGVIILQVLSGKGLLDCSMRLAAESFNFENFIDPNLKGAFSISEATMLTKLAVS
CTLEDPDSRPSMVLVNEELNRSSCG*

Transcript Sequence

Transcript ID

PGSC0003DMT400010103
Transcript Infomation

pacid=37469691 locus=PGSC0003DMG400003958 ID=PGSC0003DMT400010103.v4.03 annot-version=v4.03
Sequence

ATGGGGGTTAATTATTTCCTCTTAACTTTCATTTTTGCTCTGTTTGTTCTTGAATTTTCT
TGCATAGAACCTGTTTGTGGAAATGCTGAGGTGAGAGCTTTGATGGAGATTAAATCAGCT
TTGGACCCAGAAAGCAAGAAACTTTCTTCATGGACAAGTGATGGTGATCCATGTAGTGGT
TCTTTTCTTGGTGTGATTTGTAATGAACATCATAAAGTAACAAATATTACTCTGACAGAT
AAAGGACTTACTGGAAAGTTGTCACCAGCAATTGCTGAGCTGAAGTGTTTGTCTGGTCTT
TACTTGCATTATAATTCTTTAACAGGGGAAATACCAAAGGAACTTGGGAATTTGACTGAG
TTGAATGATCTTTATCTCAATGTGAACAATCTTTCTGGGATTATACCACCAGAACTTAGA
AACATGGCAAGTCTACAAGTGCTGGACTTGAGTTGTAACCAGTTGACAGGGAGCATACCA
ACAGAGATTGGGTTCTTGAAGAAGTTGAGTGTTCTTGAATTGCAACGGAACAGGCTGACA
GATAAAATTCCAGAGAACTTAGGAGTCCTCGGGACGTTGAAAAAGCTATATTTGGGATTC
AATCAGCTATCTGGTCCGATTCCATTAAAATTAGCTGCTGCTCCCCAGTTGGAGGTTCTA
GAAGTACAAAATAACACCCTCTCTGGAGTTATTCCTCCAGCTCTAAGGAGATTAAATGAA
AAATTCAATTATGAAAGCAATCCTGGTTTATGTGGTACTGGATTTACTTCATTGAGAGTT
TGCACTGCCTGGGATCATGTCAATGTGAATCAAGTTGGTTCTGATGTACCTGATTCCAAT
AATAACGGTGTCCCTATAGATGTCCCAGGAGCTGCTCATATTAGTCCGTTGCCTTGTAAT
CAAACTCATTGTTCAAGATCATCAAAATTTCCTCAAGCAATTATCGTTGCTTCTGTGATT
ACAGTCACTGTAACTTTGGTAGTAGCTGTAGTTTTCGGTATATTTAGACGAAGAAGGCTA
AAACAAAGAGTAGGGAACACAAGTGATGCATCTGATGATAGGCTTAGCACTGATCAGGCA
AAGGAAATATACAAGAGAAGCCCTTCTCCACTACTTACTGTTGAGTACTCAAATCGTTGG
GACCCTATGACCCCTGAAAAGAGTTGCAATAGCATGTTCAATGAGTTCTTAAGTGGATTC
AAGTTCAATTTGGAAGAGGTTGAGTCTGCAACTCAGCATTTTACAGAGACAAATCTATTG
GGACGGAGCAATTTCTCTGCCGTCTATAAAGGAATTTTAAAAGATGGATCTACGGTAGCT
GTAAAAAGCATCAGCGTGACAAGCTGTAAGTCGGAGGAGACGGAGTTCATGGAAGGATTG
AGCTTATTAACCTCCCTGAAGCATGAAAACCTTGTCAAGCTAAGAGGTTTCTGTTGTTCA
AAGGGAAGAGGCGAGTGCTTTTTAATCTATGATTTGGCCTCTAAAGGGAACCTTTCTCAG
TATCTTGATGTTGAAGTAAACAGCAACCATGTTCTTGACTGGTCCAAAAGAGTTTCGATC
ATCAAGGGGATTGCAAAAGGACTAGGATATCTGCACAGCACCGAACCAGACAAACCTTCC
ATGGTTCATCGCAACATATCTGTGGAAAAAGTCCTCCTTGATCAACAGTTCACTCCACTA
ATACTGGACTGTGGCCTACTAAAGCTACTTGCTGATGATGTTGTTTATTCAGCACTTAAG
GTCAGTGCTGCACTAGGATATATGGCTCCTGAATATATTACAACTGGACGATTCACAGAA
AAGAGCGATGTATATGCATTTGGAGTAATTATCCTTCAAGTACTCTCTGGTAAAGGACTT
CTGGACTGCTCAATGAGACTTGCTGCTGAATCTTTTAACTTTGAGAACTTCATTGACCCT
AATCTCAAGGGAGCATTCTCCATAAGTGAAGCAACTATGCTAACTAAACTTGCAGTAAGT
TGCACCCTTGAGGATCCAGATAGCAGGCCAAGTATGGTTTTAGTAAATGAAGAATTGAAC
AGGTCTAGTTGTGGTTGA