Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010090
CDS Infomation

pacid=37467990 polypeptide=PGSC0003DMP400007033 locus=PGSC0003DMG400003952 ID=PGSC0003DMT400010090.v4.03 annot-version=v4.03
Sequence

ATGGCAGTAGCTCTTCCAACAACTTCTTCCTCATATCTACACTCTAAAACTAAAATCCCT
AAGTCTTCTTTAAGCTGCGCCAGCAAAGTTTATGTCGGATTAAGAATCCAATCTCCAGGT
TCTTATGGGGTTGCGACATCTAATTTAAATGTTGATTTTTTCAGCAGAGTTCACAAAAGT
ATTGAATCCGGAACTAAAGATGGCAAAGCAACACGTGCACAAGTTACCATGATGCCCATT
GGGACACCAAAGGTGCCCTATAGAAATCCAACTGACTCATCGTGGCAATGGGTTGATTTG
TGGAATGCTCTTTACCGCGAACGTGTTATTTTCATTGGAGAAGAGATAAATGAAGAATTT
AGCAACCAGATATTGGCAACAATGCTGTACCTTGACAGTATTGATAGTTCCAAGAAGCTC
TACATGTTTATCAATGGCCCTGGTGGTGATCTAACTCCAACCATGGCCATTTACGACACA
ATGCAAAGTCTGAAATGTGCTGTTGGTACCCACTGTGTGGGCTTTGCCTACAATCTTGCC
GCTTTTCTTCTTGCTGCTGGAGAAAAGGGCAATCGATGTGCAATGCCTCTTTCAAGGATT
GCATTAGAATCTCCAGCTGGAGCTGCACGCGGACAGGCTGACGATATCCGTAATGAAGCA
GAAGAACTTCTCAGAATTAGAAATTACCTTTTCAAGGAATTGTCTGAGAAGACAGGCCAG
CCTATTGAAAAGGTTCACAAGGATTTGAGTCGGGTGAAGCGATTCACTGCTAAAGAAGCT
CTTGAATATGGTCTTATTGACCGTATAGTTAGGCCTTCCCGTATCGACGGAGATGCTCCG
CCAAGGGATATCACAGCAGGTCTTGGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400007033
PEP Infomation

pacid=37467990 transcript=PGSC0003DMT400010090 locus=PGSC0003DMG400003952 ID=PGSC0003DMT400010090.v4.03 annot-version=v4.03
Sequence

MAVALPTTSSSYLHSKTKIPKSSLSCASKVYVGLRIQSPGSYGVATSNLNVDFFSRVHKS
IESGTKDGKATRAQVTMMPIGTPKVPYRNPTDSSWQWVDLWNALYRERVIFIGEEINEEF
SNQILATMLYLDSIDSSKKLYMFINGPGGDLTPTMAIYDTMQSLKCAVGTHCVGFAYNLA
AFLLAAGEKGNRCAMPLSRIALESPAGAARGQADDIRNEAEELLRIRNYLFKELSEKTGQ
PIEKVHKDLSRVKRFTAKEALEYGLIDRIVRPSRIDGDAPPRDITAGLG*

Transcript Sequence

Transcript ID

PGSC0003DMT400010090
Transcript Infomation

pacid=37467990 locus=PGSC0003DMG400003952 ID=PGSC0003DMT400010090.v4.03 annot-version=v4.03
Sequence

ATGGCAGTAGCTCTTCCAACAACTTCTTCCTCATATCTACACTCTAAAACTAAAATCCCT
AAGTCTTCTTTAAGCTGCGCCAGCAAAGTTTATGTCGGATTAAGAATCCAATCTCCAGGT
TCTTATGGGGTTGCGACATCTAATTTAAATGTTGATTTTTTCAGCAGAGTTCACAAAAGT
ATTGAATCCGGAACTAAAGATGGCAAAGCAACACGTGCACAAGTTACCATGATGCCCATT
GGGACACCAAAGGTGCCCTATAGAAATCCAACTGACTCATCGTGGCAATGGGTTGATTTG
TGGAATGCTCTTTACCGCGAACGTGTTATTTTCATTGGAGAAGAGATAAATGAAGAATTT
AGCAACCAGATATTGGCAACAATGCTGTACCTTGACAGTATTGATAGTTCCAAGAAGCTC
TACATGTTTATCAATGGCCCTGGTGGTGATCTAACTCCAACCATGGCCATTTACGACACA
ATGCAAAGTCTGAAATGTGCTGTTGGTACCCACTGTGTGGGCTTTGCCTACAATCTTGCC
GCTTTTCTTCTTGCTGCTGGAGAAAAGGGCAATCGATGTGCAATGCCTCTTTCAAGGATT
GCATTAGAATCTCCAGCTGGAGCTGCACGCGGACAGGCTGACGATATCCGTAATGAAGCA
GAAGAACTTCTCAGAATTAGAAATTACCTTTTCAAGGAATTGTCTGAGAAGACAGGCCAG
CCTATTGAAAAGGTTCACAAGGATTTGAGTCGGGTGAAGCGATTCACTGCTAAAGAAGCT
CTTGAATATGGTCTTATTGACCGTATAGTTAGGCCTTCCCGTATCGACGGAGATGCTCCG
CCAAGGGATATCACAGCAGGTCTTGGTTAA