Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010056
CDS Infomation

pacid=37471326 polypeptide=PGSC0003DMP400007010 locus=PGSC0003DMG400003939 ID=PGSC0003DMT400010056.v4.03 annot-version=v4.03
Sequence

ATGGGATTCTTGAAAATCCTTCTTATTTTCATCTTTTGCTCTTTCCCATGGCCTAGTGTT
CAGAGTGATTTCGAGACTTATATAGTCCATGTTGAATCCCCTGAAAGCCTGATTTCTACT
CAATCATCGTTAACGGATTTAGACAGTTATTACCTTTCTTTTTTGCCTAAAACTACTACC
GCAATTAGCTCGAGTGGAAATGAAGAGGCTGCTAGCATGATCTATTCCTATCACAATGTG
ATGAAAGGATTTTCAGCAAGATTAACTGCAGAACAAGTGAAGGAAATGGAGAAGAAACAT
GGCTTTGTCTCTGCTCAGAAACAGAGGATTTTGTCCTTGCATACTACTCATACTCCAAGC
TTTCTTGGTTTGCAACAGAATATGGGCTTGTGGAAGGATTCCAACTATGGGAAAGGCGTG
ATTATCGGAGTTATAGACACTGGAATTCATCCTGACCATCCTTCGTTTAGCGACGTTGGG
ATGCCTCCCCCACCTGCTAAGTGGAAAGGAGTTTGTGAGTCCAATTTCACCAACAAGTGT
AACAACAAGCTCATTGGAGCTAGGTCTTACCAACTTGCCAATGGTTCCCCTATAGATGAT
GATGGCCATGGTACGCACACAGCAAGCACAGCTGCAGGAGCCTTTGTGAAAGGTGCTAAT
GTATTTGGGAATGCTAATGGGACTGCTGTTGGTGTTGCCCCTCTTGCCCACATAGCCGTA
TATAAGGTGTGTAGTTCTCATGGTTGTTCTGAAAGTGATATTTTAGCTGCCATGGATGCA
GCTATAGATGATGGGGTAGATATTCTTTCAATCTCCCTTGGGGGAAGGCCAATCCCTTTC
TATGAAGACAGTATTGCTCTCGGGGCGTACAGTGCAACAGAAAGAGGCATTCTTGTTAGT
TGCTCAGCAGGCAATGGTGGTCCATTCAATGGCTCAGTAGCTAACTCAGCCCCGTGGATT
CTTTCTGTAGGTGCCAGCACACTTGATAGAAAGATAAAAGCTACTGTTAAGCTTGGAAAT
ACAGAGGAATTTGAAGGAGAATCTGCTTATCGTCCACAGATTTCCAACTCAACATTCTTT
ACTTTATTTGATGCTGGAAAAAATGCCAGTGATGAATTTGAAACCCCTTATTGCATACCA
GGGTCACTTACTGACCCTGCTATAAGAGGAAAGATGATCATTTGTTTGGCAGGTGGTGGC
GTTCTGAGTGTTGATAAAGGACAAGCTGTAAAGGATGCTGGAGGTGTTGGCATGATTATC
ATTAACCGGCCATATTATGGTGTCACTAAATCAGCTGATGCTCATGTTCTTCCAGCATTG
GATGTTTCAGATGCAGATGGAACAAAAATCCTTGCTTATATGAACTCAACATCAAACCCT
GTTGCTACAATCACATTCCAAGGAACAATAATTGGAGACGAAAATGCTCCTATAGTTGCT
GCATTTTCCTCAAGAGGACCAAGTAGAGCTAGTCCTGGCATCTTGAAACCTGACATAATC
GGTCCTGGTGTTAATATTCTTGCTGCTTGGCCTACCTCCGTGGATGACAACAAAAATACC
AAATCTACATTCAATATTATATCAGGCACCTCGATGTCTTGCCCTCACCTTAGTGGCGTA
GCAGCTCTGCTGAAGAGCACACATCCTGATTGGTCTCCTGCTGCTATTAAGTCTGCAATC
ATGACAACTGCTGACACGTTAAACCTTGCCAGTAGTCCAATACTAGACGAAAAGCTCCTT
CATGCTGACATTTTCGCAATTGGTGCAGGACATGTTAATCCATCAAGGGCAAATGATCCA
GGGCTAGTTTATGATACCCCATTCGAGGACTATCTACCTTATTTATGTGGTTTGAACTAT
ACAAATCGACAGGTAGGTAACCTGTTACAACGCAGGGTGAATTGCTCGGAGGTGAAAAGT
ATCCCTGAAGCACAATTAAACTATCCTTCATTTTCTGTATCCGAACTTGGATCAACTCCT
CAGACATATACCAGAACTGTGACCAACGTTGGTGATGCTACATCATCTTACAAAGTGGAG
GTAGCTTCACCAAAAGGCGTTGTCGTGGAAGTTGAACCCTCCGAGCTAAATTTCTCCGAG
TTGAACCAGAAGTTAACATACCAAGTAACATTTTCCAAGACAACTAGCAGCTCAAACATT
GAGGTTGCTGAGGGTTTCTTGAAGTGGACTTCTAATAGGCACTCAGTGAGAAGTCCAATT
GCAGTTGTGTTAGCCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400007010
PEP Infomation

pacid=37471326 transcript=PGSC0003DMT400010056 locus=PGSC0003DMG400003939 ID=PGSC0003DMT400010056.v4.03 annot-version=v4.03
Sequence

MGFLKILLIFIFCSFPWPSVQSDFETYIVHVESPESLISTQSSLTDLDSYYLSFLPKTTT
AISSSGNEEAASMIYSYHNVMKGFSARLTAEQVKEMEKKHGFVSAQKQRILSLHTTHTPS
FLGLQQNMGLWKDSNYGKGVIIGVIDTGIHPDHPSFSDVGMPPPPAKWKGVCESNFTNKC
NNKLIGARSYQLANGSPIDDDGHGTHTASTAAGAFVKGANVFGNANGTAVGVAPLAHIAV
YKVCSSHGCSESDILAAMDAAIDDGVDILSISLGGRPIPFYEDSIALGAYSATERGILVS
CSAGNGGPFNGSVANSAPWILSVGASTLDRKIKATVKLGNTEEFEGESAYRPQISNSTFF
TLFDAGKNASDEFETPYCIPGSLTDPAIRGKMIICLAGGGVLSVDKGQAVKDAGGVGMII
INRPYYGVTKSADAHVLPALDVSDADGTKILAYMNSTSNPVATITFQGTIIGDENAPIVA
AFSSRGPSRASPGILKPDIIGPGVNILAAWPTSVDDNKNTKSTFNIISGTSMSCPHLSGV
AALLKSTHPDWSPAAIKSAIMTTADTLNLASSPILDEKLLHADIFAIGAGHVNPSRANDP
GLVYDTPFEDYLPYLCGLNYTNRQVGNLLQRRVNCSEVKSIPEAQLNYPSFSVSELGSTP
QTYTRTVTNVGDATSSYKVEVASPKGVVVEVEPSELNFSELNQKLTYQVTFSKTTSSSNI
EVAEGFLKWTSNRHSVRSPIAVVLA*

Transcript Sequence

Transcript ID

PGSC0003DMT400010056
Transcript Infomation

pacid=37471326 locus=PGSC0003DMG400003939 ID=PGSC0003DMT400010056.v4.03 annot-version=v4.03
Sequence

ATGGGATTCTTGAAAATCCTTCTTATTTTCATCTTTTGCTCTTTCCCATGGCCTAGTGTT
CAGAGTGATTTCGAGACTTATATAGTCCATGTTGAATCCCCTGAAAGCCTGATTTCTACT
CAATCATCGTTAACGGATTTAGACAGTTATTACCTTTCTTTTTTGCCTAAAACTACTACC
GCAATTAGCTCGAGTGGAAATGAAGAGGCTGCTAGCATGATCTATTCCTATCACAATGTG
ATGAAAGGATTTTCAGCAAGATTAACTGCAGAACAAGTGAAGGAAATGGAGAAGAAACAT
GGCTTTGTCTCTGCTCAGAAACAGAGGATTTTGTCCTTGCATACTACTCATACTCCAAGC
TTTCTTGGTTTGCAACAGAATATGGGCTTGTGGAAGGATTCCAACTATGGGAAAGGCGTG
ATTATCGGAGTTATAGACACTGGAATTCATCCTGACCATCCTTCGTTTAGCGACGTTGGG
ATGCCTCCCCCACCTGCTAAGTGGAAAGGAGTTTGTGAGTCCAATTTCACCAACAAGTGT
AACAACAAGCTCATTGGAGCTAGGTCTTACCAACTTGCCAATGGTTCCCCTATAGATGAT
GATGGCCATGGTACGCACACAGCAAGCACAGCTGCAGGAGCCTTTGTGAAAGGTGCTAAT
GTATTTGGGAATGCTAATGGGACTGCTGTTGGTGTTGCCCCTCTTGCCCACATAGCCGTA
TATAAGGTGTGTAGTTCTCATGGTTGTTCTGAAAGTGATATTTTAGCTGCCATGGATGCA
GCTATAGATGATGGGGTAGATATTCTTTCAATCTCCCTTGGGGGAAGGCCAATCCCTTTC
TATGAAGACAGTATTGCTCTCGGGGCGTACAGTGCAACAGAAAGAGGCATTCTTGTTAGT
TGCTCAGCAGGCAATGGTGGTCCATTCAATGGCTCAGTAGCTAACTCAGCCCCGTGGATT
CTTTCTGTAGGTGCCAGCACACTTGATAGAAAGATAAAAGCTACTGTTAAGCTTGGAAAT
ACAGAGGAATTTGAAGGAGAATCTGCTTATCGTCCACAGATTTCCAACTCAACATTCTTT
ACTTTATTTGATGCTGGAAAAAATGCCAGTGATGAATTTGAAACCCCTTATTGCATACCA
GGGTCACTTACTGACCCTGCTATAAGAGGAAAGATGATCATTTGTTTGGCAGGTGGTGGC
GTTCTGAGTGTTGATAAAGGACAAGCTGTAAAGGATGCTGGAGGTGTTGGCATGATTATC
ATTAACCGGCCATATTATGGTGTCACTAAATCAGCTGATGCTCATGTTCTTCCAGCATTG
GATGTTTCAGATGCAGATGGAACAAAAATCCTTGCTTATATGAACTCAACATCAAACCCT
GTTGCTACAATCACATTCCAAGGAACAATAATTGGAGACGAAAATGCTCCTATAGTTGCT
GCATTTTCCTCAAGAGGACCAAGTAGAGCTAGTCCTGGCATCTTGAAACCTGACATAATC
GGTCCTGGTGTTAATATTCTTGCTGCTTGGCCTACCTCCGTGGATGACAACAAAAATACC
AAATCTACATTCAATATTATATCAGGCACCTCGATGTCTTGCCCTCACCTTAGTGGCGTA
GCAGCTCTGCTGAAGAGCACACATCCTGATTGGTCTCCTGCTGCTATTAAGTCTGCAATC
ATGACAACTGCTGACACGTTAAACCTTGCCAGTAGTCCAATACTAGACGAAAAGCTCCTT
CATGCTGACATTTTCGCAATTGGTGCAGGACATGTTAATCCATCAAGGGCAAATGATCCA
GGGCTAGTTTATGATACCCCATTCGAGGACTATCTACCTTATTTATGTGGTTTGAACTAT
ACAAATCGACAGGTAGGTAACCTGTTACAACGCAGGGTGAATTGCTCGGAGGTGAAAAGT
ATCCCTGAAGCACAATTAAACTATCCTTCATTTTCTGTATCCGAACTTGGATCAACTCCT
CAGACATATACCAGAACTGTGACCAACGTTGGTGATGCTACATCATCTTACAAAGTGGAG
GTAGCTTCACCAAAAGGCGTTGTCGTGGAAGTTGAACCCTCCGAGCTAAATTTCTCCGAG
TTGAACCAGAAGTTAACATACCAAGTAACATTTTCCAAGACAACTAGCAGCTCAAACATT
GAGGTTGCTGAGGGTTTCTTGAAGTGGACTTCTAATAGGCACTCAGTGAGAAGTCCAATT
GCAGTTGTGTTAGCCTAG