Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010020
CDS Infomation

pacid=37471139 polypeptide=PGSC0003DMP400006988 locus=PGSC0003DMG400003927 ID=PGSC0003DMT400010020.v4.03 annot-version=v4.03
Sequence

ATGGCGGATTGGTCGTTACTTCCATACGATCTACTTGTTACAATAGCAAATCGTGTTACA
GTTATGGAGGATTTCATTGTTTTTGGTGCCGTTTGTAAATCATGGCGAATTGCTGCTACC
AAAGAGAATTTTGATGGACCATTCCCACAACTTCCATTGCTTATGTTGGCTGTTGAAAGA
GACGACGCCAATGATTATCGTGAATTTTACTCTCTTTCGAAGGAGAAAATAACACGAGTA
TTTCTTCCAGAAGCTAGATCTAGAAATCGAGAATGTTTTTCAACAATGGGATGGATTGCC
ACCGTCGAATATACAGGTATCGGAGAGATGAAGTTATCGCACCCTTTTTCACATTCTCAA
ATTCATCTTCCTCCCCATATTGGTTTGAGAGATTGGGAACCAACTCATGAAAATAGCTAT
GTGTCTATCAATAAAATTATATTATCTGCTAATCCTTCGTTTTCGTCCGATTTTGTTGTG
ATTATTTCGTATAGTAGACATAAAAGTTATTTGGCTTGTTGGCGACCTGGAGATCTCTTT
TGGACTCCAATTGATGATGTTGATGAATTTGGTGAATTATGGGATATACACTACTTTAAT
GGACAGTTTTATATGATTACTTCTAGCGGAGTTTGGGTTATTGATGAGGATTATGAACCT
CAATTGGTTATTCAGAAAAACAATTATGGTCCGCGAAAGCAGCTCTATCTTGTCGAAGTA
TCAGGTGCACTGTTACTTGTTTCACAATTTTGTAAGCATGATAGTTTTTTTGGATCCTAT
ATGACCTATGACTTTCGAGTATGGAAACTCGATTTAATTAGACGTAAAGCAAAAGAGATT
AAAGTCTTGGGAGATAGTGCAATTTTTTTAGGGAAGAATGGATCATTTTCAATTGACACG
TCTAAGTCGAAAGGAGTGAAGCCTAATCACATCTATTTTACTGATAATTGGAAATACGGA
GATGGCAAAGATATGGGAGCTTACAACTTTGAAGATGGAAAAATTCAATCTTTTTATGTG
GGTGTTTCTGTTCATCCTATTTGCCCGGCAACTTGGGTTATCCCATCATTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400006988
PEP Infomation

pacid=37471139 transcript=PGSC0003DMT400010020 locus=PGSC0003DMG400003927 ID=PGSC0003DMT400010020.v4.03 annot-version=v4.03
Sequence

MADWSLLPYDLLVTIANRVTVMEDFIVFGAVCKSWRIAATKENFDGPFPQLPLLMLAVER
DDANDYREFYSLSKEKITRVFLPEARSRNRECFSTMGWIATVEYTGIGEMKLSHPFSHSQ
IHLPPHIGLRDWEPTHENSYVSINKIILSANPSFSSDFVVIISYSRHKSYLACWRPGDLF
WTPIDDVDEFGELWDIHYFNGQFYMITSSGVWVIDEDYEPQLVIQKNNYGPRKQLYLVEV
SGALLLVSQFCKHDSFFGSYMTYDFRVWKLDLIRRKAKEIKVLGDSAIFLGKNGSFSIDT
SKSKGVKPNHIYFTDNWKYGDGKDMGAYNFEDGKIQSFYVGVSVHPICPATWVIPSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400010020
Transcript Infomation

pacid=37471139 locus=PGSC0003DMG400003927 ID=PGSC0003DMT400010020.v4.03 annot-version=v4.03
Sequence

ATGGCGGATTGGTCGTTACTTCCATACGATCTACTTGTTACAATAGCAAATCGTGTTACA
GTTATGGAGGATTTCATTGTTTTTGGTGCCGTTTGTAAATCATGGCGAATTGCTGCTACC
AAAGAGAATTTTGATGGACCATTCCCACAACTTCCATTGCTTATGTTGGCTGTTGAAAGA
GACGACGCCAATGATTATCGTGAATTTTACTCTCTTTCGAAGGAGAAAATAACACGAGTA
TTTCTTCCAGAAGCTAGATCTAGAAATCGAGAATGTTTTTCAACAATGGGATGGATTGCC
ACCGTCGAATATACAGGTATCGGAGAGATGAAGTTATCGCACCCTTTTTCACATTCTCAA
ATTCATCTTCCTCCCCATATTGGTTTGAGAGATTGGGAACCAACTCATGAAAATAGCTAT
GTGTCTATCAATAAAATTATATTATCTGCTAATCCTTCGTTTTCGTCCGATTTTGTTGTG
ATTATTTCGTATAGTAGACATAAAAGTTATTTGGCTTGTTGGCGACCTGGAGATCTCTTT
TGGACTCCAATTGATGATGTTGATGAATTTGGTGAATTATGGGATATACACTACTTTAAT
GGACAGTTTTATATGATTACTTCTAGCGGAGTTTGGGTTATTGATGAGGATTATGAACCT
CAATTGGTTATTCAGAAAAACAATTATGGTCCGCGAAAGCAGCTCTATCTTGTCGAAGTA
TCAGGTGCACTGTTACTTGTTTCACAATTTTGTAAGCATGATAGTTTTTTTGGATCCTAT
ATGACCTATGACTTTCGAGTATGGAAACTCGATTTAATTAGACGTAAAGCAAAAGAGATT
AAAGTCTTGGGAGATAGTGCAATTTTTTTAGGGAAGAATGGATCATTTTCAATTGACACG
TCTAAGTCGAAAGGAGTGAAGCCTAATCACATCTATTTTACTGATAATTGGAAATACGGA
GATGGCAAAGATATGGGAGCTTACAACTTTGAAGATGGAAAAATTCAATCTTTTTATGTG
GGTGTTTCTGTTCATCCTATTTGCCCGGCAACTTGGGTTATCCCATCATTATGA