Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010011
CDS Infomation

pacid=37467610 polypeptide=PGSC0003DMP400006983 locus=PGSC0003DMG400003923 ID=PGSC0003DMT400010011.v4.03 annot-version=v4.03
Sequence

ATGGCTGTTCAAGCTCTCTCCACAGTGGCAGCAACTTCTAAGAGCATCAACCAGCTGAAT
TGCAGAGGACCCGATTCATTTCTCTGGACCAAAAACCCATTGGAACCGAAAAATCTGCAG
TGTCAATGGCTTGGTACTCCAATCAAATTCTCTCTTCAGTCCAAGAATTTTAAACAATTT
CTTTCAAAACAGTGCACCATTAGAGCAGATGTCTCCTTCGTCCTTCCCCGTGGGAAGCCG
GAGCCTACAGTACCTATAGAGAAAATTCCTAAATGGTCGGCGAAGGCGGTAAAATCATTT
ACCATGGCTGAACTGGAAGCAAGAAAACTTAAATATGCTACTACTGGAACAGAAGCTCTT
ATCCTGGGGATGTTGATTGAAGGGACGAATTTTGCTTCAAAATATTTGAGGGCGAACAGT
ATTACTCTCTTGAAATTTCGTGAAGAAACTATCAAAATAGTTGGAAAAGGGGACTTCTAC
TATTGCAGTCCCAAGGAACCTCCTTTGACTGAAGATGCGCAAAAGGCTCTTGATTGGGCC
TTTGATGAAAAACTCAAATCCGGTGACAGTAGGGAGATTACAACTACTCATGTGCTCCTT
GGAGTGTGGTCACAACAAGGATCACCAGGTTATAAGGTATTGGCTGCACTGGGCTTCAAT
GATGAAAAAGCTAAAGAATTGGAGAATGTAATTTCAGATCCTGGATTTGTTGATGATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400006983
PEP Infomation

pacid=37467610 transcript=PGSC0003DMT400010011 locus=PGSC0003DMG400003923 ID=PGSC0003DMT400010011.v4.03 annot-version=v4.03
Sequence

MAVQALSTVAATSKSINQLNCRGPDSFLWTKNPLEPKNLQCQWLGTPIKFSLQSKNFKQF
LSKQCTIRADVSFVLPRGKPEPTVPIEKIPKWSAKAVKSFTMAELEARKLKYATTGTEAL
ILGMLIEGTNFASKYLRANSITLLKFREETIKIVGKGDFYYCSPKEPPLTEDAQKALDWA
FDEKLKSGDSREITTTHVLLGVWSQQGSPGYKVLAALGFNDEKAKELENVISDPGFVDD*

Transcript Sequence

Transcript ID

PGSC0003DMT400010011
Transcript Infomation

pacid=37467610 locus=PGSC0003DMG400003923 ID=PGSC0003DMT400010011.v4.03 annot-version=v4.03
Sequence

ATGGCTGTTCAAGCTCTCTCCACAGTGGCAGCAACTTCTAAGAGCATCAACCAGCTGAAT
TGCAGAGGACCCGATTCATTTCTCTGGACCAAAAACCCATTGGAACCGAAAAATCTGCAG
TGTCAATGGCTTGGTACTCCAATCAAATTCTCTCTTCAGTCCAAGAATTTTAAACAATTT
CTTTCAAAACAGTGCACCATTAGAGCAGATGTCTCCTTCGTCCTTCCCCGTGGGAAGCCG
GAGCCTACAGTACCTATAGAGAAAATTCCTAAATGGTCGGCGAAGGCGGTAAAATCATTT
ACCATGGCTGAACTGGAAGCAAGAAAACTTAAATATGCTACTACTGGAACAGAAGCTCTT
ATCCTGGGGATGTTGATTGAAGGGACGAATTTTGCTTCAAAATATTTGAGGGCGAACAGT
ATTACTCTCTTGAAATTTCGTGAAGAAACTATCAAAATAGTTGGAAAAGGGGACTTCTAC
TATTGCAGTCCCAAGGAACCTCCTTTGACTGAAGATGCGCAAAAGGCTCTTGATTGGGCC
TTTGATGAAAAACTCAAATCCGGTGACAGTAGGGAGATTACAACTACTCATGTGCTCCTT
GGAGTGTGGTCACAACAAGGATCACCAGGTTATAAGGTATTGGCTGCACTGGGCTTCAAT
GATGAAAAAGCTAAAGAATTGGAGAATGTAATTTCAGATCCTGGATTTGTTGATGATTAA