Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400010000
CDS Infomation

pacid=37470627 polypeptide=PGSC0003DMP400006974 locus=PGSC0003DMG400003918 ID=PGSC0003DMT400010000.v4.03 annot-version=v4.03
Sequence

ATGACAAGGTCACGAGACCGTTCACCAACTAGAACAACAACAACAACCATTTCAACTGGC
GGCGCCGGCGGCAGAGACGGAGGAGGAGCCACGACGGCGATGAGGGTGATAGTACCCTTA
CAAGGTGTAGTTCAAGGTCGGGGTGGTCTTTTCTTAGGTTCAGTTATACCCTGTGCTCTT
TTCTATTTTTGGCAACTCTACCTAAAACGAAATCGTTCCTCCGGTGGTGACAATAACGGC
GAATCTACGGCTCCGGCGAGGTCAACGTCGTCGACCCATTTGCCGGAAGTGTCTTCTGGG
TCTGGGTTACAAAGGGTTCACTCACGTGTTTTACTGTCACCGAAGGGAACTACTGGGCAA
TCTCAGGTATCTGCTAGAGCTAATTCGATTATTTCAAAACAAATTGATAGTAGCCCTTAC
TATGTTGGATTGAAAAGAGCTTCTGAAGACCCTTATGATGAGTCAAGTAATCCAGATGGT
GTTATTCAGCTAGGATTAGCAGAAAACAAGTTGTCATTGGATTTAGTTCAAGAATGGCTT
GCAGAAAATGTGTCAAGATGGATGATGACTCAAGATTCGAGTATAACCGGAATAGCTACT
TATCAGCCATTTGATGGGTTGTTGGAGTTGAAAGTGGCTGTGGGAGAATTTATGTCTCAA
GCTCTGGAGAGATCAGTGTCCTTCAGCCCCTCGCAGATGGTTCTAACTGGTGGTGCCGCT
CCTGCGCTTGAGATACTGAGCTTCTGCCTAGCTGATCCTGGAAATGCTTTTCTTGTTCCC
TCACCATATTATCCTGATCTTGATAGGGATGTCAAATGGAGAACTGGAGTGGAGATTATA
CCTGTTCCTTGCCGCAGTGCAGACAACTTTAACTTGAGCATTGACGCTCTTGACCGAGCT
TTTAACCAAGCTAAGAAACGTGGCCTTAAAGTACGAGGGATTATCATTTCTAACCCCTCA
AATCCTGTGGGAAATATTTTCTCTAGGGAGACACTTTATAACCTCTTAGACTTTGCAACT
GAGAAGAACATCCATGTAATATCCAATGAAATCTTGGCAGGGTCAACTTATGGACGTGAA
GAATTTGTCAGCATAGCAGAGATAATTGATTCTGAAGATTTTGACAGGAGCAGGGTACAC
ATTGTGTATGGTCTCTCTAAGGACCTTTCTCTTCCTGGTTTCAGGGTGGGGGTCATATAT
TCTTGCAATGAAAATGTTCTAGCTGCTGCGAAAAAGTTGACAAGATTCTCATCCATTTCA
GCCCCAACACAGCATTTAATCATCCAGATGCTATCAGATGCAAAGTTTGTACAACAATTT
ATCAAAAAGAACAGAGAGAGGCTAAGAAAGATGTCTTCTCTATTTGTCAGTGGATTGAAG
CAGCTGGGAATTGAGTGCACCAAAAGTAGTGGGGGTTTCTATTGTTGGGCTGACATGAGC
AGGTTAATTCGGTCGTATAATGAGAAGGGTGAGATTGAGCTTTGGGATAATCTACTAAAT
GTAGCTAAGATCAATGCAACTCCTGGTTCTTCCTGCCACTGTGTTGAACCTGGGTGGTTC
AGGTTATGTTTTTCGACATTAAGTGAGAAGGACATTTCCACAGTTATGCAACGTATCCAG
AAAGTTTTGGAGTTACGTAAGTCTCTGAGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400006974
PEP Infomation

pacid=37470627 transcript=PGSC0003DMT400010000 locus=PGSC0003DMG400003918 ID=PGSC0003DMT400010000.v4.03 annot-version=v4.03
Sequence

MTRSRDRSPTRTTTTTISTGGAGGRDGGGATTAMRVIVPLQGVVQGRGGLFLGSVIPCAL
FYFWQLYLKRNRSSGGDNNGESTAPARSTSSTHLPEVSSGSGLQRVHSRVLLSPKGTTGQ
SQVSARANSIISKQIDSSPYYVGLKRASEDPYDESSNPDGVIQLGLAENKLSLDLVQEWL
AENVSRWMMTQDSSITGIATYQPFDGLLELKVAVGEFMSQALERSVSFSPSQMVLTGGAA
PALEILSFCLADPGNAFLVPSPYYPDLDRDVKWRTGVEIIPVPCRSADNFNLSIDALDRA
FNQAKKRGLKVRGIIISNPSNPVGNIFSRETLYNLLDFATEKNIHVISNEILAGSTYGRE
EFVSIAEIIDSEDFDRSRVHIVYGLSKDLSLPGFRVGVIYSCNENVLAAAKKLTRFSSIS
APTQHLIIQMLSDAKFVQQFIKKNRERLRKMSSLFVSGLKQLGIECTKSSGGFYCWADMS
RLIRSYNEKGEIELWDNLLNVAKINATPGSSCHCVEPGWFRLCFSTLSEKDISTVMQRIQ
KVLELRKSLS*

Transcript Sequence

Transcript ID

PGSC0003DMT400010000
Transcript Infomation

pacid=37470627 locus=PGSC0003DMG400003918 ID=PGSC0003DMT400010000.v4.03 annot-version=v4.03
Sequence

ATGACAAGGTCACGAGACCGTTCACCAACTAGAACAACAACAACAACCATTTCAACTGGC
GGCGCCGGCGGCAGAGACGGAGGAGGAGCCACGACGGCGATGAGGGTGATAGTACCCTTA
CAAGGTGTAGTTCAAGGTCGGGGTGGTCTTTTCTTAGGTTCAGTTATACCCTGTGCTCTT
TTCTATTTTTGGCAACTCTACCTAAAACGAAATCGTTCCTCCGGTGGTGACAATAACGGC
GAATCTACGGCTCCGGCGAGGTCAACGTCGTCGACCCATTTGCCGGAAGTGTCTTCTGGG
TCTGGGTTACAAAGGGTTCACTCACGTGTTTTACTGTCACCGAAGGGAACTACTGGGCAA
TCTCAGGTATCTGCTAGAGCTAATTCGATTATTTCAAAACAAATTGATAGTAGCCCTTAC
TATGTTGGATTGAAAAGAGCTTCTGAAGACCCTTATGATGAGTCAAGTAATCCAGATGGT
GTTATTCAGCTAGGATTAGCAGAAAACAAGTTGTCATTGGATTTAGTTCAAGAATGGCTT
GCAGAAAATGTGTCAAGATGGATGATGACTCAAGATTCGAGTATAACCGGAATAGCTACT
TATCAGCCATTTGATGGGTTGTTGGAGTTGAAAGTGGCTGTGGGAGAATTTATGTCTCAA
GCTCTGGAGAGATCAGTGTCCTTCAGCCCCTCGCAGATGGTTCTAACTGGTGGTGCCGCT
CCTGCGCTTGAGATACTGAGCTTCTGCCTAGCTGATCCTGGAAATGCTTTTCTTGTTCCC
TCACCATATTATCCTGATCTTGATAGGGATGTCAAATGGAGAACTGGAGTGGAGATTATA
CCTGTTCCTTGCCGCAGTGCAGACAACTTTAACTTGAGCATTGACGCTCTTGACCGAGCT
TTTAACCAAGCTAAGAAACGTGGCCTTAAAGTACGAGGGATTATCATTTCTAACCCCTCA
AATCCTGTGGGAAATATTTTCTCTAGGGAGACACTTTATAACCTCTTAGACTTTGCAACT
GAGAAGAACATCCATGTAATATCCAATGAAATCTTGGCAGGGTCAACTTATGGACGTGAA
GAATTTGTCAGCATAGCAGAGATAATTGATTCTGAAGATTTTGACAGGAGCAGGGTACAC
ATTGTGTATGGTCTCTCTAAGGACCTTTCTCTTCCTGGTTTCAGGGTGGGGGTCATATAT
TCTTGCAATGAAAATGTTCTAGCTGCTGCGAAAAAGTTGACAAGATTCTCATCCATTTCA
GCCCCAACACAGCATTTAATCATCCAGATGCTATCAGATGCAAAGTTTGTACAACAATTT
ATCAAAAAGAACAGAGAGAGGCTAAGAAAGATGTCTTCTCTATTTGTCAGTGGATTGAAG
CAGCTGGGAATTGAGTGCACCAAAAGTAGTGGGGGTTTCTATTGTTGGGCTGACATGAGC
AGGTTAATTCGGTCGTATAATGAGAAGGGTGAGATTGAGCTTTGGGATAATCTACTAAAT
GTAGCTAAGATCAATGCAACTCCTGGTTCTTCCTGCCACTGTGTTGAACCTGGGTGGTTC
AGGTTATGTTTTTCGACATTAAGTGAGAAGGACATTTCCACAGTTATGCAACGTATCCAG
AAAGTTTTGGAGTTACGTAAGTCTCTGAGTTAA