Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009999
CDS Infomation

pacid=37469344 polypeptide=PGSC0003DMP400006973 locus=PGSC0003DMG400003917 ID=PGSC0003DMT400009999.v4.03 annot-version=v4.03
Sequence

ATGAATGTAGGATCAAATTCTGTAGGAAACAATCATTTAGTTGATATCAATGAAGTCTTG
GATGAAGAGGAAGAGGATCACAATGAAGAAAACAGTAACATTTCAACCATAGCTGATAAA
CCAGACACGCGATTCAACAGGCCTACGAAAAATAGAGAAATAAAAAGGCCTCCTAGGAAA
TTCAGCAGGCAAGTTTCACTAGAGACAGGGTTCTCTGTACTCAATGGAGAGACATCTAAA
GATAAAAATGAGCGAAAAATACTCGGAAGAAGTGGAAAGAGTTTTGGAGGATTTGGTGTC
AATGGAACAACTGGTATTGAAGCAAGAAATAAAGGAGATTTCAACATGTTCAGGACTAAA
TCAACTATTGCTAGACAATCTTCAAAGATACCACTTAGAAAAGAAAGTGGAATTGAACTT
CAGAACAATAATGTTAAAGAAGGACTTAATGATCATGTCAAGAAAAGTGTACCTGCTGGA
AGATACTTTGATGCCCTTACAGGACCTGAACTTGATCAAGTCAAGGATTCCGAGGACATT
CTTCTTCCAAAAGATGAAAAATGGCCTTTTCTACTCAGGTTCCCAATTGGTTGCTTCGGT
ATCTGCCTAGGCCTTAGTAGTCAAGCCATCCTCTGGCGTTCTCTTGCTCTGAGTCCTGTC
ACAAAATTCCTCCATGTTCCACTTTTCATTAACTTCGCGGTTTGGCTGTTAGCCGTGGGG
GTTCTAGTTGCAGTCTTCATAACCTACATGTTCAAATGTGCTCTTTACTTTGAAGCTATA
AAGAGAGAGTACTTTCACCCAGTGAGAGTCAACTTCTTTTGTGCTCCATGGATTGTATGC
ATGTTTTTAGCTATTGGTGCACCACCTAAAACAGCACCAGGAACTCTTCACCCTGCCATC
TGGTGCGTCTTCATGGCCCCAATATTCTTCCTCAATCTCAAAATCTATGGCCAATGGCTG
TCAGGAGGGAAACGACGTCTCTGTAAAGTAGCCAACCCCTCATCTCACCTCTCTGTAATT
GGGAATTTCGTGGGAGCTATTTTGGCTGCTAAAGTGGGATGGAAGGAGCCTGGAAAGTTC
TTGTGGTCGATTGGCTTTGCACATTACCTTGTGGTGTTTGTCACATTATATCAAAGGTTG
CCAACGAGTGAAGCGTTGCCCAAGGAACTTCACCCTGTTTATTCCATGTTCATTGCCACT
CCAGCTGCAGCCAGCCTTGCTTGGGGTGCTATATATGATGAATTTGATGGCTTGGCAAGA
ACGTGCTACTTCATTTCATTATTTCTCTACTTATCATTGGTTGTACGTCCCAACTTCTTC
ACAGGATTCAAATTTTCAGTTGCATGGTGGTCATATACTTTTCCAATGACCACAGTTTCA
ATAGCAACCATAAAGTATGCAGAGGAGGTTCCTTCTTTCATTACCAAGGCTCTGGCGTTG
GCCCTTTCCTTCATGTCAACAACAATGGTCTGCATATTATTCGTCTCAACCCTTCTGCAT
GCTTTCGTTTGGAAAACCTTATTCCCCAATGATCTCGCCATTGCCATAACAAAGAAGAGA
TACAGCAAGGATAAGAAGCCTTTGATGAAGCGTTGGACAAAACATTCACCTCTTTCATTT
GTCACGTCAATAGGGAAACATAACTCAGGAGACAAAGAGTGCGCCTCTGAGGAGGAGAAA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400006973
PEP Infomation

pacid=37469344 transcript=PGSC0003DMT400009999 locus=PGSC0003DMG400003917 ID=PGSC0003DMT400009999.v4.03 annot-version=v4.03
Sequence

MNVGSNSVGNNHLVDINEVLDEEEEDHNEENSNISTIADKPDTRFNRPTKNREIKRPPRK
FSRQVSLETGFSVLNGETSKDKNERKILGRSGKSFGGFGVNGTTGIEARNKGDFNMFRTK
STIARQSSKIPLRKESGIELQNNNVKEGLNDHVKKSVPAGRYFDALTGPELDQVKDSEDI
LLPKDEKWPFLLRFPIGCFGICLGLSSQAILWRSLALSPVTKFLHVPLFINFAVWLLAVG
VLVAVFITYMFKCALYFEAIKREYFHPVRVNFFCAPWIVCMFLAIGAPPKTAPGTLHPAI
WCVFMAPIFFLNLKIYGQWLSGGKRRLCKVANPSSHLSVIGNFVGAILAAKVGWKEPGKF
LWSIGFAHYLVVFVTLYQRLPTSEALPKELHPVYSMFIATPAAASLAWGAIYDEFDGLAR
TCYFISLFLYLSLVVRPNFFTGFKFSVAWWSYTFPMTTVSIATIKYAEEVPSFITKALAL
ALSFMSTTMVCILFVSTLLHAFVWKTLFPNDLAIAITKKRYSKDKKPLMKRWTKHSPLSF
VTSIGKHNSGDKECASEEEK*

Transcript Sequence

Transcript ID

PGSC0003DMT400009999
Transcript Infomation

pacid=37469344 locus=PGSC0003DMG400003917 ID=PGSC0003DMT400009999.v4.03 annot-version=v4.03
Sequence

ATGAATGTAGGATCAAATTCTGTAGGAAACAATCATTTAGTTGATATCAATGAAGTCTTG
GATGAAGAGGAAGAGGATCACAATGAAGAAAACAGTAACATTTCAACCATAGCTGATAAA
CCAGACACGCGATTCAACAGGCCTACGAAAAATAGAGAAATAAAAAGGCCTCCTAGGAAA
TTCAGCAGGCAAGTTTCACTAGAGACAGGGTTCTCTGTACTCAATGGAGAGACATCTAAA
GATAAAAATGAGCGAAAAATACTCGGAAGAAGTGGAAAGAGTTTTGGAGGATTTGGTGTC
AATGGAACAACTGGTATTGAAGCAAGAAATAAAGGAGATTTCAACATGTTCAGGACTAAA
TCAACTATTGCTAGACAATCTTCAAAGATACCACTTAGAAAAGAAAGTGGAATTGAACTT
CAGAACAATAATGTTAAAGAAGGACTTAATGATCATGTCAAGAAAAGTGTACCTGCTGGA
AGATACTTTGATGCCCTTACAGGACCTGAACTTGATCAAGTCAAGGATTCCGAGGACATT
CTTCTTCCAAAAGATGAAAAATGGCCTTTTCTACTCAGGTTCCCAATTGGTTGCTTCGGT
ATCTGCCTAGGCCTTAGTAGTCAAGCCATCCTCTGGCGTTCTCTTGCTCTGAGTCCTGTC
ACAAAATTCCTCCATGTTCCACTTTTCATTAACTTCGCGGTTTGGCTGTTAGCCGTGGGG
GTTCTAGTTGCAGTCTTCATAACCTACATGTTCAAATGTGCTCTTTACTTTGAAGCTATA
AAGAGAGAGTACTTTCACCCAGTGAGAGTCAACTTCTTTTGTGCTCCATGGATTGTATGC
ATGTTTTTAGCTATTGGTGCACCACCTAAAACAGCACCAGGAACTCTTCACCCTGCCATC
TGGTGCGTCTTCATGGCCCCAATATTCTTCCTCAATCTCAAAATCTATGGCCAATGGCTG
TCAGGAGGGAAACGACGTCTCTGTAAAGTAGCCAACCCCTCATCTCACCTCTCTGTAATT
GGGAATTTCGTGGGAGCTATTTTGGCTGCTAAAGTGGGATGGAAGGAGCCTGGAAAGTTC
TTGTGGTCGATTGGCTTTGCACATTACCTTGTGGTGTTTGTCACATTATATCAAAGGTTG
CCAACGAGTGAAGCGTTGCCCAAGGAACTTCACCCTGTTTATTCCATGTTCATTGCCACT
CCAGCTGCAGCCAGCCTTGCTTGGGGTGCTATATATGATGAATTTGATGGCTTGGCAAGA
ACGTGCTACTTCATTTCATTATTTCTCTACTTATCATTGGTTGTACGTCCCAACTTCTTC
ACAGGATTCAAATTTTCAGTTGCATGGTGGTCATATACTTTTCCAATGACCACAGTTTCA
ATAGCAACCATAAAGTATGCAGAGGAGGTTCCTTCTTTCATTACCAAGGCTCTGGCGTTG
GCCCTTTCCTTCATGTCAACAACAATGGTCTGCATATTATTCGTCTCAACCCTTCTGCAT
GCTTTCGTTTGGAAAACCTTATTCCCCAATGATCTCGCCATTGCCATAACAAAGAAGAGA
TACAGCAAGGATAAGAAGCCTTTGATGAAGCGTTGGACAAAACATTCACCTCTTTCATTT
GTCACGTCAATAGGGAAACATAACTCAGGAGACAAAGAGTGCGCCTCTGAGGAGGAGAAA
TGA