Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009992
CDS Infomation

pacid=37467999 polypeptide=PGSC0003DMP400006966 locus=PGSC0003DMG400003913 ID=PGSC0003DMT400009992.v4.03 annot-version=v4.03
Sequence

ATGGGATTTTTGAAAATCTTTCTAATTTTCATCTTTTGCTCTTTCCCATGGCCTAGTATT
CAGAGTGATTTCGAGACTTATATAGTCCATGTTGAAAGCCAAATTTCTTCTCAATCATCG
TTAACGGATTTAGAGAGCTATTACCTTTCTTTTTTGCCTAAAAGTACTACAACAATTAGC
TCAAGTGGAAATGAAGAGGCTGCTAGCATGATCTACTCCTATCACAGTGTGATGAAAGGC
TTTGCAGCAAGATTAACTGCAGCACAAGTGAAGGAAATGGAGAAGAAACGCGGCTTTGTC
TCTGCTCAGAAACAGAGGATTTTGTCCTTGCATACTACTCATACTCCAAGTTTTCTTGGT
TTGCAACAGAACATTGGTGTATGGAAGGATTCAAACTATGGGAAAGGTGTGATCATCGGA
GATATAGACAATGGAATTTTTCCTGATCATCCTTCATTTAGCGATGTTGGGATGCCTCCT
CCGCCTGCTAAGTGGAATGGAGTTTGTGAGTCTAATTTCACTAACAAGTATAACAACAAG
CTTATTGGAGCGAGGTCTTACCAACTTGGCAATGGTTCCCCGATAGACGATACAGGACAT
GGTACACACATAGCAGGCACAGCTGCCGGAGCCTTTGTGAAAGGTGCTAATGTATTTGGG
AATGCTAATGGTACAGCGGTTGGTGTTGCCCCTCTTGCCCATATAGCCATATATAAGGTA
TGCAATTCTGATGGTTGTGCTGAAATTGATATCATAGCCGCTATGGATGCAGCTATAGCT
GATGGCGTAGATATTCTTTCTCTGTCTCTTGGTGAACGTAGTAGGCTTCCTTTCCATAGT
GATAATATTGCTCTCGGGGCGTATAGTGCAACAGAAAGAGGTATTCTTGTAAGTTGCTCT
GCAGGCAATAGTGGTCCATTCAGAGGCTCGGTAGAAAACACAGCCCCGTGGATTCTTACT
GTAGGCGCCAGCACTATTGATAGAAAGATGAAAGCTACTGTTAAGCTAGGAAATAGAGAG
GAATTTGAAGGAGAATCTGCTTATCATCCAAAGATTTCCAACTCAACATTCTTCACTCTA
TTTGATGCTGGAGAAAATATAAGTGATCAATCTGAAACCCCTTATTGCAAACCAGGGTCA
CTCAATGACACTGCTGTAAGAGGAAAGATAGTATTATGTTTGGCAGATGGTGGCGTTCCG
GGGGTTGATCAAGGACAAGCTGTAAAGGATGCTGGAGGTGTTGGCATGATTATCATCAAC
AGTCCAGATGACAGAGTCACTAAATCAGCTGATGCTCATGTTCTTCCAGCAATGGATGTT
TCAGCTGCAGATGGAACGAAAATTCGTGCCTATATGAACTCAACATCGAACCCTGTTGCT
ACAATCACATTCCAAGGAACGATAATTGGGGATAAAAATGCTCCTGCAGTTGCTTCATTT
TCTTCTCGCGGACCAAGTAGAGTTAGTCCTGGCATCTTGAAACCTGACATAATCGGTCCT
GGTGTTAATATCCTTGCTGCTTGGCCTACCTTCGTGGATGACAACAAAAACACCAAATCC
ACATTCAATATCATATCAGGCACCTCAATGGCTTGCCCTCATCTTAGTGGCGTAGCAGCT
CTGCTGAAGAGCGCACATCCTGATTGGTCTCCTGCTGCTATTAAGTCTGCAATTATGACA
ACCGCTGACACATTAAACCTTGCAAATAGTCCAATACTAGACGAAAGGCTCATTCCTGCT
GATATCTTTGCAATTGGTGCAGGACATGTTAATCCATCGAGGGCAAATGATCCAGGACTG
ATTTATGATACACCATTCGAGGACTATGTACCTTATTTATGTGGTTTGAAATACACAAGT
CGAGAGGTAGGTTACCTGTTACAACGCAAGGTGAAATGCTCGGAGGTAAAAAGTATCCCT
GAAGCACAACTAAATTATCCTTCATTTTCCATCAGACTTGGATCAACTCCTCAAACATAC
ACCAGAACTGTGACCAACGTTGGTGACGCCAAATCATCTTACAAGGTGGAAATAGCTTCA
CCAAAAGGCGTTGTCATGAAAGTTAAACCCTCCAAACTAAATTTCTCAATGCTGAATCAG
AAATTGACATACCAAGTGACATTTTCCAAGACAACCAACAGCTCAAACCCTGGGGTTATA
GAGGGATTCTTGAAGTGGACTTCTAACAGGCACTCTGTGAGAAGTCCAATTGCAATTGTG
TTATTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400006966
PEP Infomation

pacid=37467999 transcript=PGSC0003DMT400009992 locus=PGSC0003DMG400003913 ID=PGSC0003DMT400009992.v4.03 annot-version=v4.03
Sequence

MGFLKIFLIFIFCSFPWPSIQSDFETYIVHVESQISSQSSLTDLESYYLSFLPKSTTTIS
SSGNEEAASMIYSYHSVMKGFAARLTAAQVKEMEKKRGFVSAQKQRILSLHTTHTPSFLG
LQQNIGVWKDSNYGKGVIIGDIDNGIFPDHPSFSDVGMPPPPAKWNGVCESNFTNKYNNK
LIGARSYQLGNGSPIDDTGHGTHIAGTAAGAFVKGANVFGNANGTAVGVAPLAHIAIYKV
CNSDGCAEIDIIAAMDAAIADGVDILSLSLGERSRLPFHSDNIALGAYSATERGILVSCS
AGNSGPFRGSVENTAPWILTVGASTIDRKMKATVKLGNREEFEGESAYHPKISNSTFFTL
FDAGENISDQSETPYCKPGSLNDTAVRGKIVLCLADGGVPGVDQGQAVKDAGGVGMIIIN
SPDDRVTKSADAHVLPAMDVSAADGTKIRAYMNSTSNPVATITFQGTIIGDKNAPAVASF
SSRGPSRVSPGILKPDIIGPGVNILAAWPTFVDDNKNTKSTFNIISGTSMACPHLSGVAA
LLKSAHPDWSPAAIKSAIMTTADTLNLANSPILDERLIPADIFAIGAGHVNPSRANDPGL
IYDTPFEDYVPYLCGLKYTSREVGYLLQRKVKCSEVKSIPEAQLNYPSFSIRLGSTPQTY
TRTVTNVGDAKSSYKVEIASPKGVVMKVKPSKLNFSMLNQKLTYQVTFSKTTNSSNPGVI
EGFLKWTSNRHSVRSPIAIVLF*

Transcript Sequence

Transcript ID

PGSC0003DMT400009992
Transcript Infomation

pacid=37467999 locus=PGSC0003DMG400003913 ID=PGSC0003DMT400009992.v4.03 annot-version=v4.03
Sequence

ATGGGATTTTTGAAAATCTTTCTAATTTTCATCTTTTGCTCTTTCCCATGGCCTAGTATT
CAGAGTGATTTCGAGACTTATATAGTCCATGTTGAAAGCCAAATTTCTTCTCAATCATCG
TTAACGGATTTAGAGAGCTATTACCTTTCTTTTTTGCCTAAAAGTACTACAACAATTAGC
TCAAGTGGAAATGAAGAGGCTGCTAGCATGATCTACTCCTATCACAGTGTGATGAAAGGC
TTTGCAGCAAGATTAACTGCAGCACAAGTGAAGGAAATGGAGAAGAAACGCGGCTTTGTC
TCTGCTCAGAAACAGAGGATTTTGTCCTTGCATACTACTCATACTCCAAGTTTTCTTGGT
TTGCAACAGAACATTGGTGTATGGAAGGATTCAAACTATGGGAAAGGTGTGATCATCGGA
GATATAGACAATGGAATTTTTCCTGATCATCCTTCATTTAGCGATGTTGGGATGCCTCCT
CCGCCTGCTAAGTGGAATGGAGTTTGTGAGTCTAATTTCACTAACAAGTATAACAACAAG
CTTATTGGAGCGAGGTCTTACCAACTTGGCAATGGTTCCCCGATAGACGATACAGGACAT
GGTACACACATAGCAGGCACAGCTGCCGGAGCCTTTGTGAAAGGTGCTAATGTATTTGGG
AATGCTAATGGTACAGCGGTTGGTGTTGCCCCTCTTGCCCATATAGCCATATATAAGGTA
TGCAATTCTGATGGTTGTGCTGAAATTGATATCATAGCCGCTATGGATGCAGCTATAGCT
GATGGCGTAGATATTCTTTCTCTGTCTCTTGGTGAACGTAGTAGGCTTCCTTTCCATAGT
GATAATATTGCTCTCGGGGCGTATAGTGCAACAGAAAGAGGTATTCTTGTAAGTTGCTCT
GCAGGCAATAGTGGTCCATTCAGAGGCTCGGTAGAAAACACAGCCCCGTGGATTCTTACT
GTAGGCGCCAGCACTATTGATAGAAAGATGAAAGCTACTGTTAAGCTAGGAAATAGAGAG
GAATTTGAAGGAGAATCTGCTTATCATCCAAAGATTTCCAACTCAACATTCTTCACTCTA
TTTGATGCTGGAGAAAATATAAGTGATCAATCTGAAACCCCTTATTGCAAACCAGGGTCA
CTCAATGACACTGCTGTAAGAGGAAAGATAGTATTATGTTTGGCAGATGGTGGCGTTCCG
GGGGTTGATCAAGGACAAGCTGTAAAGGATGCTGGAGGTGTTGGCATGATTATCATCAAC
AGTCCAGATGACAGAGTCACTAAATCAGCTGATGCTCATGTTCTTCCAGCAATGGATGTT
TCAGCTGCAGATGGAACGAAAATTCGTGCCTATATGAACTCAACATCGAACCCTGTTGCT
ACAATCACATTCCAAGGAACGATAATTGGGGATAAAAATGCTCCTGCAGTTGCTTCATTT
TCTTCTCGCGGACCAAGTAGAGTTAGTCCTGGCATCTTGAAACCTGACATAATCGGTCCT
GGTGTTAATATCCTTGCTGCTTGGCCTACCTTCGTGGATGACAACAAAAACACCAAATCC
ACATTCAATATCATATCAGGCACCTCAATGGCTTGCCCTCATCTTAGTGGCGTAGCAGCT
CTGCTGAAGAGCGCACATCCTGATTGGTCTCCTGCTGCTATTAAGTCTGCAATTATGACA
ACCGCTGACACATTAAACCTTGCAAATAGTCCAATACTAGACGAAAGGCTCATTCCTGCT
GATATCTTTGCAATTGGTGCAGGACATGTTAATCCATCGAGGGCAAATGATCCAGGACTG
ATTTATGATACACCATTCGAGGACTATGTACCTTATTTATGTGGTTTGAAATACACAAGT
CGAGAGGTAGGTTACCTGTTACAACGCAAGGTGAAATGCTCGGAGGTAAAAAGTATCCCT
GAAGCACAACTAAATTATCCTTCATTTTCCATCAGACTTGGATCAACTCCTCAAACATAC
ACCAGAACTGTGACCAACGTTGGTGACGCCAAATCATCTTACAAGGTGGAAATAGCTTCA
CCAAAAGGCGTTGTCATGAAAGTTAAACCCTCCAAACTAAATTTCTCAATGCTGAATCAG
AAATTGACATACCAAGTGACATTTTCCAAGACAACCAACAGCTCAAACCCTGGGGTTATA
GAGGGATTCTTGAAGTGGACTTCTAACAGGCACTCTGTGAGAAGTCCAATTGCAATTGTG
TTATTCTAG