Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009990
CDS Infomation

pacid=37468015 polypeptide=PGSC0003DMP400006964 locus=PGSC0003DMG400003912 ID=PGSC0003DMT400009990.v4.03 annot-version=v4.03
Sequence

ATGGGATTCTTGAAAATTCTTCTTATCCTCATATTTTGCTCTTTCCTAAAGCCTAGTATT
CAGAGTGATCTCGAGACTTATATAGTCCATGTTGAATCACCTGAAAACCAAATTTCTAGT
CAATCATCGTTAACGGATTTAGAGAGCTATTACCTTTCTTTTTTGCCTAAAAGTACTAAC
GCAATTAGCTCGAGTGGAGATGAAGAGGCTGCTAGCATGATCTACTCCTACCATAATGTG
ATGAAAGGCTTTGCAGCAAGATTAACTGCAGCACAAGTGAAGGAAATGGAGAAGAAACAC
GGCTTTGTCTCTGCTCAGAAACAGAGGATTTTGTCCTTGCATACTACTCATACTCCAAGC
TTTCTTGGTTTGCAACAGAACATGGGCTTGTGGAAAGATTCCAATTTTGGAAAAGGTGTG
ATCATCGGAGTTCTAGACACTGGAATTCTTCCTGATCATCCTTCATTTAGTGATGTTGGG
ATGCCTCCCCCGCCTGCTAAGTGGAAAGGAGTTTGTGAGTCCAATTTCACCACAAAGTGT
AACAACAAGCTCATTGGAGCCAGGTCTTACCAACTTGGCAGCGGTTCCCCGATAGATGAT
AATGGACATGGTACTCATACAGCAGGCACAGCTGCAGGAGCCTTTGTGAAAGGTGCTAAT
GTATTTGGGAATGCTAATGGTACTGCTGTTGGTGTTGCTCCTCTTGCCCACATAGCGGTA
TATAAGGTATGTAGTTCTGATGGCGGTTGTTCTGACAGCGATATTTTAGCTGCCATGGAT
GCAGCTATAGATGATGGTGTAGATATTCTTTCAATCTCCCTTGGTGGAAGTACAAAACCT
TTCCATGATGATGGTATTGCTCTCGGGACGTATAGTGCAGCAGAAAGAGGGATTTTTGTA
AGTGCCGCTGCAGGCAATAGCGGTCCATCGGTTGGCACTGTAGCTAATGAAGCCCCGTGG
ATTCTCACTGTTGGTGCCAGTACTCATGATAGAAAACTGAAGGCTGCTGTTAAGCTTGGA
AATAGCGAGGAATTTGAAGGTGAATCTGCTTATCATCCAAAGACTTCCAACTCAACATTC
TTCACTCTATATGATGCTGGAAAGAATGAAAGTGATCAATTTAGCGCGCCTTTTTGCAGT
CCAGGCTCACTTAGTGACCCTGCTATCAAAGGTAAGATAGTCTTGTGTTTGCGAAGTAGA
AGTCTTCTTAAGGTTGATCAAGGACAATCCGTAAAGGATGCTGGAGGTGTTGGCATGATT
CTCATCAATGAACAGGAAGAGGGTGTGACTAAATCAGCTGAAGCTCATGTCCTTCCTGCA
TTGGATGTTTCAAATGCTGATGGAAAGAAAATTCTTGCCTATATGAACTCATCTTCAAAT
CCAGTTGCTTTAATCACCTTCCACGGAACTGTAATTGGAGATAAAAATGCTCCTATAGTT
GCTTCATTTTCCTCACGAGGACCAAGCGTAGCAAGTCCTGGCATCTTAAAACCTGACATA
ATCGGTCCTGGTGTTAATGTCCTTGCTGCTTGGCCTACCTCCGTGGATGACAACAAAAAC
ACAAAATCAACATTCAATATTATATCTGGAACCTCAATGTCTTGCCCTCACCTTAGTGGT
GTCGCAGCTCTGCTGAAGAGCGCACATCCTGATTGGTCTGCTGCAGCTATCAAGTCTGCA
ATCATGACAACCGCTGACACATTAAACCTCGCCAATAGTCCAATACTAGACGAAAGGCTC
ATTTCTGCGGATCTCTTTGCAATTGGTGCTGGACATGTTAATCCATCGAGAGCAAGTGAT
CCAGGACTAATTTATGATACACCATTCGAGGACTACGTTCCTTATTTATGTGGTTTGAAC
TACACAAATCGGGAGGTAGGTAAAGTGTTACAACGCAAGGTGAATTGCTCGGAGGTAAAA
AGTATCACTGAAGAGCAACTAAATTATCCTTCATTTTCCATCAGACTTGGATCAACTCCT
CAGACATATACCAGAACCGTGACCAATGTTGGTGATGCCAAATCATCTTACAAGGTGGAG
ATAGTTTCACCAAAAGGAGTTGTCGTGAAAGTTGAACCCTCCGCGCTAAATTTTTCAATG
TTGAACCAGAAGTTGACTTACCAAGTGACATTTACCAAGACAAGTAATATCTCAACTACC
AGTGATGTTGAGGGATTCTTGAAGTGGAATTCTAATAGGCACTCTGTAAGAAGTCCAATT
GCAGTTAGAGTGTCTGCTGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400006964
PEP Infomation

pacid=37468015 transcript=PGSC0003DMT400009990 locus=PGSC0003DMG400003912 ID=PGSC0003DMT400009990.v4.03 annot-version=v4.03
Sequence

MGFLKILLILIFCSFLKPSIQSDLETYIVHVESPENQISSQSSLTDLESYYLSFLPKSTN
AISSSGDEEAASMIYSYHNVMKGFAARLTAAQVKEMEKKHGFVSAQKQRILSLHTTHTPS
FLGLQQNMGLWKDSNFGKGVIIGVLDTGILPDHPSFSDVGMPPPPAKWKGVCESNFTTKC
NNKLIGARSYQLGSGSPIDDNGHGTHTAGTAAGAFVKGANVFGNANGTAVGVAPLAHIAV
YKVCSSDGGCSDSDILAAMDAAIDDGVDILSISLGGSTKPFHDDGIALGTYSAAERGIFV
SAAAGNSGPSVGTVANEAPWILTVGASTHDRKLKAAVKLGNSEEFEGESAYHPKTSNSTF
FTLYDAGKNESDQFSAPFCSPGSLSDPAIKGKIVLCLRSRSLLKVDQGQSVKDAGGVGMI
LINEQEEGVTKSAEAHVLPALDVSNADGKKILAYMNSSSNPVALITFHGTVIGDKNAPIV
ASFSSRGPSVASPGILKPDIIGPGVNVLAAWPTSVDDNKNTKSTFNIISGTSMSCPHLSG
VAALLKSAHPDWSAAAIKSAIMTTADTLNLANSPILDERLISADLFAIGAGHVNPSRASD
PGLIYDTPFEDYVPYLCGLNYTNREVGKVLQRKVNCSEVKSITEEQLNYPSFSIRLGSTP
QTYTRTVTNVGDAKSSYKVEIVSPKGVVVKVEPSALNFSMLNQKLTYQVTFTKTSNISTT
SDVEGFLKWNSNRHSVRSPIAVRVSAE*

Transcript Sequence

Transcript ID

PGSC0003DMT400009990
Transcript Infomation

pacid=37468015 locus=PGSC0003DMG400003912 ID=PGSC0003DMT400009990.v4.03 annot-version=v4.03
Sequence

ATGGGATTCTTGAAAATTCTTCTTATCCTCATATTTTGCTCTTTCCTAAAGCCTAGTATT
CAGAGTGATCTCGAGACTTATATAGTCCATGTTGAATCACCTGAAAACCAAATTTCTAGT
CAATCATCGTTAACGGATTTAGAGAGCTATTACCTTTCTTTTTTGCCTAAAAGTACTAAC
GCAATTAGCTCGAGTGGAGATGAAGAGGCTGCTAGCATGATCTACTCCTACCATAATGTG
ATGAAAGGCTTTGCAGCAAGATTAACTGCAGCACAAGTGAAGGAAATGGAGAAGAAACAC
GGCTTTGTCTCTGCTCAGAAACAGAGGATTTTGTCCTTGCATACTACTCATACTCCAAGC
TTTCTTGGTTTGCAACAGAACATGGGCTTGTGGAAAGATTCCAATTTTGGAAAAGGTGTG
ATCATCGGAGTTCTAGACACTGGAATTCTTCCTGATCATCCTTCATTTAGTGATGTTGGG
ATGCCTCCCCCGCCTGCTAAGTGGAAAGGAGTTTGTGAGTCCAATTTCACCACAAAGTGT
AACAACAAGCTCATTGGAGCCAGGTCTTACCAACTTGGCAGCGGTTCCCCGATAGATGAT
AATGGACATGGTACTCATACAGCAGGCACAGCTGCAGGAGCCTTTGTGAAAGGTGCTAAT
GTATTTGGGAATGCTAATGGTACTGCTGTTGGTGTTGCTCCTCTTGCCCACATAGCGGTA
TATAAGGTATGTAGTTCTGATGGCGGTTGTTCTGACAGCGATATTTTAGCTGCCATGGAT
GCAGCTATAGATGATGGTGTAGATATTCTTTCAATCTCCCTTGGTGGAAGTACAAAACCT
TTCCATGATGATGGTATTGCTCTCGGGACGTATAGTGCAGCAGAAAGAGGGATTTTTGTA
AGTGCCGCTGCAGGCAATAGCGGTCCATCGGTTGGCACTGTAGCTAATGAAGCCCCGTGG
ATTCTCACTGTTGGTGCCAGTACTCATGATAGAAAACTGAAGGCTGCTGTTAAGCTTGGA
AATAGCGAGGAATTTGAAGGTGAATCTGCTTATCATCCAAAGACTTCCAACTCAACATTC
TTCACTCTATATGATGCTGGAAAGAATGAAAGTGATCAATTTAGCGCGCCTTTTTGCAGT
CCAGGCTCACTTAGTGACCCTGCTATCAAAGGTAAGATAGTCTTGTGTTTGCGAAGTAGA
AGTCTTCTTAAGGTTGATCAAGGACAATCCGTAAAGGATGCTGGAGGTGTTGGCATGATT
CTCATCAATGAACAGGAAGAGGGTGTGACTAAATCAGCTGAAGCTCATGTCCTTCCTGCA
TTGGATGTTTCAAATGCTGATGGAAAGAAAATTCTTGCCTATATGAACTCATCTTCAAAT
CCAGTTGCTTTAATCACCTTCCACGGAACTGTAATTGGAGATAAAAATGCTCCTATAGTT
GCTTCATTTTCCTCACGAGGACCAAGCGTAGCAAGTCCTGGCATCTTAAAACCTGACATA
ATCGGTCCTGGTGTTAATGTCCTTGCTGCTTGGCCTACCTCCGTGGATGACAACAAAAAC
ACAAAATCAACATTCAATATTATATCTGGAACCTCAATGTCTTGCCCTCACCTTAGTGGT
GTCGCAGCTCTGCTGAAGAGCGCACATCCTGATTGGTCTGCTGCAGCTATCAAGTCTGCA
ATCATGACAACCGCTGACACATTAAACCTCGCCAATAGTCCAATACTAGACGAAAGGCTC
ATTTCTGCGGATCTCTTTGCAATTGGTGCTGGACATGTTAATCCATCGAGAGCAAGTGAT
CCAGGACTAATTTATGATACACCATTCGAGGACTACGTTCCTTATTTATGTGGTTTGAAC
TACACAAATCGGGAGGTAGGTAAAGTGTTACAACGCAAGGTGAATTGCTCGGAGGTAAAA
AGTATCACTGAAGAGCAACTAAATTATCCTTCATTTTCCATCAGACTTGGATCAACTCCT
CAGACATATACCAGAACCGTGACCAATGTTGGTGATGCCAAATCATCTTACAAGGTGGAG
ATAGTTTCACCAAAAGGAGTTGTCGTGAAAGTTGAACCCTCCGCGCTAAATTTTTCAATG
TTGAACCAGAAGTTGACTTACCAAGTGACATTTACCAAGACAAGTAATATCTCAACTACC
AGTGATGTTGAGGGATTCTTGAAGTGGAATTCTAATAGGCACTCTGTAAGAAGTCCAATT
GCAGTTAGAGTGTCTGCTGAATGA