Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009983
CDS Infomation

pacid=37468329 polypeptide=PGSC0003DMP400006959 locus=PGSC0003DMG400003906 ID=PGSC0003DMT400009983.v4.03 annot-version=v4.03
Sequence

ATGGCTATAAACTCCCAATTAGTGAGCACGGAAATTGGAAAAGATGGAATTGCAATTATC
AGAATTCGCAATCCTCCTGTTAATGCATTGGCACTTTCAGTGATAGATGGTTTGAAAGAG
CAATATGAAGAAGCTGTGGAACGAAACGATGTCAAAGCTATAGTTTTAACTGGAGATGAC
AAATTTTGTGGTGGTCTTGACATCAACATCATTCAGAAAGTTCAAAAGAATGGGGACACT
TCATTTCTACCGGATGCATCGGTTGAACTTGTGATTGACACAATTGAAAATGGGAAGAAG
CCTTCTGTTGCTGCTATTCAAGGATTTGCCCTTGGTGGTGGCTTAGAATTGGCTATGGGT
TGTAGTGCTAGAATAGCAACGTCGAGGGCTGAACTTGGTCTACCTGAACTGAAGCTTGGA
CTTATTCCTGGTTGTGGAGGCACTCAGCGTCTTCCACGGCTTGTTGGGACATCAAAGGCT
ATTGAGATGTTAATGTCATCCAAGATCATTACCTCAGAAGAAGGGAAGGAGTTGGGCATT
ATCGATGATGTGGTAGCTTCTCATGAAGACCTCTTAACATTTTCTCGTCTCTGGGCATTA
GATATTGCAGAAGGGCGGATAGCCCGTACTCATACACTTCGAAGGACAGATAAAATTGAA
CCTATACATAAGTCATCTGCTATCTTGGAAGTTAAAAGACAACAGGTTTTGAAGACTTCT
CCCCATTATAAAGCGTGCCTTGATGTGATAGAAGAAGGTATCATTTCTGGAGGATATGCT
GGTGTTTTAAAGGAAGACAAGGTTTTCAGAGAACTAGTACTCTCAAAATCTGCTAAAGCT
CTGCTGCATGCTTATTTTGCTGAACGTGCAACATCAAAGGTACCAGGCATTACCGACTGT
AAGCTTAAGCACCGGAAAATAGAGAAGGTTGCTGTTATTGGTGGTGGTTTAATGGGCTCT
GGTATTGCCACAGCTCTTATACTCAGTTCTATACAAGTCATTCTCAAAGAAATCAACTTC
GACTATCTGCAAAAGTCAGTCAAATCAATAGAAGTGAATCTCCACAGCCTGGTGAAAAGA
GGAGATTTGTTAGAGGAGAAAATGAAGAAGGCTTTTTCCCTCCTCAAAGGTGTTGTGGAC
TATGAAGAATTCACAGATGTAGACATGGTCATGGAGGTGGTAAATGAGGAAGTATTGTTG
AAGCAATCAATTTTTGAAGAAATTGAGAATATCTGTCATCCTCATTGCATATTCGCGTCA
AATACATCCACCATTGATCTTAATGTGATTGGAGCAAGGACAAAATCTCAGGATCGCATT
GTGGGCACACATTTATTCAGCCCTGCTCATGTGATGCCACTCTTGGAAATTGTACAGACG
GAAAACACCTCTAAACAAGTAATACTAGATGTCCTTAAATTTGCTAAGATCATCCAAAAA
GTTCCTATAGTGGTGAAAAACTGCACCGGTTTTGCTGTCAACCGGACATTTTTCCCATAC
ATGCAAGGAGCTGAGATATTGGCAAACTTAGGCATTGATGTTTACAGAATTGATCGAGTA
ATCACTGAATTTGGCATGCGAATTGGACCTTTCCAGCTTTTCGACTTGTCTGGATATAGT
ATATTTCTGGCAGTAGTCAAGGAGTTCGCTGCAGCATTTCCAGATCGCACTTTCCAGTGT
CCATTAGTTCAACTTATGATGGCAAATGGCAAGAAAAACGGACGAGGCTACTACTTATAT
AAGAAGGGAAAGATCCCTGAACCAGATCTCTCTGTGTTGCAAATAGTTGAAGAGTCAAGG
AGACTTGCAAGCATTATGCCGGGGGGAGAGCCAATATCTGTGATGGACCAAGAAATTGTG
GAAATGTTGTTTTTCCCTGTGGTCAATGAGGCATGCCGAGTAATTGAGGAAAGAGTTGTT
GTGAGAGCATCAGACCTTGATGTTGCTTCTGTCCATGGGATGAAGTTCCCTTCAGAGAGG
GGAGGTATTATGTATTGGGCAGATTCAATTGGAGCAGAGTACATATATGCAAGGCTGAAA
TATTGGTCAAAAGCATATGGTAGTTTCTTCAAGCCATCACAATTCTTGCAAGAAAGGGCC
ACCAAAGGCATACCATTGGCGGAACTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400006959
PEP Infomation

pacid=37468329 transcript=PGSC0003DMT400009983 locus=PGSC0003DMG400003906 ID=PGSC0003DMT400009983.v4.03 annot-version=v4.03
Sequence

MAINSQLVSTEIGKDGIAIIRIRNPPVNALALSVIDGLKEQYEEAVERNDVKAIVLTGDD
KFCGGLDINIIQKVQKNGDTSFLPDASVELVIDTIENGKKPSVAAIQGFALGGGLELAMG
CSARIATSRAELGLPELKLGLIPGCGGTQRLPRLVGTSKAIEMLMSSKIITSEEGKELGI
IDDVVASHEDLLTFSRLWALDIAEGRIARTHTLRRTDKIEPIHKSSAILEVKRQQVLKTS
PHYKACLDVIEEGIISGGYAGVLKEDKVFRELVLSKSAKALLHAYFAERATSKVPGITDC
KLKHRKIEKVAVIGGGLMGSGIATALILSSIQVILKEINFDYLQKSVKSIEVNLHSLVKR
GDLLEEKMKKAFSLLKGVVDYEEFTDVDMVMEVVNEEVLLKQSIFEEIENICHPHCIFAS
NTSTIDLNVIGARTKSQDRIVGTHLFSPAHVMPLLEIVQTENTSKQVILDVLKFAKIIQK
VPIVVKNCTGFAVNRTFFPYMQGAEILANLGIDVYRIDRVITEFGMRIGPFQLFDLSGYS
IFLAVVKEFAAAFPDRTFQCPLVQLMMANGKKNGRGYYLYKKGKIPEPDLSVLQIVEESR
RLASIMPGGEPISVMDQEIVEMLFFPVVNEACRVIEERVVVRASDLDVASVHGMKFPSER
GGIMYWADSIGAEYIYARLKYWSKAYGSFFKPSQFLQERATKGIPLAEL*

Transcript Sequence

Transcript ID

PGSC0003DMT400009983
Transcript Infomation

pacid=37468329 locus=PGSC0003DMG400003906 ID=PGSC0003DMT400009983.v4.03 annot-version=v4.03
Sequence

ATGGCTATAAACTCCCAATTAGTGAGCACGGAAATTGGAAAAGATGGAATTGCAATTATC
AGAATTCGCAATCCTCCTGTTAATGCATTGGCACTTTCAGTGATAGATGGTTTGAAAGAG
CAATATGAAGAAGCTGTGGAACGAAACGATGTCAAAGCTATAGTTTTAACTGGAGATGAC
AAATTTTGTGGTGGTCTTGACATCAACATCATTCAGAAAGTTCAAAAGAATGGGGACACT
TCATTTCTACCGGATGCATCGGTTGAACTTGTGATTGACACAATTGAAAATGGGAAGAAG
CCTTCTGTTGCTGCTATTCAAGGATTTGCCCTTGGTGGTGGCTTAGAATTGGCTATGGGT
TGTAGTGCTAGAATAGCAACGTCGAGGGCTGAACTTGGTCTACCTGAACTGAAGCTTGGA
CTTATTCCTGGTTGTGGAGGCACTCAGCGTCTTCCACGGCTTGTTGGGACATCAAAGGCT
ATTGAGATGTTAATGTCATCCAAGATCATTACCTCAGAAGAAGGGAAGGAGTTGGGCATT
ATCGATGATGTGGTAGCTTCTCATGAAGACCTCTTAACATTTTCTCGTCTCTGGGCATTA
GATATTGCAGAAGGGCGGATAGCCCGTACTCATACACTTCGAAGGACAGATAAAATTGAA
CCTATACATAAGTCATCTGCTATCTTGGAAGTTAAAAGACAACAGGTTTTGAAGACTTCT
CCCCATTATAAAGCGTGCCTTGATGTGATAGAAGAAGGTATCATTTCTGGAGGATATGCT
GGTGTTTTAAAGGAAGACAAGGTTTTCAGAGAACTAGTACTCTCAAAATCTGCTAAAGCT
CTGCTGCATGCTTATTTTGCTGAACGTGCAACATCAAAGGTACCAGGCATTACCGACTGT
AAGCTTAAGCACCGGAAAATAGAGAAGGTTGCTGTTATTGGTGGTGGTTTAATGGGCTCT
GGTATTGCCACAGCTCTTATACTCAGTTCTATACAAGTCATTCTCAAAGAAATCAACTTC
GACTATCTGCAAAAGTCAGTCAAATCAATAGAAGTGAATCTCCACAGCCTGGTGAAAAGA
GGAGATTTGTTAGAGGAGAAAATGAAGAAGGCTTTTTCCCTCCTCAAAGGTGTTGTGGAC
TATGAAGAATTCACAGATGTAGACATGGTCATGGAGGTGGTAAATGAGGAAGTATTGTTG
AAGCAATCAATTTTTGAAGAAATTGAGAATATCTGTCATCCTCATTGCATATTCGCGTCA
AATACATCCACCATTGATCTTAATGTGATTGGAGCAAGGACAAAATCTCAGGATCGCATT
GTGGGCACACATTTATTCAGCCCTGCTCATGTGATGCCACTCTTGGAAATTGTACAGACG
GAAAACACCTCTAAACAAGTAATACTAGATGTCCTTAAATTTGCTAAGATCATCCAAAAA
GTTCCTATAGTGGTGAAAAACTGCACCGGTTTTGCTGTCAACCGGACATTTTTCCCATAC
ATGCAAGGAGCTGAGATATTGGCAAACTTAGGCATTGATGTTTACAGAATTGATCGAGTA
ATCACTGAATTTGGCATGCGAATTGGACCTTTCCAGCTTTTCGACTTGTCTGGATATAGT
ATATTTCTGGCAGTAGTCAAGGAGTTCGCTGCAGCATTTCCAGATCGCACTTTCCAGTGT
CCATTAGTTCAACTTATGATGGCAAATGGCAAGAAAAACGGACGAGGCTACTACTTATAT
AAGAAGGGAAAGATCCCTGAACCAGATCTCTCTGTGTTGCAAATAGTTGAAGAGTCAAGG
AGACTTGCAAGCATTATGCCGGGGGGAGAGCCAATATCTGTGATGGACCAAGAAATTGTG
GAAATGTTGTTTTTCCCTGTGGTCAATGAGGCATGCCGAGTAATTGAGGAAAGAGTTGTT
GTGAGAGCATCAGACCTTGATGTTGCTTCTGTCCATGGGATGAAGTTCCCTTCAGAGAGG
GGAGGTATTATGTATTGGGCAGATTCAATTGGAGCAGAGTACATATATGCAAGGCTGAAA
TATTGGTCAAAAGCATATGGTAGTTTCTTCAAGCCATCACAATTCTTGCAAGAAAGGGCC
ACCAAAGGCATACCATTGGCGGAACTATAG