Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009946
CDS Infomation

pacid=37457291 polypeptide=PGSC0003DMP400006930 locus=PGSC0003DMG400003896 ID=PGSC0003DMT400009946.v4.03 annot-version=v4.03
Sequence

ATGGCGAAAATAAAACCACAAGCTCTTTTGCTGCAAAGCAAAAAGAAGAAGGGGCCAAGT
GGAATTAGTGTCCCTACGATTATTCTTTATGGATTAATCGTTGCTGTAATGGTGTTTTTC
CTGTTTGCTACTTATAGACACTGGTCTCGAAGGTCAATGATTCAGACACAGGATGACTTG
TCAAGTACTGAGGGTGAAAGTACATTTATTGAGCATAAGAGATCTGATGTCAATGGCCCT
ACATATGCTTCCATAACCACCTCAAAAGGATTGATAACTGTGGAACTTTACAAGGATGGT
TCTCCTGACATTGTTGAGGAATTTGTTGATTTCTGTCAGAAGGGCCACTTCAAAGGGATG
CGATTTAATCGTGTAATAAAGCACTTTGTAATCCATGGTAGTAAAGTTGATAAACCTGAA
GGTACAGAAGATTGGACTTCGAGGGGAAAACATTACAGTCGACTAGACACGAGCCTGAAG
CACGAAGCATTTATGCTTGGTACTTCAAAAACAAATCATGAAGGTGGAGGATTTGATCTG
TTTATAACAACTGCACCAATTCCAGATCTGAATGACAAGATCAATGTATTTGGGCGTGTA
ATAAAGGGAGAGGATATCGTGCAGGAAATTGAAGAGGTAGATACTGATGACCATTATCGA
CCCAAAACTCCCGTTCAGATCAACGAAGTGACTCTGAAATACAGCACTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400006930
PEP Infomation

pacid=37457291 transcript=PGSC0003DMT400009946 locus=PGSC0003DMG400003896 ID=PGSC0003DMT400009946.v4.03 annot-version=v4.03
Sequence

MAKIKPQALLLQSKKKKGPSGISVPTIILYGLIVAVMVFFLFATYRHWSRRSMIQTQDDL
SSTEGESTFIEHKRSDVNGPTYASITTSKGLITVELYKDGSPDIVEEFVDFCQKGHFKGM
RFNRVIKHFVIHGSKVDKPEGTEDWTSRGKHYSRLDTSLKHEAFMLGTSKTNHEGGGFDL
FITTAPIPDLNDKINVFGRVIKGEDIVQEIEEVDTDDHYRPKTPVQINEVTLKYST*

Transcript Sequence

Transcript ID

PGSC0003DMT400009946
Transcript Infomation

pacid=37457291 locus=PGSC0003DMG400003896 ID=PGSC0003DMT400009946.v4.03 annot-version=v4.03
Sequence

ATGGCGAAAATAAAACCACAAGCTCTTTTGCTGCAAAGCAAAAAGAAGAAGGGGCCAAGT
GGAATTAGTGTCCCTACGATTATTCTTTATGGATTAATCGTTGCTGTAATGGTGTTTTTC
CTGTTTGCTACTTATAGACACTGGTCTCGAAGGTCAATGATTCAGACACAGGATGACTTG
TCAAGTACTGAGGGTGAAAGTACATTTATTGAGCATAAGAGATCTGATGTCAATGGCCCT
ACATATGCTTCCATAACCACCTCAAAAGGATTGATAACTGTGGAACTTTACAAGGATGGT
TCTCCTGACATTGTTGAGGAATTTGTTGATTTCTGTCAGAAGGGCCACTTCAAAGGGATG
CGATTTAATCGTGTAATAAAGCACTTTGTAATCCATGGTAGTAAAGTTGATAAACCTGAA
GGTACAGAAGATTGGACTTCGAGGGGAAAACATTACAGTCGACTAGACACGAGCCTGAAG
CACGAAGCATTTATGCTTGGTACTTCAAAAACAAATCATGAAGGTGGAGGATTTGATCTG
TTTATAACAACTGCACCAATTCCAGATCTGAATGACAAGATCAATGTATTTGGGCGTGTA
ATAAAGGGAGAGGATATCGTGCAGGAAATTGAAGAGGTAGATACTGATGACCATTATCGA
CCCAAAACTCCCGTTCAGATCAACGAAGTGACTCTGAAATACAGCACTTGA