Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009926
CDS Infomation

pacid=37457104 polypeptide=PGSC0003DMP400006918 locus=PGSC0003DMG400003890 ID=PGSC0003DMT400009926.v4.03 annot-version=v4.03
Sequence

ATGGGAAGAGCTCCATGTTGTGATAAAGCAAATGTGAAGAAAGGGCCATGGTCACCTGAA
GAAGATGCAAAATTAAAAGAATATATTGACAAATTTGGCACTGGTGGAAATTGGATTGCT
CTTCCACAAAAAGCTGGGCTAAGAAGATGTGGAAAAAGCTGCAGATTAAGATGGCTAAAT
TATCTTAGGCCAAATATTAAACACGGAGAGTTTTCAGACGAAGAAGACAGAATCATTTGC
AGCCTTTATGGTAACATTGGAAGCAGGTGGTCAATAATAGCAGCTCAATTACCAGGCAGG
ACAGATAATGATATCAAAAACTATTGGAACACGAAGCTCAAGAAGAAATTAATGGGATTT
GTCTCTTCATCTCACAAGATCATTAGCCCTCTTAATCATTATCAGTATCAACACCAAATT
CCCACTAATTGTTACAATAATTATTCCTCACAAATTTCACTTCTTCAAGCTCCATCTTTA
TTAATCTCATCAAATTATCCCAACAACACAACTTTCCCATGCTATGAAACCAATATTCCT
AGTACAATTCCATCAAGTACAAGTTTCTTAAGCGCGGGTGCATCGACTAGTTGTACCTCA
GGCAATACCACTAGTACTTTCGCGGGTCCTACTACCCCTTCTGAAGAGAGTTATGACATT
TCGAATTTTAATTTTCATAGCTATATGTATAATAACAATGGTGCTATTAGTGAAGGAGAA
AAGTTGATTAGTGGAAATAATGGTGGTGGTTGTTATGTTGATGAGCAACAAAATCCATTA
GATTATAGTAGCTTGGAGGAGATTAAGGATCTAATTAGCACTAATCATGTTACTTGTAAT
AGCAATAACTTTTTGCTTGATCATGAGATCAAGACAGAAGAAAAAGTCATGATGTACTAT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400006918
PEP Infomation

pacid=37457104 transcript=PGSC0003DMT400009926 locus=PGSC0003DMG400003890 ID=PGSC0003DMT400009926.v4.03 annot-version=v4.03
Sequence

MGRAPCCDKANVKKGPWSPEEDAKLKEYIDKFGTGGNWIALPQKAGLRRCGKSCRLRWLN
YLRPNIKHGEFSDEEDRIICSLYGNIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMGF
VSSSHKIISPLNHYQYQHQIPTNCYNNYSSQISLLQAPSLLISSNYPNNTTFPCYETNIP
STIPSSTSFLSAGASTSCTSGNTTSTFAGPTTPSEESYDISNFNFHSYMYNNNGAISEGE
KLISGNNGGGCYVDEQQNPLDYSSLEEIKDLISTNHVTCNSNNFLLDHEIKTEEKVMMYY
*

Transcript Sequence

Transcript ID

PGSC0003DMT400009926
Transcript Infomation

pacid=37457104 locus=PGSC0003DMG400003890 ID=PGSC0003DMT400009926.v4.03 annot-version=v4.03
Sequence

ATGGGAAGAGCTCCATGTTGTGATAAAGCAAATGTGAAGAAAGGGCCATGGTCACCTGAA
GAAGATGCAAAATTAAAAGAATATATTGACAAATTTGGCACTGGTGGAAATTGGATTGCT
CTTCCACAAAAAGCTGGGCTAAGAAGATGTGGAAAAAGCTGCAGATTAAGATGGCTAAAT
TATCTTAGGCCAAATATTAAACACGGAGAGTTTTCAGACGAAGAAGACAGAATCATTTGC
AGCCTTTATGGTAACATTGGAAGCAGGTGGTCAATAATAGCAGCTCAATTACCAGGCAGG
ACAGATAATGATATCAAAAACTATTGGAACACGAAGCTCAAGAAGAAATTAATGGGATTT
GTCTCTTCATCTCACAAGATCATTAGCCCTCTTAATCATTATCAGTATCAACACCAAATT
CCCACTAATTGTTACAATAATTATTCCTCACAAATTTCACTTCTTCAAGCTCCATCTTTA
TTAATCTCATCAAATTATCCCAACAACACAACTTTCCCATGCTATGAAACCAATATTCCT
AGTACAATTCCATCAAGTACAAGTTTCTTAAGCGCGGGTGCATCGACTAGTTGTACCTCA
GGCAATACCACTAGTACTTTCGCGGGTCCTACTACCCCTTCTGAAGAGAGTTATGACATT
TCGAATTTTAATTTTCATAGCTATATGTATAATAACAATGGTGCTATTAGTGAAGGAGAA
AAGTTGATTAGTGGAAATAATGGTGGTGGTTGTTATGTTGATGAGCAACAAAATCCATTA
GATTATAGTAGCTTGGAGGAGATTAAGGATCTAATTAGCACTAATCATGTTACTTGTAAT
AGCAATAACTTTTTGCTTGATCATGAGATCAAGACAGAAGAAAAAGTCATGATGTACTAT
TGA