Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009924
CDS Infomation

pacid=37457684 polypeptide=PGSC0003DMP400006917 locus=PGSC0003DMG400003889 ID=PGSC0003DMT400009924.v4.03 annot-version=v4.03
Sequence

ATGTCACAAGATTCTGAGGAGATAAAAACCATTGAACATTGGAAATGGTCTGAAATGCAA
GGTGTTGAACTTGTTGTATCTGAAGACAAAAATTCAAACACCCCCACAACAACAACAACA
ACAACAACAAATAGTCATCAATTTGAAGAAACAAGAATGGAGGTTAAAAAAGAAGAAGGG
GGTGATGTGGAGAAGCCAAGTAGTCCACCACCAGCAGTTGGTTTTGGTGAACTTTTTAGA
TTTGCTGATGGTTTGGATTGTGTACTAATGATAATTGGTTCACTTGGTGCTTTTGTCCAT
GGATGTTCTTTGCCTTTGTTTCTTAGATTCTTTGCTGATCTTGTTAATTCTTTTGGCTCT
TATGCTAATGATGTTGATAAGATGACTCAAGAAGTTTTAAAGTATGCATTTTACTTTCTT
GTGGTGGGTGCTGCAATATGGGCATCTTCATGGGCAGAGATATCATGCTGGATGTGGACT
GGTGAGAGACAAACAACAAAGATGAGGATCAAATACTTAGAGGCTGCTTTGAACCAAGAT
ATTCAATATTTTGATACTGAAGTTAGAACTTCTGATGTTGTTTCTGCAATTAACACTGAT
GCTGTAGTGGTCCAAGAAGCCATTAGTGAGAAGTTGGGCAATTTCATTCATTATATGGCT
ACATTTTTGTCTGGATTTGTGGTGGGATTTACAGCAGTATGGCAATTAGCTCTAGTTACT
CTTGCTGTAGTTCCACTTATTGCTGTAATTGGTGCTATCTACACTGTGACATCAGCCAAA
TTGTCAAGTCAAAGTCAAGAAGCACTTTCAAAGGCAGGGAACATTGTTGAACAGACAGTA
GTTCAAATTCGGACGGTATTGGTGTTTGTTGGTGAGGCAAAAGCATTGCAAGCATACACA
GCAGCACTTAGAGTTTCTCAAAAGATTGGATATAAGAGTGGATTTTCAAAAGGATTAGGA
CTTGGAGCTACATATTTTACTGTTTTCTGTTGTTATGCTCTTCTTTTATGGTATGGGGGC
TATTTAGTTAGACATCATTTCACCAATGGAGGTCTTGCCATAGCAACAATGTTTGCAGTC
ATGATTGGTGGATTGGCATTGGGACAATCTGCCCCTAGCATGACTGCATTTGCAAAAGCT
AGAGTTGCAGCTGCCAAGATTTTCCGGATTATCGATCATAAGCCAAGCGTCGACAGAAAC
GCCAAGACGGGGTTGGAGTTAGACACTGTTAGTGGCCAGCTAGAGCTTAAGAATGTCGAG
TTCTCTTATCCTTCAAGGCCTGAAATCAAGATTCTCAACAATTTCAACCTCGTTGTTCCA
GCTGGAAAGACCATCGCTTTAGTCGGAAGCAGTGGTTCGGGGAAAAGCACTGTGGTATCC
CTTATCGAAAGATTTTATGATCCCACCTCAGGACAACTTATGCTTGATGGAAATGACATA
AAGACACTGAAATTGAAATGGCTAAGGCAGCAAATTGGCCTTGTAAGCCAAGAACCAGCA
CTTTTCGCAACAAGCATCAAAGAAAACATACTATTAGGAAGGCCAGATGCAACACAAATT
GAGATCGAAGAAGCTGCTAGAGTTGCCAATGCCCATTCTTTCGTAATCAAACTTCCTGAT
GGCTTTGATACTCAGGTAGGGGAGAGAGGATTACAATTATCGGGTGGACAGAAGCAGAGG
ATTGCTATAGCAAGGGCCATGCTTAAAAACCCGGCCATCCTTCTTTTAGATGAAGCAACT
AGTGCTTTAGATTCTGAATCGGAAAAACTAGTGCAGGAGGCTCTAGACAGGTTCATGATC
GGACGAACGACTCTTGTGATTGCTCATCGGCTGTCTACTATCCGGAAGGCTGACCTGGTG
GCTGTACTACAACAAGGCAGTGTCTCGGAGATTGGAAGCCACGATGAGCTTATGAGTAAA
GGAGAGAATGGTATGTATGCCAAGCTCATCAAAATGCAAGAAGCAGCTCATGAAACCGCT
CTTAGTAATGCCAGAAAGAGCAGTGCAAGGCCCTCGAGTGCAAGGAACTCCGTAAGCTCA
CCAATCATCACTAGAAACTCTTCCTATGGTCGATCACCATACTCCCGCCGGTTGTCTGAC
TTTTCTACCTCGGACTTCAGCCTCTCCCTTGATGCTGCATATTCTAATTACCGAAATGAA
AAGCTTGCATTCAAGGACCAAGCTAGTTCGTTTGGCCGGCTTGCAAAAATGAACTCTCCT
GAGTGGACTTATGCTTTAATTGGTTCTATAGGCTCTGTCATCTGTGGTTCACTTAGTGCT
TTCTTTGCATACGTCTTGAGTGCTGTTCTTAGCGTGTACTACAATCCGGATCATGCTTAC
ATGAGCAAACAAATTGCGAAATACTGTTATCTTTTGATTGGAGTTTCATCAGCTGCACTC
ATTTTTAACACTCTACAACATTACTACTGGGATGTAGTGGGGGAGAATTTGACAAAACGG
GTGAGAGAGAAAATGCTGGCAGCAGTGCTTAAAATGGAAATGGCGTGGTTCGATCAGGAA
GAGAACGATAGTTCAAGAATTGCAGCTAGGCTCTCTCTGGATGCCAACAATGTTAGGTCA
GCCATCGGGGATAGAATCTCCGTCATTATGCAGAACTCAGCTCTCATGCTAGTCGCATGC
ACTGCAGGATTCGTATTGCAGTGGCGTCTGGCCCTCGTCCTCATTGGGGTCTTCCCTGTG
GTCGTTGCAGCAACAGTTTTACAGAAAATGTTCATGAAGGGATTCTCAGGGGACTTGGAA
GCTGCTCATGCCAAGGCCACACAACTTGCTGGAGAAGCTGTAGCTAATGTAAGAACAGTT
GCTGCCTTTAATTCGGAGACGAAAATAGTTAATCTTTTCGACTCCAGCCTCCAAATTCCT
CTTAGGCGTTGCTTCTGGAAGGGACAGATTGCGGGAAGTGGTTATGGGATTGCTCAATTC
TTGCTTTATGCTTCCTATGCCCTTGGCCTTTGGTATGCCTCCTGGCTTGTCAAGCACGGG
ATCTCTGACTTCTCGAAGACGATCCGTGTTTTCATGGTGCTCATGGTTTCTGCTAATGGT
GCAGCCGAAACATTGACCTTAGCTCCTGACTTCATCAAGGGTGGCAGAGCAATGCGTTCT
GTTTTCGAACTCCTTGACCGTAAAACAGAAGTTGAGCCGGATGATCCAGATGCCACCGCT
GTCCCCGATCGTCTTCGTGGTGAAGTGGAATTTAAGCATGTAGACTTCTCATATCCCACT
AGACCCGACGTGTCAATTTTCCGTGATTTGAATCTTCGTGCTCGAGCTGGAAAGACTCTT
GCTCTTGTTGGACCAAGTGGATGTGGAAAGAGCTCAGTCATTTCACTTATAGAGCGGTTC
TACGAGCCATCATCTGGACGTGTCATCATCGATGGCAAGGATATTCGTAAGTACAACCTT
AAATCCTTGAGAAGACACATTGCTGTAGTGCCACAAGAACCTTGCCTCTTTGCTACCACC
ATCTATGAAAACATCGCGTATGGACATGAGTCAGCAACTGAAGCTGAGATAACCGAAGCA
GCAACCTTGGCAAACGCCCACAAGTTCATATCTGCATTGCCTGATGGATACAAAACATTT
GTCGGAGAAAGGGGAGTTCAATTGTCTGGTGGACAAAAGCAAAGAATCGCCATTGCTCGT
GCTTTCCTAAGGAAAGCCGAGCTAATGCTGCTAGATGAAGCAACAAGTGCACTTGATGCA
GAGTCTGAAAGATGTGTACAAGAAGCATTGGATCGCGCTTGTGCAGGTAAGACCACTATT
GTTGTTGCACATAGGCTATCCACAATCAGAAATGCACATGTGATCGCGGTCATAGACGAT
GGGAAAGTAGCAGAACAAGGTTCTCATTCTCATCTGTTGAAAAACTACTCAGATGGTATT
TATGCGCGTATGATACAACTACAACGATTTACACACGGAGAAGCTGTGAATATGGCAACA
GGATCAACGTCTTCCTCGCATCCTAAGGAAGATCAAGATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400006917
PEP Infomation

pacid=37457684 transcript=PGSC0003DMT400009924 locus=PGSC0003DMG400003889 ID=PGSC0003DMT400009924.v4.03 annot-version=v4.03
Sequence

MSQDSEEIKTIEHWKWSEMQGVELVVSEDKNSNTPTTTTTTTTNSHQFEETRMEVKKEEG
GDVEKPSSPPPAVGFGELFRFADGLDCVLMIIGSLGAFVHGCSLPLFLRFFADLVNSFGS
YANDVDKMTQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQTTKMRIKYLEAALNQD
IQYFDTEVRTSDVVSAINTDAVVVQEAISEKLGNFIHYMATFLSGFVVGFTAVWQLALVT
LAVVPLIAVIGAIYTVTSAKLSSQSQEALSKAGNIVEQTVVQIRTVLVFVGEAKALQAYT
AALRVSQKIGYKSGFSKGLGLGATYFTVFCCYALLLWYGGYLVRHHFTNGGLAIATMFAV
MIGGLALGQSAPSMTAFAKARVAAAKIFRIIDHKPSVDRNAKTGLELDTVSGQLELKNVE
FSYPSRPEIKILNNFNLVVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQLMLDGNDI
KTLKLKWLRQQIGLVSQEPALFATSIKENILLGRPDATQIEIEEAARVANAHSFVIKLPD
GFDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI
GRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGSHDELMSKGENGMYAKLIKMQEAAHETA
LSNARKSSARPSSARNSVSSPIITRNSSYGRSPYSRRLSDFSTSDFSLSLDAAYSNYRNE
KLAFKDQASSFGRLAKMNSPEWTYALIGSIGSVICGSLSAFFAYVLSAVLSVYYNPDHAY
MSKQIAKYCYLLIGVSSAALIFNTLQHYYWDVVGENLTKRVREKMLAAVLKMEMAWFDQE
ENDSSRIAARLSLDANNVRSAIGDRISVIMQNSALMLVACTAGFVLQWRLALVLIGVFPV
VVAATVLQKMFMKGFSGDLEAAHAKATQLAGEAVANVRTVAAFNSETKIVNLFDSSLQIP
LRRCFWKGQIAGSGYGIAQFLLYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANG
AAETLTLAPDFIKGGRAMRSVFELLDRKTEVEPDDPDATAVPDRLRGEVEFKHVDFSYPT
RPDVSIFRDLNLRARAGKTLALVGPSGCGKSSVISLIERFYEPSSGRVIIDGKDIRKYNL
KSLRRHIAVVPQEPCLFATTIYENIAYGHESATEAEITEAATLANAHKFISALPDGYKTF
VGERGVQLSGGQKQRIAIARAFLRKAELMLLDEATSALDAESERCVQEALDRACAGKTTI
VVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLLKNYSDGIYARMIQLQRFTHGEAVNMAT
GSTSSSHPKEDQD*

Transcript Sequence

Transcript ID

PGSC0003DMT400009924
Transcript Infomation

pacid=37457684 locus=PGSC0003DMG400003889 ID=PGSC0003DMT400009924.v4.03 annot-version=v4.03
Sequence

ATGTCACAAGATTCTGAGGAGATAAAAACCATTGAACATTGGAAATGGTCTGAAATGCAA
GGTGTTGAACTTGTTGTATCTGAAGACAAAAATTCAAACACCCCCACAACAACAACAACA
ACAACAACAAATAGTCATCAATTTGAAGAAACAAGAATGGAGGTTAAAAAAGAAGAAGGG
GGTGATGTGGAGAAGCCAAGTAGTCCACCACCAGCAGTTGGTTTTGGTGAACTTTTTAGA
TTTGCTGATGGTTTGGATTGTGTACTAATGATAATTGGTTCACTTGGTGCTTTTGTCCAT
GGATGTTCTTTGCCTTTGTTTCTTAGATTCTTTGCTGATCTTGTTAATTCTTTTGGCTCT
TATGCTAATGATGTTGATAAGATGACTCAAGAAGTTTTAAAGTATGCATTTTACTTTCTT
GTGGTGGGTGCTGCAATATGGGCATCTTCATGGGCAGAGATATCATGCTGGATGTGGACT
GGTGAGAGACAAACAACAAAGATGAGGATCAAATACTTAGAGGCTGCTTTGAACCAAGAT
ATTCAATATTTTGATACTGAAGTTAGAACTTCTGATGTTGTTTCTGCAATTAACACTGAT
GCTGTAGTGGTCCAAGAAGCCATTAGTGAGAAGTTGGGCAATTTCATTCATTATATGGCT
ACATTTTTGTCTGGATTTGTGGTGGGATTTACAGCAGTATGGCAATTAGCTCTAGTTACT
CTTGCTGTAGTTCCACTTATTGCTGTAATTGGTGCTATCTACACTGTGACATCAGCCAAA
TTGTCAAGTCAAAGTCAAGAAGCACTTTCAAAGGCAGGGAACATTGTTGAACAGACAGTA
GTTCAAATTCGGACGGTATTGGTGTTTGTTGGTGAGGCAAAAGCATTGCAAGCATACACA
GCAGCACTTAGAGTTTCTCAAAAGATTGGATATAAGAGTGGATTTTCAAAAGGATTAGGA
CTTGGAGCTACATATTTTACTGTTTTCTGTTGTTATGCTCTTCTTTTATGGTATGGGGGC
TATTTAGTTAGACATCATTTCACCAATGGAGGTCTTGCCATAGCAACAATGTTTGCAGTC
ATGATTGGTGGATTGGCATTGGGACAATCTGCCCCTAGCATGACTGCATTTGCAAAAGCT
AGAGTTGCAGCTGCCAAGATTTTCCGGATTATCGATCATAAGCCAAGCGTCGACAGAAAC
GCCAAGACGGGGTTGGAGTTAGACACTGTTAGTGGCCAGCTAGAGCTTAAGAATGTCGAG
TTCTCTTATCCTTCAAGGCCTGAAATCAAGATTCTCAACAATTTCAACCTCGTTGTTCCA
GCTGGAAAGACCATCGCTTTAGTCGGAAGCAGTGGTTCGGGGAAAAGCACTGTGGTATCC
CTTATCGAAAGATTTTATGATCCCACCTCAGGACAACTTATGCTTGATGGAAATGACATA
AAGACACTGAAATTGAAATGGCTAAGGCAGCAAATTGGCCTTGTAAGCCAAGAACCAGCA
CTTTTCGCAACAAGCATCAAAGAAAACATACTATTAGGAAGGCCAGATGCAACACAAATT
GAGATCGAAGAAGCTGCTAGAGTTGCCAATGCCCATTCTTTCGTAATCAAACTTCCTGAT
GGCTTTGATACTCAGGTAGGGGAGAGAGGATTACAATTATCGGGTGGACAGAAGCAGAGG
ATTGCTATAGCAAGGGCCATGCTTAAAAACCCGGCCATCCTTCTTTTAGATGAAGCAACT
AGTGCTTTAGATTCTGAATCGGAAAAACTAGTGCAGGAGGCTCTAGACAGGTTCATGATC
GGACGAACGACTCTTGTGATTGCTCATCGGCTGTCTACTATCCGGAAGGCTGACCTGGTG
GCTGTACTACAACAAGGCAGTGTCTCGGAGATTGGAAGCCACGATGAGCTTATGAGTAAA
GGAGAGAATGGTATGTATGCCAAGCTCATCAAAATGCAAGAAGCAGCTCATGAAACCGCT
CTTAGTAATGCCAGAAAGAGCAGTGCAAGGCCCTCGAGTGCAAGGAACTCCGTAAGCTCA
CCAATCATCACTAGAAACTCTTCCTATGGTCGATCACCATACTCCCGCCGGTTGTCTGAC
TTTTCTACCTCGGACTTCAGCCTCTCCCTTGATGCTGCATATTCTAATTACCGAAATGAA
AAGCTTGCATTCAAGGACCAAGCTAGTTCGTTTGGCCGGCTTGCAAAAATGAACTCTCCT
GAGTGGACTTATGCTTTAATTGGTTCTATAGGCTCTGTCATCTGTGGTTCACTTAGTGCT
TTCTTTGCATACGTCTTGAGTGCTGTTCTTAGCGTGTACTACAATCCGGATCATGCTTAC
ATGAGCAAACAAATTGCGAAATACTGTTATCTTTTGATTGGAGTTTCATCAGCTGCACTC
ATTTTTAACACTCTACAACATTACTACTGGGATGTAGTGGGGGAGAATTTGACAAAACGG
GTGAGAGAGAAAATGCTGGCAGCAGTGCTTAAAATGGAAATGGCGTGGTTCGATCAGGAA
GAGAACGATAGTTCAAGAATTGCAGCTAGGCTCTCTCTGGATGCCAACAATGTTAGGTCA
GCCATCGGGGATAGAATCTCCGTCATTATGCAGAACTCAGCTCTCATGCTAGTCGCATGC
ACTGCAGGATTCGTATTGCAGTGGCGTCTGGCCCTCGTCCTCATTGGGGTCTTCCCTGTG
GTCGTTGCAGCAACAGTTTTACAGAAAATGTTCATGAAGGGATTCTCAGGGGACTTGGAA
GCTGCTCATGCCAAGGCCACACAACTTGCTGGAGAAGCTGTAGCTAATGTAAGAACAGTT
GCTGCCTTTAATTCGGAGACGAAAATAGTTAATCTTTTCGACTCCAGCCTCCAAATTCCT
CTTAGGCGTTGCTTCTGGAAGGGACAGATTGCGGGAAGTGGTTATGGGATTGCTCAATTC
TTGCTTTATGCTTCCTATGCCCTTGGCCTTTGGTATGCCTCCTGGCTTGTCAAGCACGGG
ATCTCTGACTTCTCGAAGACGATCCGTGTTTTCATGGTGCTCATGGTTTCTGCTAATGGT
GCAGCCGAAACATTGACCTTAGCTCCTGACTTCATCAAGGGTGGCAGAGCAATGCGTTCT
GTTTTCGAACTCCTTGACCGTAAAACAGAAGTTGAGCCGGATGATCCAGATGCCACCGCT
GTCCCCGATCGTCTTCGTGGTGAAGTGGAATTTAAGCATGTAGACTTCTCATATCCCACT
AGACCCGACGTGTCAATTTTCCGTGATTTGAATCTTCGTGCTCGAGCTGGAAAGACTCTT
GCTCTTGTTGGACCAAGTGGATGTGGAAAGAGCTCAGTCATTTCACTTATAGAGCGGTTC
TACGAGCCATCATCTGGACGTGTCATCATCGATGGCAAGGATATTCGTAAGTACAACCTT
AAATCCTTGAGAAGACACATTGCTGTAGTGCCACAAGAACCTTGCCTCTTTGCTACCACC
ATCTATGAAAACATCGCGTATGGACATGAGTCAGCAACTGAAGCTGAGATAACCGAAGCA
GCAACCTTGGCAAACGCCCACAAGTTCATATCTGCATTGCCTGATGGATACAAAACATTT
GTCGGAGAAAGGGGAGTTCAATTGTCTGGTGGACAAAAGCAAAGAATCGCCATTGCTCGT
GCTTTCCTAAGGAAAGCCGAGCTAATGCTGCTAGATGAAGCAACAAGTGCACTTGATGCA
GAGTCTGAAAGATGTGTACAAGAAGCATTGGATCGCGCTTGTGCAGGTAAGACCACTATT
GTTGTTGCACATAGGCTATCCACAATCAGAAATGCACATGTGATCGCGGTCATAGACGAT
GGGAAAGTAGCAGAACAAGGTTCTCATTCTCATCTGTTGAAAAACTACTCAGATGGTATT
TATGCGCGTATGATACAACTACAACGATTTACACACGGAGAAGCTGTGAATATGGCAACA
GGATCAACGTCTTCCTCGCATCCTAAGGAAGATCAAGATTGA