Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009900
CDS Infomation

pacid=37457623 polypeptide=PGSC0003DMP400006896 locus=PGSC0003DMG400003880 ID=PGSC0003DMT400009900.v4.03 annot-version=v4.03
Sequence

ATGTCTCCAGCATTGGCAAAATCTAGTGAAAAATTGAAGAATGAAATTGAAGATAATTAT
CATAAAGGAGTAAAGTATTTGCATGAAAGTGGAATTCAAAAAGTTCCAAAGAAATACATT
TTTCCTATTTCAGAAAGACCAAATTCTTATACTATAAATGGAAATCCACAAGTTACTAGC
AAACACAATCTTAAGTTGCCTATCATAGATTTTGCTCAACTCTATGGTCCTAATAGAGCT
CAAGTTCTTGATTCACTATCCTATGCTTGTGAAAACTATGGATTTTTTCAGTTGATAAAC
CATGGAATTCCAGAAGAGGTAATAAAAAGTATGGTGGATGTTGGAGGAAGGTTTTTTGAT
CTTCCATTAGTAGAAAGGGAAAAGTACATGACAACAGACATGACAACACCTGTTCGATAT
GGGACAAGTTTTAATCAAACAAAAGATGGTGTCTTTTGTTGGAGGGACTTTCTCAAGTTG
GTTTGTGACCCTCTTCCTCAAGTCCTTCCTCATTGGCCTTCTTCTCCCTCTGATTTTAGG
GAAATGGCAGTCACATACTCAAAAGAGACCAAAATCTTATTTATAAAGTTAGTGGAAGCC
ATCCTAGAAAGCCTTGGAATTAATGTTGCAACAAAAAACAAGACACAACAAAATGATGAT
GATGATGATGATGAAATGTTAAAAGAATTTGAAGATGGAAGCCAGCTAATGGCTGTTAAT
TTTTATCCACCTTGTCCTAATCCTGATTTGACACTTGGAATGCCACCTCATTCTGATTAT
GGATTTCTAACTCTTCTACTACAAGATGAAGTTGAAGGTTTACAAGTGAAGTGCAATGAT
GATTGGGTCACTATTCAACCTATCCCTAATGCTTTTGTGGTCAATGTTGGTGACCACCTC
GAGATATTTAGCAATGGGAAGTACAAAAGTGTGTTACATAGAGTTCTTGTGAACTCTTTA
AAGTCAAGAATTTCAGTGGCTTCTTTGCATAGTCTTCCATTCAATAGCATAATAAAGCCA
TCACCTAAATTAATTAGTGAAGCAAATCCAAGTCTTTACAAAGACACAAATTTTGCTGCA
TTTCTTGAGTACTTAAAATCTTGTGATTCCACTAACAAAAGTTTCCTTGAGACAAGAAAG
TTAACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400006896
PEP Infomation

pacid=37457623 transcript=PGSC0003DMT400009900 locus=PGSC0003DMG400003880 ID=PGSC0003DMT400009900.v4.03 annot-version=v4.03
Sequence

MSPALAKSSEKLKNEIEDNYHKGVKYLHESGIQKVPKKYIFPISERPNSYTINGNPQVTS
KHNLKLPIIDFAQLYGPNRAQVLDSLSYACENYGFFQLINHGIPEEVIKSMVDVGGRFFD
LPLVEREKYMTTDMTTPVRYGTSFNQTKDGVFCWRDFLKLVCDPLPQVLPHWPSSPSDFR
EMAVTYSKETKILFIKLVEAILESLGINVATKNKTQQNDDDDDDEMLKEFEDGSQLMAVN
FYPPCPNPDLTLGMPPHSDYGFLTLLLQDEVEGLQVKCNDDWVTIQPIPNAFVVNVGDHL
EIFSNGKYKSVLHRVLVNSLKSRISVASLHSLPFNSIIKPSPKLISEANPSLYKDTNFAA
FLEYLKSCDSTNKSFLETRKLT*

Transcript Sequence

Transcript ID

PGSC0003DMT400009900
Transcript Infomation

pacid=37457623 locus=PGSC0003DMG400003880 ID=PGSC0003DMT400009900.v4.03 annot-version=v4.03
Sequence

ATGTCTCCAGCATTGGCAAAATCTAGTGAAAAATTGAAGAATGAAATTGAAGATAATTAT
CATAAAGGAGTAAAGTATTTGCATGAAAGTGGAATTCAAAAAGTTCCAAAGAAATACATT
TTTCCTATTTCAGAAAGACCAAATTCTTATACTATAAATGGAAATCCACAAGTTACTAGC
AAACACAATCTTAAGTTGCCTATCATAGATTTTGCTCAACTCTATGGTCCTAATAGAGCT
CAAGTTCTTGATTCACTATCCTATGCTTGTGAAAACTATGGATTTTTTCAGTTGATAAAC
CATGGAATTCCAGAAGAGGTAATAAAAAGTATGGTGGATGTTGGAGGAAGGTTTTTTGAT
CTTCCATTAGTAGAAAGGGAAAAGTACATGACAACAGACATGACAACACCTGTTCGATAT
GGGACAAGTTTTAATCAAACAAAAGATGGTGTCTTTTGTTGGAGGGACTTTCTCAAGTTG
GTTTGTGACCCTCTTCCTCAAGTCCTTCCTCATTGGCCTTCTTCTCCCTCTGATTTTAGG
GAAATGGCAGTCACATACTCAAAAGAGACCAAAATCTTATTTATAAAGTTAGTGGAAGCC
ATCCTAGAAAGCCTTGGAATTAATGTTGCAACAAAAAACAAGACACAACAAAATGATGAT
GATGATGATGATGAAATGTTAAAAGAATTTGAAGATGGAAGCCAGCTAATGGCTGTTAAT
TTTTATCCACCTTGTCCTAATCCTGATTTGACACTTGGAATGCCACCTCATTCTGATTAT
GGATTTCTAACTCTTCTACTACAAGATGAAGTTGAAGGTTTACAAGTGAAGTGCAATGAT
GATTGGGTCACTATTCAACCTATCCCTAATGCTTTTGTGGTCAATGTTGGTGACCACCTC
GAGATATTTAGCAATGGGAAGTACAAAAGTGTGTTACATAGAGTTCTTGTGAACTCTTTA
AAGTCAAGAATTTCAGTGGCTTCTTTGCATAGTCTTCCATTCAATAGCATAATAAAGCCA
TCACCTAAATTAATTAGTGAAGCAAATCCAAGTCTTTACAAAGACACAAATTTTGCTGCA
TTTCTTGAGTACTTAAAATCTTGTGATTCCACTAACAAAAGTTTCCTTGAGACAAGAAAG
TTAACATGA