Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009830
CDS Infomation

pacid=37458069 polypeptide=PGSC0003DMP400006842 locus=PGSC0003DMG400003848 ID=PGSC0003DMT400009830.v4.03 annot-version=v4.03
Sequence

ATGAAAGAAGATATAGAGCCAAGTGAGAATAGAGTAAATGAAGAAATAAGAACTCCTCTT
ATAATTCAAACAAATAAAAGTGAAAAGGTTGAAAATGGATGTTATGAGAAGAAACAAGAT
AGGTGCATGGTTTACCTTAGCACATTTGTGGCTGTTTGTGGTTCATATTCATTTGGATCT
TGTGCTGGATATTCATCACCAATACAATCCGCCATCAGAGAGGATCTTAACTTATCTATA
GCAGAGTTCTCACTCTTTGGTTCAATATTGACATTTGGTGCAATGATTGGAGCAATCACA
AGTGGTCCAATCGCTGATTATATTGGTCGTAAAGGGGCAATGAGAATGTCAAGTGGTTTC
TGTGTTGCTGGATGGTTAGCCATTTACTTCGCTCAGGGAGCACTTGCTCTGGACATTGGA
AGATTGGCAACAGGATATGGAATGGGAGTTTTCTCTTATGTGGTGCCAGTATTTATAGCT
GAAATTGCACCTAAAGATTTACGGGGAGCCTTGACAACCATAAACCAGCTGATGATATGT
TGTGGAGTCTCAGTTTCCTTCATTATAGGAACTATGATGACATGGAGAATGTTGGCATTA
ACAGGATTGATTCCATGTGCTATTCTCATTTTCGGTCTCTTTATCATTCCAGAGTCGCCT
AGGTGGTTGGCAAAAATAGGGAATCAAAAGGAGTTTGAACTTGCACTCCGTAAACTTCGA
GGCAAAGATGCTGATATATCTGAGGAGGCAGCTGAAATCAAGGATTATATAGAAACACTT
GAAAAGCTTCCGAAAGTCAACTTGTTTGATTTGTTTCAAAGAAGATACTCGAGCTCACTC
ATAGTGGGAGTTGGACTTATGGTGTTTCAACAGTTTGGTGGAATCAATGGAATCTGTTTC
TACACCGGTAGCATATTTGAGTCCTCAGGGTTCCCCTCTGACATCGGAACTATAATCTAT
GCAATTATTCAGGTTCCCATCACCGCGTTGGGTGCAGCCTTAATTGACAGAGCTGGACGA
AAACCTCTTTTATTGGTTTCAGGAACAGGACTTGTTATAGGCTGTGTACTAACAGGAGTC
TCATTCTATCTGAAGGGACATGAAATTGCAATAAAGGTAGCACCGATACTTGCTGTAACA
GGCATACTGGTCTATATCGGTTCCTTTTCAGTAGGAATGGGAGCAGTTCCATGGGTTGTG
ATGTCGGAGATATATCCTATAAATATTAAAGGTGCTGCTGGGAGCCTTGCAACATTAGTG
AATTGGTTCGGAGCATGGGCGTGCTCCTACACATTCAACTTCCTCATGACCTGGAATTCT
TTCGGTACTTTCATTCTGTATGCTGCAGTGAATGCACTTTCCATTTTATTTGTGATAAAG
ATAGTACCTGAAACCAAAGGAAGAACTTTGGAACAAATCCAGGCTGCTATTAATGCATCA
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400006842
PEP Infomation

pacid=37458069 transcript=PGSC0003DMT400009830 locus=PGSC0003DMG400003848 ID=PGSC0003DMT400009830.v4.03 annot-version=v4.03
Sequence

MKEDIEPSENRVNEEIRTPLIIQTNKSEKVENGCYEKKQDRCMVYLSTFVAVCGSYSFGS
CAGYSSPIQSAIREDLNLSIAEFSLFGSILTFGAMIGAITSGPIADYIGRKGAMRMSSGF
CVAGWLAIYFAQGALALDIGRLATGYGMGVFSYVVPVFIAEIAPKDLRGALTTINQLMIC
CGVSVSFIIGTMMTWRMLALTGLIPCAILIFGLFIIPESPRWLAKIGNQKEFELALRKLR
GKDADISEEAAEIKDYIETLEKLPKVNLFDLFQRRYSSSLIVGVGLMVFQQFGGINGICF
YTGSIFESSGFPSDIGTIIYAIIQVPITALGAALIDRAGRKPLLLVSGTGLVIGCVLTGV
SFYLKGHEIAIKVAPILAVTGILVYIGSFSVGMGAVPWVVMSEIYPINIKGAAGSLATLV
NWFGAWACSYTFNFLMTWNSFGTFILYAAVNALSILFVIKIVPETKGRTLEQIQAAINAS
*

Transcript Sequence

Transcript ID

PGSC0003DMT400009830
Transcript Infomation

pacid=37458069 locus=PGSC0003DMG400003848 ID=PGSC0003DMT400009830.v4.03 annot-version=v4.03
Sequence

ATGAAAGAAGATATAGAGCCAAGTGAGAATAGAGTAAATGAAGAAATAAGAACTCCTCTT
ATAATTCAAACAAATAAAAGTGAAAAGGTTGAAAATGGATGTTATGAGAAGAAACAAGAT
AGGTGCATGGTTTACCTTAGCACATTTGTGGCTGTTTGTGGTTCATATTCATTTGGATCT
TGTGCTGGATATTCATCACCAATACAATCCGCCATCAGAGAGGATCTTAACTTATCTATA
GCAGAGTTCTCACTCTTTGGTTCAATATTGACATTTGGTGCAATGATTGGAGCAATCACA
AGTGGTCCAATCGCTGATTATATTGGTCGTAAAGGGGCAATGAGAATGTCAAGTGGTTTC
TGTGTTGCTGGATGGTTAGCCATTTACTTCGCTCAGGGAGCACTTGCTCTGGACATTGGA
AGATTGGCAACAGGATATGGAATGGGAGTTTTCTCTTATGTGGTGCCAGTATTTATAGCT
GAAATTGCACCTAAAGATTTACGGGGAGCCTTGACAACCATAAACCAGCTGATGATATGT
TGTGGAGTCTCAGTTTCCTTCATTATAGGAACTATGATGACATGGAGAATGTTGGCATTA
ACAGGATTGATTCCATGTGCTATTCTCATTTTCGGTCTCTTTATCATTCCAGAGTCGCCT
AGGTGGTTGGCAAAAATAGGGAATCAAAAGGAGTTTGAACTTGCACTCCGTAAACTTCGA
GGCAAAGATGCTGATATATCTGAGGAGGCAGCTGAAATCAAGGATTATATAGAAACACTT
GAAAAGCTTCCGAAAGTCAACTTGTTTGATTTGTTTCAAAGAAGATACTCGAGCTCACTC
ATAGTGGGAGTTGGACTTATGGTGTTTCAACAGTTTGGTGGAATCAATGGAATCTGTTTC
TACACCGGTAGCATATTTGAGTCCTCAGGGTTCCCCTCTGACATCGGAACTATAATCTAT
GCAATTATTCAGGTTCCCATCACCGCGTTGGGTGCAGCCTTAATTGACAGAGCTGGACGA
AAACCTCTTTTATTGGTTTCAGGAACAGGACTTGTTATAGGCTGTGTACTAACAGGAGTC
TCATTCTATCTGAAGGGACATGAAATTGCAATAAAGGTAGCACCGATACTTGCTGTAACA
GGCATACTGGTCTATATCGGTTCCTTTTCAGTAGGAATGGGAGCAGTTCCATGGGTTGTG
ATGTCGGAGATATATCCTATAAATATTAAAGGTGCTGCTGGGAGCCTTGCAACATTAGTG
AATTGGTTCGGAGCATGGGCGTGCTCCTACACATTCAACTTCCTCATGACCTGGAATTCT
TTCGGTACTTTCATTCTGTATGCTGCAGTGAATGCACTTTCCATTTTATTTGTGATAAAG
ATAGTACCTGAAACCAAAGGAAGAACTTTGGAACAAATCCAGGCTGCTATTAATGCATCA
TAA