Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009821
CDS Infomation

pacid=37457257 polypeptide=PGSC0003DMP400006838 locus=PGSC0003DMG400003846 ID=PGSC0003DMT400009821.v4.03 annot-version=v4.03
Sequence

ATGATCCGATCAAGTGAAGCAGCTGCCATGAAGCGGAGAAGACTAAACGTGGATTCGCCT
ACTCAGGGACTTGTAGATGCTGACTATATAGTTCTCAATGTGGTGAAAAGTAAAAAGAAT
CAGGGTATCTTGAAGGCAGGGGTGAAAAAAGAGGCAAACATAGCACCAATTGTTGTGGAT
AAATCCTTGAAGTTACTGGTGAAAAAGAACTTGATAAAACAAGTCACAAATATCCAAAGT
AAGGGAAGGAATCCTTATTACATAGCTGTTGAGTTTGAACCTTCGGATGAACTGACTGGT
GGTGCGTGGTACTCGGAGGGAAATCTTGACAAGGAATTCATCACAGTTCTTAGAGACACT
TGCCTCAAGGTCATACAAATGCTGAAAGTTGCTACTGCAGAGGGAATCCACGATTTCTTG
AAGAAAAGGAAAGTTGTTGAGTGCACAAGTCAGCAAATCGCGGAAATATTGAAATCTATG
GTTCTGGACAATACTGTTATAGAGGTAAAGAGTATTGGATTGGGAGAATATCATTCTATT
CCTGTTGGATCAGTATGTTATCGAACTGCAAGCGGAGTTGCTCTAGAGGCTGATCCAAAA
ACAATCGCGCCAATGGCTTCAATTCCATGTGGTGCTTGCTCTAGGATTAATCAATGTACA
CCAAATGGAGTTATATCCCCACAAACCTGTGTCTACTACACTAAATGGTTAAACTTTGAA
TTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400006838
PEP Infomation

pacid=37457257 transcript=PGSC0003DMT400009821 locus=PGSC0003DMG400003846 ID=PGSC0003DMT400009821.v4.03 annot-version=v4.03
Sequence

MIRSSEAAAMKRRRLNVDSPTQGLVDADYIVLNVVKSKKNQGILKAGVKKEANIAPIVVD
KSLKLLVKKNLIKQVTNIQSKGRNPYYIAVEFEPSDELTGGAWYSEGNLDKEFITVLRDT
CLKVIQMLKVATAEGIHDFLKKRKVVECTSQQIAEILKSMVLDNTVIEVKSIGLGEYHSI
PVGSVCYRTASGVALEADPKTIAPMASIPCGACSRINQCTPNGVISPQTCVYYTKWLNFE
F*

Transcript Sequence

Transcript ID

PGSC0003DMT400009821
Transcript Infomation

pacid=37457257 locus=PGSC0003DMG400003846 ID=PGSC0003DMT400009821.v4.03 annot-version=v4.03
Sequence

ATGATCCGATCAAGTGAAGCAGCTGCCATGAAGCGGAGAAGACTAAACGTGGATTCGCCT
ACTCAGGGACTTGTAGATGCTGACTATATAGTTCTCAATGTGGTGAAAAGTAAAAAGAAT
CAGGGTATCTTGAAGGCAGGGGTGAAAAAAGAGGCAAACATAGCACCAATTGTTGTGGAT
AAATCCTTGAAGTTACTGGTGAAAAAGAACTTGATAAAACAAGTCACAAATATCCAAAGT
AAGGGAAGGAATCCTTATTACATAGCTGTTGAGTTTGAACCTTCGGATGAACTGACTGGT
GGTGCGTGGTACTCGGAGGGAAATCTTGACAAGGAATTCATCACAGTTCTTAGAGACACT
TGCCTCAAGGTCATACAAATGCTGAAAGTTGCTACTGCAGAGGGAATCCACGATTTCTTG
AAGAAAAGGAAAGTTGTTGAGTGCACAAGTCAGCAAATCGCGGAAATATTGAAATCTATG
GTTCTGGACAATACTGTTATAGAGGTAAAGAGTATTGGATTGGGAGAATATCATTCTATT
CCTGTTGGATCAGTATGTTATCGAACTGCAAGCGGAGTTGCTCTAGAGGCTGATCCAAAA
ACAATCGCGCCAATGGCTTCAATTCCATGTGGTGCTTGCTCTAGGATTAATCAATGTACA
CCAAATGGAGTTATATCCCCACAAACCTGTGTCTACTACACTAAATGGTTAAACTTTGAA
TTTTGA