Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009743
CDS Infomation

pacid=37455672 polypeptide=PGSC0003DMP400006787 locus=PGSC0003DMG400003812 ID=PGSC0003DMT400009743.v4.03 annot-version=v4.03
Sequence

ATGCTAAGAGTCCTCAACGAAAAGCTGAAGCGCCTCTGTTTTAGTCTCCGGTGGCCAATA
CGCTGCCGTTCAAAGAGCAAAATCAAAATTACTGTGCAAAAACTGGGAAAATCCAATTCA
AGTTCTCATTCTCAAATTGATCCATCAAATTCAAATGGGTCTGCAGCAATTCATCCCAGT
AATGGCGAATTGAATCGTTCTAAAACTGGACGAACAATACGCGTAGCTACATTTAATGCT
GCCCTTTTCTCCATGGCACCGGCACTCCCAAAGAGTAGTACTGATAGATCAGCTAGTTTT
GATTTTGAAAATGACGAATTTTCAAATTCAAAAGCTGGTAAAATGAGTGATTACTATAAT
TTAAGAGTGAAATCAGCGAATGATCGGCCTAAGAGTATACTCAAACAATCTCCTCTTCAT
CCCACGAATGAAACGGATACAATATTGTTGAAAAGACAAAGTTTCTCGAAATCGAAGTTA
AGGGTTTCGATTAATTTACCAGATAACGAAATATCTCTGAAGAAAAGTGGGCAATTGAGG
ATTTTGGGATGTGATAGTGAGAGGTATTCGGGGAGTGGGATATGTAGAGGAAAAGCTCCG
TTAAGGTCTACTGTGAGTATGCCTCGGATTGATTGTCAGAGTTATAGAATTACGAGAAGT
GTTCTTGAAGTTTTGAGAGAATTGAATGCAGATATTTTGGCTTTGCAAGATGTTAAAGCA
GAGGAGGAGAAAGGTATGAAGCCGTTATCGGATTTGGCTGATGCTTTAGGGATGAATTAT
GTTTTTGCAGAAAGTTGGGCACCTGAGTATGGTAATGCTATTATGTCAAAATGGCCAATC
AAGTCCTGGAATATTCAAAAAATCTTTGATGACTCCGACTTCAGAAATGTTCTGAAGGCA
ACAATTGACGTTCCTCGAGTTGGAGAACTAAATTTCTTCTGTACACACCTTGATCACTTG
GATGAGAATTGGCGAATGAAGCAGATAAATGCAATAATCCAATCATCTGATAAACCACAC
ATTTTAGCCGGGGGTCTAAATTCTCTTGACGAAACAGATTACTCTACAGAAAGATGGACA
GAAATTGTAAAGTATTATGAAGAGATGGGAAAGCCAATACCAAAATTCGAAGTAATGAAG
TATTTGAAGAGTAAAGAATATACAGATGCTAAGGATTTCGCTGGGGAATGCGAGTCTGTT
GTCATGATTGCCAAAGGACAGAGCGTGCAAGGAACGTGCAAGTATGGAACACGAGTGGAT
TACGTACTTTCATCATCCGATTCACCATACAAGTTTGTTCCAGGATCATACTCGGTTTTC
TCCTCGAAAGGAACATCTGATCACCACATAGTGAAAGTTGATTTGGTAAAAGTAGATACT
GTTCCTCGCGAATACGTCAACAAGAAAAGGTGGGATTCAAAACATAAAGTAGTGAGGATT
ACTCATTCAAATCCAAACAAGGGTGTATGGAAAATAGACGCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400006787
PEP Infomation

pacid=37455672 transcript=PGSC0003DMT400009743 locus=PGSC0003DMG400003812 ID=PGSC0003DMT400009743.v4.03 annot-version=v4.03
Sequence

MLRVLNEKLKRLCFSLRWPIRCRSKSKIKITVQKLGKSNSSSHSQIDPSNSNGSAAIHPS
NGELNRSKTGRTIRVATFNAALFSMAPALPKSSTDRSASFDFENDEFSNSKAGKMSDYYN
LRVKSANDRPKSILKQSPLHPTNETDTILLKRQSFSKSKLRVSINLPDNEISLKKSGQLR
ILGCDSERYSGSGICRGKAPLRSTVSMPRIDCQSYRITRSVLEVLRELNADILALQDVKA
EEEKGMKPLSDLADALGMNYVFAESWAPEYGNAIMSKWPIKSWNIQKIFDDSDFRNVLKA
TIDVPRVGELNFFCTHLDHLDENWRMKQINAIIQSSDKPHILAGGLNSLDETDYSTERWT
EIVKYYEEMGKPIPKFEVMKYLKSKEYTDAKDFAGECESVVMIAKGQSVQGTCKYGTRVD
YVLSSSDSPYKFVPGSYSVFSSKGTSDHHIVKVDLVKVDTVPREYVNKKRWDSKHKVVRI
THSNPNKGVWKIDA*

Transcript Sequence

Transcript ID

PGSC0003DMT400009743
Transcript Infomation

pacid=37455672 locus=PGSC0003DMG400003812 ID=PGSC0003DMT400009743.v4.03 annot-version=v4.03
Sequence

ATGCTAAGAGTCCTCAACGAAAAGCTGAAGCGCCTCTGTTTTAGTCTCCGGTGGCCAATA
CGCTGCCGTTCAAAGAGCAAAATCAAAATTACTGTGCAAAAACTGGGAAAATCCAATTCA
AGTTCTCATTCTCAAATTGATCCATCAAATTCAAATGGGTCTGCAGCAATTCATCCCAGT
AATGGCGAATTGAATCGTTCTAAAACTGGACGAACAATACGCGTAGCTACATTTAATGCT
GCCCTTTTCTCCATGGCACCGGCACTCCCAAAGAGTAGTACTGATAGATCAGCTAGTTTT
GATTTTGAAAATGACGAATTTTCAAATTCAAAAGCTGGTAAAATGAGTGATTACTATAAT
TTAAGAGTGAAATCAGCGAATGATCGGCCTAAGAGTATACTCAAACAATCTCCTCTTCAT
CCCACGAATGAAACGGATACAATATTGTTGAAAAGACAAAGTTTCTCGAAATCGAAGTTA
AGGGTTTCGATTAATTTACCAGATAACGAAATATCTCTGAAGAAAAGTGGGCAATTGAGG
ATTTTGGGATGTGATAGTGAGAGGTATTCGGGGAGTGGGATATGTAGAGGAAAAGCTCCG
TTAAGGTCTACTGTGAGTATGCCTCGGATTGATTGTCAGAGTTATAGAATTACGAGAAGT
GTTCTTGAAGTTTTGAGAGAATTGAATGCAGATATTTTGGCTTTGCAAGATGTTAAAGCA
GAGGAGGAGAAAGGTATGAAGCCGTTATCGGATTTGGCTGATGCTTTAGGGATGAATTAT
GTTTTTGCAGAAAGTTGGGCACCTGAGTATGGTAATGCTATTATGTCAAAATGGCCAATC
AAGTCCTGGAATATTCAAAAAATCTTTGATGACTCCGACTTCAGAAATGTTCTGAAGGCA
ACAATTGACGTTCCTCGAGTTGGAGAACTAAATTTCTTCTGTACACACCTTGATCACTTG
GATGAGAATTGGCGAATGAAGCAGATAAATGCAATAATCCAATCATCTGATAAACCACAC
ATTTTAGCCGGGGGTCTAAATTCTCTTGACGAAACAGATTACTCTACAGAAAGATGGACA
GAAATTGTAAAGTATTATGAAGAGATGGGAAAGCCAATACCAAAATTCGAAGTAATGAAG
TATTTGAAGAGTAAAGAATATACAGATGCTAAGGATTTCGCTGGGGAATGCGAGTCTGTT
GTCATGATTGCCAAAGGACAGAGCGTGCAAGGAACGTGCAAGTATGGAACACGAGTGGAT
TACGTACTTTCATCATCCGATTCACCATACAAGTTTGTTCCAGGATCATACTCGGTTTTC
TCCTCGAAAGGAACATCTGATCACCACATAGTGAAAGTTGATTTGGTAAAAGTAGATACT
GTTCCTCGCGAATACGTCAACAAGAAAAGGTGGGATTCAAAACATAAAGTAGTGAGGATT
ACTCATTCAAATCCAAACAAGGGTGTATGGAAAATAGACGCATGA