Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009731
CDS Infomation

pacid=37456929 polypeptide=PGSC0003DMP400006781 locus=PGSC0003DMG400003807 ID=PGSC0003DMT400009731.v4.03 annot-version=v4.03
Sequence

ATGAGAGGCATACAGTTATCTTTCAGCAACACCCAAAAGCTAAGATTAGAAAAAGCATTA
GCGCAATTGGAATCCCTTTCTTCAAAGCTTAATTCCAATGCCACTGTCATTGTTGCAGAC
AAAATTCCAGTCGACGAAGATGCTGCCCTCAAAGGACATGGGACGTTGGAGATGGGCAAT
GATGTTGTTGCAAGTGTATGTGGAGTGGTTGAGCGAGTGAATAAGCTTGTTTATGTTAGA
CCTTTAAGGGCCAGGTATAAGCCGGAGATTGGTGATATTATAGTCGGCCGTGTTATTGAG
GTTGCTCCAAAGAGATGGAGGTTGGAAATTAATTTCAGCCAAGACGCTGTACTAATGCTC
TCCTCAATGAATCTTCCAGATGGCATTCAGAGGCGGCGAACAGCAGTTGATGAACTCAAT
ATGCGAAGCATATTTGTGGAGAATGATGTCATCTGTGCTGAAGTCCGTGGTTTCCAGCAT
GATGGGAGTCTACACCTCCAAGCTAGAAGCCAAAAGTATGGAAAGCTTGAAAGAGGGAAA
CTACTCAAAATCCCTCCATATCTAGTGAAAAGGCGTAAACAGCATTTCCACCATCTAGAT
CAGTATGGAGTTGACTTGATTTTTGGCTGCAATGGATTAATTTGGGTTGGGGAACACGTT
GATGTAAAAGATGCCATGGTGGAGGATCAAGTAAATAAGTCTGATCCACAGAACACCCAT
TCATCAAGCTTACCAGGTTCTAGTGAAGAACCAACTGATACACCACTGGAAAGAAGACAA
TACATATGCAGGATAGCAAATGCCATCACGGTATTCTCAGCTTTAGGCTTCATGGTTAAT
TTGGACTCCGTAATGGAGACAGTTACCCTGAGCTTATCTTTGAACCTTGGTGTACATGAG
ATGCTTGAAGCAGAATTCCATGTTCGAGTTGCTGAGCAAGAAGCTGAACAACGGAGCACA
TCAAAAAGAAGGAAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400006781
PEP Infomation

pacid=37456929 transcript=PGSC0003DMT400009731 locus=PGSC0003DMG400003807 ID=PGSC0003DMT400009731.v4.03 annot-version=v4.03
Sequence

MRGIQLSFSNTQKLRLEKALAQLESLSSKLNSNATVIVADKIPVDEDAALKGHGTLEMGN
DVVASVCGVVERVNKLVYVRPLRARYKPEIGDIIVGRVIEVAPKRWRLEINFSQDAVLML
SSMNLPDGIQRRRTAVDELNMRSIFVENDVICAEVRGFQHDGSLHLQARSQKYGKLERGK
LLKIPPYLVKRRKQHFHHLDQYGVDLIFGCNGLIWVGEHVDVKDAMVEDQVNKSDPQNTH
SSSLPGSSEEPTDTPLERRQYICRIANAITVFSALGFMVNLDSVMETVTLSLSLNLGVHE
MLEAEFHVRVAEQEAEQRSTSKRRK*

Transcript Sequence

Transcript ID

PGSC0003DMT400009731
Transcript Infomation

pacid=37456929 locus=PGSC0003DMG400003807 ID=PGSC0003DMT400009731.v4.03 annot-version=v4.03
Sequence

ATGAGAGGCATACAGTTATCTTTCAGCAACACCCAAAAGCTAAGATTAGAAAAAGCATTA
GCGCAATTGGAATCCCTTTCTTCAAAGCTTAATTCCAATGCCACTGTCATTGTTGCAGAC
AAAATTCCAGTCGACGAAGATGCTGCCCTCAAAGGACATGGGACGTTGGAGATGGGCAAT
GATGTTGTTGCAAGTGTATGTGGAGTGGTTGAGCGAGTGAATAAGCTTGTTTATGTTAGA
CCTTTAAGGGCCAGGTATAAGCCGGAGATTGGTGATATTATAGTCGGCCGTGTTATTGAG
GTTGCTCCAAAGAGATGGAGGTTGGAAATTAATTTCAGCCAAGACGCTGTACTAATGCTC
TCCTCAATGAATCTTCCAGATGGCATTCAGAGGCGGCGAACAGCAGTTGATGAACTCAAT
ATGCGAAGCATATTTGTGGAGAATGATGTCATCTGTGCTGAAGTCCGTGGTTTCCAGCAT
GATGGGAGTCTACACCTCCAAGCTAGAAGCCAAAAGTATGGAAAGCTTGAAAGAGGGAAA
CTACTCAAAATCCCTCCATATCTAGTGAAAAGGCGTAAACAGCATTTCCACCATCTAGAT
CAGTATGGAGTTGACTTGATTTTTGGCTGCAATGGATTAATTTGGGTTGGGGAACACGTT
GATGTAAAAGATGCCATGGTGGAGGATCAAGTAAATAAGTCTGATCCACAGAACACCCAT
TCATCAAGCTTACCAGGTTCTAGTGAAGAACCAACTGATACACCACTGGAAAGAAGACAA
TACATATGCAGGATAGCAAATGCCATCACGGTATTCTCAGCTTTAGGCTTCATGGTTAAT
TTGGACTCCGTAATGGAGACAGTTACCCTGAGCTTATCTTTGAACCTTGGTGTACATGAG
ATGCTTGAAGCAGAATTCCATGTTCGAGTTGCTGAGCAAGAAGCTGAACAACGGAGCACA
TCAAAAAGAAGGAAATAG