Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009727
CDS Infomation

pacid=37458251 polypeptide=PGSC0003DMP400006777 locus=PGSC0003DMG400003805 ID=PGSC0003DMT400009727.v4.03 annot-version=v4.03
Sequence

ATGCCGCCGGCAGCCGGCGTTGTTGCGAATTCCGATCGAGTTTCATTTGGTAATTCTATG
GTTATCCCTACTGCCGGTGCTCCGGTAATCCAACAACCTCCAATGACGTCGGAAACATTC
GCTAAGGATGCAATTATAGCGTGGTTCAGAGGTGAATTCGCCGCTGCAAATGCGATTATT
GATGCGCTTTGTAATCATATCACTCAGCTGGAAGGCGACCGATCGGAGTATGAACCGGTT
TTCTCCGCTATACATCGACGGAGACTGAATTGGATCCCGATTCTTCAGATGCAAAAGTAT
TATTCGATTGCTGATGTAACGCTTGAACTCCGTAAACTCGCTGCTAGAAAAGTGAGTGAT
AGAGTCGAGGTCGCCGACGTGAAACAGAGCGAAGTAGTGAAGGAATCGTTTAATGAGAAG
ATCAATTGTCACGATGAGTCGGAAAATGCAGGCAGTGAGGTGGTGGATGTAGATTCAGTT
AGAGATGATTCAAATGGATCGCCGGAAAGTGAGATCACGGATACAGGATCTCAAGAAGTA
CAGCATTTCCTGGATTCTGATGAATTTTGCACAAACCATGAAAACTGCGAGGCGAGGCAT
GACCAGATGAAGATGACAAAGGGTTTTGTATCAAAGGAACCAGTCAAAGGACATATGGTG
AATGTTGTGAGAGGTCTCAAGTTATTCGAAGACGTTTTTACTACGAATGAAATCTCTAAA
TTAGATGACCTTGTGAATGAACTTCGAGTTGCTGGTCAAAATGGTGAACTCTCAGGTGAA
ACTTTTATTCTGTACAACCAGCAGGTGAAGGGCAGCAAAAGAGAGCTAATTCAGCTTGGT
GCACCAATTTTTGAGCATGTAAAAGAGGACGCCGCATGTCAGAAGAGTCACAATGAGCCC
ATTCCAGCCCTTCTGCAAGGTGTCATAAACCACCTGATTCAGTGGCATCTAATATCAGAG
AATAGAAGACCTAATAGCTGCATCATCAACTTTTTTGATGAGGGGGAGTATTCACAGCCT
TTCCTGAAACCACCTCACTTGGAACAGCCAGTGTCCACCCTTGTCCTAGCTGACTCAATG
ATGGCATTTGGGCGAACACTTGTATGCGACAGTGAAGGGAACTACAAAGGCTCGCTTATG
CTTTCTCTAAAAGAGGGGTCTCTTTTGGTCATGAGGGGAAACAGTGCTGATATGGCCAGA
CATGCTATGTGCTCGTCTCCTAACAAAAGAGTTACGATCACGTTCTTCAAAGTCAGAACA
GAGATGGGAAACAACTTTTCAGAAGCTGCTCCTCTGACTAGAGCCATGACCATATGGCAA
CCTGGTGTTCCAACACAATATGCAACTGCAAATAGAGCACACAATGGTTATGAGCCAATG
GATATGATCCCCAAATGGGGGGGTGTTGTTCGATCTCCGGTGGTTATGCTGGCACCACTG
CGTCCAGTAGTTATGAATCCCCGGAGGGCTCCTCGTGGTGGTACTGGTGTATTTCTGCCA
TGGAATGGTGGATCCAGAAAACCTGCAAAGCATCTTCCACCGCGTGCTCAAAGAGGACGG
TTCCTTGCACTACCTCCCCCTGGTGACTCGCCTAAATCAGAGACCGCTTCAGAACCAAGT
TTGGATCTTGATGGCAAATCCCCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400006777
PEP Infomation

pacid=37458251 transcript=PGSC0003DMT400009727 locus=PGSC0003DMG400003805 ID=PGSC0003DMT400009727.v4.03 annot-version=v4.03
Sequence

MPPAAGVVANSDRVSFGNSMVIPTAGAPVIQQPPMTSETFAKDAIIAWFRGEFAAANAII
DALCNHITQLEGDRSEYEPVFSAIHRRRLNWIPILQMQKYYSIADVTLELRKLAARKVSD
RVEVADVKQSEVVKESFNEKINCHDESENAGSEVVDVDSVRDDSNGSPESEITDTGSQEV
QHFLDSDEFCTNHENCEARHDQMKMTKGFVSKEPVKGHMVNVVRGLKLFEDVFTTNEISK
LDDLVNELRVAGQNGELSGETFILYNQQVKGSKRELIQLGAPIFEHVKEDAACQKSHNEP
IPALLQGVINHLIQWHLISENRRPNSCIINFFDEGEYSQPFLKPPHLEQPVSTLVLADSM
MAFGRTLVCDSEGNYKGSLMLSLKEGSLLVMRGNSADMARHAMCSSPNKRVTITFFKVRT
EMGNNFSEAAPLTRAMTIWQPGVPTQYATANRAHNGYEPMDMIPKWGGVVRSPVVMLAPL
RPVVMNPRRAPRGGTGVFLPWNGGSRKPAKHLPPRAQRGRFLALPPPGDSPKSETASEPS
LDLDGKSP*

Transcript Sequence

Transcript ID

PGSC0003DMT400009727
Transcript Infomation

pacid=37458251 locus=PGSC0003DMG400003805 ID=PGSC0003DMT400009727.v4.03 annot-version=v4.03
Sequence

ATGCCGCCGGCAGCCGGCGTTGTTGCGAATTCCGATCGAGTTTCATTTGGTAATTCTATG
GTTATCCCTACTGCCGGTGCTCCGGTAATCCAACAACCTCCAATGACGTCGGAAACATTC
GCTAAGGATGCAATTATAGCGTGGTTCAGAGGTGAATTCGCCGCTGCAAATGCGATTATT
GATGCGCTTTGTAATCATATCACTCAGCTGGAAGGCGACCGATCGGAGTATGAACCGGTT
TTCTCCGCTATACATCGACGGAGACTGAATTGGATCCCGATTCTTCAGATGCAAAAGTAT
TATTCGATTGCTGATGTAACGCTTGAACTCCGTAAACTCGCTGCTAGAAAAGTGAGTGAT
AGAGTCGAGGTCGCCGACGTGAAACAGAGCGAAGTAGTGAAGGAATCGTTTAATGAGAAG
ATCAATTGTCACGATGAGTCGGAAAATGCAGGCAGTGAGGTGGTGGATGTAGATTCAGTT
AGAGATGATTCAAATGGATCGCCGGAAAGTGAGATCACGGATACAGGATCTCAAGAAGTA
CAGCATTTCCTGGATTCTGATGAATTTTGCACAAACCATGAAAACTGCGAGGCGAGGCAT
GACCAGATGAAGATGACAAAGGGTTTTGTATCAAAGGAACCAGTCAAAGGACATATGGTG
AATGTTGTGAGAGGTCTCAAGTTATTCGAAGACGTTTTTACTACGAATGAAATCTCTAAA
TTAGATGACCTTGTGAATGAACTTCGAGTTGCTGGTCAAAATGGTGAACTCTCAGGTGAA
ACTTTTATTCTGTACAACCAGCAGGTGAAGGGCAGCAAAAGAGAGCTAATTCAGCTTGGT
GCACCAATTTTTGAGCATGTAAAAGAGGACGCCGCATGTCAGAAGAGTCACAATGAGCCC
ATTCCAGCCCTTCTGCAAGGTGTCATAAACCACCTGATTCAGTGGCATCTAATATCAGAG
AATAGAAGACCTAATAGCTGCATCATCAACTTTTTTGATGAGGGGGAGTATTCACAGCCT
TTCCTGAAACCACCTCACTTGGAACAGCCAGTGTCCACCCTTGTCCTAGCTGACTCAATG
ATGGCATTTGGGCGAACACTTGTATGCGACAGTGAAGGGAACTACAAAGGCTCGCTTATG
CTTTCTCTAAAAGAGGGGTCTCTTTTGGTCATGAGGGGAAACAGTGCTGATATGGCCAGA
CATGCTATGTGCTCGTCTCCTAACAAAAGAGTTACGATCACGTTCTTCAAAGTCAGAACA
GAGATGGGAAACAACTTTTCAGAAGCTGCTCCTCTGACTAGAGCCATGACCATATGGCAA
CCTGGTGTTCCAACACAATATGCAACTGCAAATAGAGCACACAATGGTTATGAGCCAATG
GATATGATCCCCAAATGGGGGGGTGTTGTTCGATCTCCGGTGGTTATGCTGGCACCACTG
CGTCCAGTAGTTATGAATCCCCGGAGGGCTCCTCGTGGTGGTACTGGTGTATTTCTGCCA
TGGAATGGTGGATCCAGAAAACCTGCAAAGCATCTTCCACCGCGTGCTCAAAGAGGACGG
TTCCTTGCACTACCTCCCCCTGGTGACTCGCCTAAATCAGAGACCGCTTCAGAACCAAGT
TTGGATCTTGATGGCAAATCCCCATAG