Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009709
CDS Infomation

pacid=37455620 polypeptide=PGSC0003DMP400006767 locus=PGSC0003DMG400003797 ID=PGSC0003DMT400009709.v4.03 annot-version=v4.03
Sequence

ATGGAAAATTCAATTCCTGTTCTGCCAGAAGAGCTTGTTACTGAAATCCTTTCGAGGCTT
CCGGTAAAATCCCTCTTGAAATTCATGTGCGTTTCAAAATCTTGGCTTGCTTTGATTTCT
AGCCCTGAATTTGTGAAAACTCATCTCAGCTTAAATGCTAATAACAACGAATACACCCGC
CATAAGGTTATGATGTTTGAACGTACTGCCTACACTTTTCGAGATTGTAGTGTTAGCTGT
TTATTTAATAACTCATCGATCAGGGCAAACAACTTGGATTATCCCAGGCAAGTTCCATGT
TGTTTTTATATGGTAGGTTCTGTGAATGGATTGATTTGTCTTGTTAGTCAGCTGAAGGAA
TTCTTTCTATGGAATCCATCAATTAGAAAGTACAAAAAGTTGTCTAATAGTAAAACTAAA
ACTAATTTGGTGTATTCCGTATATGGTTTTGGGTATGATGAGTTCCATGATGATTATAAG
GTAGTCGTTATTTTTATCATTCGCAGAGATGACTTTTCACTTCAAATTGAGGTAAAAGAA
TATAGTCTAAAAAGCGATTCTTGGAGAACTGTTGATAATTGTCCAAGTATCACACCGCTA
CAGCAGTCAGGTATGTTTGTAAATGGGAAACTTCATTGGGTTAGTATTATTGATCTTAAA
CGAAACATCATTTCTTTCGATTTGGCTTACGGGAAATGGGGAGAGATGGAACTACCCTGT
TATTGGAATGGAGGAAGAGGTGAGGTTTTGAGCTTGGGAAGTGATCGTTTGGTCTTTTGT
GATTGTGACGAAATATATATGTTAGATGTTTGGCTTATGAAGGAGTATGGGGTTAAAGAA
TCTTGGATGAAGATGTTTACTATCAAGATTCCACAGGATCAATTGGTGTATAGAAACCTT
GGGCAAATATGTTTACACATGGCAAGTGGAAGTGAAATTTTGGTTGTATTTGGATCAAGT
TTCATGATATACAATACAAAGGGTGACCCGCTCAGATCTTCAAAGATTATTAACTCTAAT
AATTGGGACGAGGCGAGAATCTACATTGAAAGCCTAGTTTGGCCTTTCTCTACAGTAGGG
ACTGAGGATGCAACAAAAAGGGGACTGAAAAGCTCTGGTTGTGAAACAACGAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400006767
PEP Infomation

pacid=37455620 transcript=PGSC0003DMT400009709 locus=PGSC0003DMG400003797 ID=PGSC0003DMT400009709.v4.03 annot-version=v4.03
Sequence

MENSIPVLPEELVTEILSRLPVKSLLKFMCVSKSWLALISSPEFVKTHLSLNANNNEYTR
HKVMMFERTAYTFRDCSVSCLFNNSSIRANNLDYPRQVPCCFYMVGSVNGLICLVSQLKE
FFLWNPSIRKYKKLSNSKTKTNLVYSVYGFGYDEFHDDYKVVVIFIIRRDDFSLQIEVKE
YSLKSDSWRTVDNCPSITPLQQSGMFVNGKLHWVSIIDLKRNIISFDLAYGKWGEMELPC
YWNGGRGEVLSLGSDRLVFCDCDEIYMLDVWLMKEYGVKESWMKMFTIKIPQDQLVYRNL
GQICLHMASGSEILVVFGSSFMIYNTKGDPLRSSKIINSNNWDEARIYIESLVWPFSTVG
TEDATKRGLKSSGCETTK*

Transcript Sequence

Transcript ID

PGSC0003DMT400009709
Transcript Infomation

pacid=37455620 locus=PGSC0003DMG400003797 ID=PGSC0003DMT400009709.v4.03 annot-version=v4.03
Sequence

ATGGAAAATTCAATTCCTGTTCTGCCAGAAGAGCTTGTTACTGAAATCCTTTCGAGGCTT
CCGGTAAAATCCCTCTTGAAATTCATGTGCGTTTCAAAATCTTGGCTTGCTTTGATTTCT
AGCCCTGAATTTGTGAAAACTCATCTCAGCTTAAATGCTAATAACAACGAATACACCCGC
CATAAGGTTATGATGTTTGAACGTACTGCCTACACTTTTCGAGATTGTAGTGTTAGCTGT
TTATTTAATAACTCATCGATCAGGGCAAACAACTTGGATTATCCCAGGCAAGTTCCATGT
TGTTTTTATATGGTAGGTTCTGTGAATGGATTGATTTGTCTTGTTAGTCAGCTGAAGGAA
TTCTTTCTATGGAATCCATCAATTAGAAAGTACAAAAAGTTGTCTAATAGTAAAACTAAA
ACTAATTTGGTGTATTCCGTATATGGTTTTGGGTATGATGAGTTCCATGATGATTATAAG
GTAGTCGTTATTTTTATCATTCGCAGAGATGACTTTTCACTTCAAATTGAGGTAAAAGAA
TATAGTCTAAAAAGCGATTCTTGGAGAACTGTTGATAATTGTCCAAGTATCACACCGCTA
CAGCAGTCAGGTATGTTTGTAAATGGGAAACTTCATTGGGTTAGTATTATTGATCTTAAA
CGAAACATCATTTCTTTCGATTTGGCTTACGGGAAATGGGGAGAGATGGAACTACCCTGT
TATTGGAATGGAGGAAGAGGTGAGGTTTTGAGCTTGGGAAGTGATCGTTTGGTCTTTTGT
GATTGTGACGAAATATATATGTTAGATGTTTGGCTTATGAAGGAGTATGGGGTTAAAGAA
TCTTGGATGAAGATGTTTACTATCAAGATTCCACAGGATCAATTGGTGTATAGAAACCTT
GGGCAAATATGTTTACACATGGCAAGTGGAAGTGAAATTTTGGTTGTATTTGGATCAAGT
TTCATGATATACAATACAAAGGGTGACCCGCTCAGATCTTCAAAGATTATTAACTCTAAT
AATTGGGACGAGGCGAGAATCTACATTGAAAGCCTAGTTTGGCCTTTCTCTACAGTAGGG
ACTGAGGATGCAACAAAAAGGGGACTGAAAAGCTCTGGTTGTGAAACAACGAAATAA