Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009696
CDS Infomation

pacid=37455626 polypeptide=PGSC0003DMP400006759 locus=PGSC0003DMG400003790 ID=PGSC0003DMT400009696.v4.03 annot-version=v4.03
Sequence

ATGACAACATTTCATACTACCTTAGTTTACATCTTGTATGTGCTACTTCTTTTTTCACTT
CCATTAAGTATCACATCTTCAGCAAGAACAGAAGCTGAATCTCTTGTCAAATGGAAGAGA
AATTTACCTTCTACTTCTTTCTTGGACACATGGTCCATTTCGAATCTCGAAAACTTGTGC
AATTGGACATATATTGTGTGTAATGATGGTGGAACAATTTCTGAGATCAATCTTTCTGAT
GCAGCCCTCTCAGGCACACTTGATCACCTTGATTTCACTTCATTTCCGAGTCTCGTGAAT
TTCAATCTTAATGGAAATAACTTCAGTGGATCGATACCTTCGAGTATTGGCAATGCCTCA
TTGCTCACATTCTTGGACCTGAGTAACAATATCTTATCAGGTGTCATACCTGAAGAGATT
GGAAAATTGAATCAACTTGAGTATCTGAGTTTTTATAACAACAATATCGAAGGTGTGATG
CCGTATCAGATTAGCAATCTGCAGAAGGTAATGCACTTGGATCTTGGATCAAATTTCTTA
GAAACTCCTGATTGGTTGAAGATGAGAAATATGCCTGTGTTGACGTATCTAAGCTTTGGT
TATAATGAACTGAGGTTAGAATTCCCTGAATTCGTACTTCGTTGTCATAATCTAACATAT
CTTGATTTATCGATAAATCATTTCAATGGTTCGATTCCTGAAACAGTATTTACCAACTTG
ATCAACCTTGAAAGACTTAATCTTTCATCTAATTCATTTCAAGGTTCATTGTCACCAAAT
TTTACTAAGTTGTCTAAGTTAAAAGAACTTCAGCTAGGTGTTAACATGTTTTCTGGTTTA
ATTCCTGATGAAATTGGCTTGATTACTAGTCTTGAAGTTCTTGTACTTTTCAACAATTCA
TTTGAAGGAAAGATTCCATCTTCTATAGGTAGACTCATAAATCTTCAAAAGTTGGATCTT
CGAAAGAACGATTTGAATTCAACTATTCCTTCTGAGCTTGGCTTTTGTACTAAACTCACT
CTCTTAGCTCTAGCAGAAAATGACCTGCAAGGGTCATTGCCTTTATCATTCTCCTCTCTT
GCAAAGTTATCTGATTTGGGGTTGTCTGATAATAGTCTTTCTGGTGAAATCTCATCGAAT
TTCATCACCAATTGGACTGAGTTGACATCTTTGCAGCTTCAAAACAATATGTTTACAGGG
AAAATCCCACCCGAAACCAGTCAATTGACAAACCTTGTATATCTTTACCTCTATCATAAC
AATTTCACTGGTTCCATTCCCTATCAGATTGGGAACTTGCAAAACTTGTTGGATTTAGAC
TTTTCTGATAACCAGCTTTCAGGCATAATACCTCCAACCATTGGAAATCTGACCAATCTA
AAGATGTTGCAACTTTTTCGCAACAATCTCAGTGGAACCATTCCTCCTGAGATTGGAAAA
TTGATATCCCTTGAAACCATCGACATCAATACCAACCGACTAAGTGGTGAGCTGCCGGAC
AGCATTTCTGACCTCAGTGAGCTGAAGTTTCTTTCTGTATATACTAATGATTTCTCAGGC
AGTGTCCCTAAGGACTTTGGAAAGAACAGTCCTCAATTGTCAAGTGCCAGCTTTGCAAAT
AACAGCTTCACTGGTGAACTACCTGCTGGATTGTGTAGCCCGAATCTTGAGGAGTTGACG
ATAAATGGGAACAAATTCAGTGGGAAGTTACCAGATTGCTTGAAGAACTGCACACTTCTA
AGACGAGTACGGCTTGAAGGCAACAATTTATCTGGTAATCTTGCAGATGCATTTGGAGTG
CACCCGAAACTTGTTTTCCTTTCTCTTAGTGACAACCAACTTTCAGGTGAACTCTCACCT
GACTGGGGGAAATGTGAAAATCTCACAAGTCTAAGAATGGATGGAAACAAATTTTCTGGT
GTAATCCCAAGTGAGCTAGGGAACCTGAGAGCGTTGCGCGTGTTAGCTTTGGAAGGAAAT
GAATTGACTGGTGAAATTCCCTCTGAACTGGGAAGGTTAGACCTGCTCTATAATCTCAGC
TTGAGTAAAAACAATCTTACTGGAGGCATCCCTCAGTCTGTTGGCAATTTAACTAAGCTC
CAGTATCTTGATTTGTCGACAAACAAGTTAAGTGGTAACACACCAGTAGATCTTGGGAAG
TGTGAGAGCCTGTTGAGCTTGAATCTTGGCAACAACTCATTATCAGGTGGCATTCCATCT
GACCTTGGTAATTTGATGCAGTTGAGTATTCTTTTGGACTTGAGTGGCAATTCACTAACG
GGAACCATTCCACAAAACTTGGCCAAACTCACCTCATTAATGCATCTCAACCTCTCACAT
AACAACCTCTCAGGTAGAATTCCTCCAGCATTATCTCAGATGATCAGTCTTCAGGAGATG
GATTTTTCCTACAATGAGTTTTCTGGACCAATCCCAACCGATGGAGTATTTCAAAGAGCA
CCCGCTAGATCTTTTCTTGGAAACTCTGGTTTGTGTGGAAATGTAGAGGGATTATCCTCA
TGTAATTTGGATACTCCCAATGACAAGTCCAGAAATAATAATCAAAAGATCCTCATTGGG
GTACTTGTACCGGTGGTCAGCCTCATACTTTTGGCAATCCTGTTTGTTGCATGTCTCGTG
TCTCGAAGGAAGGCTAAGCAATATGATGAGGAGATCAAAGCTAGCCAGATACATGAAAAT
ACAGAATCTCTGATTTGGGAAAGAGAAGGGAAGTTTACATTTGGTGACATAGTGAAAGCT
ACTGAAGATTTCAGTGAAAAGAACTGCATTGGAAGAGGAGGCTTTGGAAGTGTCTATAAA
GCTGTTTTGCCCTCTGGGCAGATTGTTGCAGTCAAAAGACTCAACATGTCAGACTCAAGT
GATATTCCATTGACTAATCGTCGAAGCTTTGAGAATGAGATTAGAACTTTGACAGAGGTG
AGACACAGGAATATAATTAAGCTCTTTGGTTACTGTTCCAAGAATGGATGCATGTACTTG
GTTTATGAGTACATAGAAAGAGGTAGCCTGGGGAAAGTTCTATATGACAATGAGATGGGA
ATGGAACTTGGATGGGGTACAAGAGTGAAAATTGTGCAAGGAATAGCTCATGCACTCGCT
TACTTGCATCATGACTGCTCTCCGCCCATTGTTCACCGTGATGTATCATTGAATAACATT
TTGCTTGAATCAGAATTCGAGCCACGACTCTCTGACTTTGGCACAGCAAAGTTGTTAGCT
TCAGACTCATCAAATTGGACCACAGTTGCTGGTTCTTATGGCTATATGGCACCAGAGCTT
GCACTTACCATGCGTGTTACAGAAAAGTGTGATGTTTATAGTTTTGGAGTCGTAGCGATG
GAGACTATGATGGGAAGGCATCCAGGGGAGCTTTTAACTTCATTATCAGCATCAACAACA
TTGTTTCCAGAAATACTTTTGAAGGATGTTCTTGACCAAAGACTTCCACCTCCCACAGGC
CACTTGGCAGAGGCAGTGGTTTTTGTGATCACGATTGCCTTGGCATGTACACGTACCACT
CCTGAATCGCGACCAACCATGCGTTCTGTAGCACAAGAATTGTCTGTTCAGACTTTGCCT
TACCTTCCACAGCCATTGGGGACAATAGAAATGAGCAAACTAACAAGTTTTCAGAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400006759
PEP Infomation

pacid=37455626 transcript=PGSC0003DMT400009696 locus=PGSC0003DMG400003790 ID=PGSC0003DMT400009696.v4.03 annot-version=v4.03
Sequence

MTTFHTTLVYILYVLLLFSLPLSITSSARTEAESLVKWKRNLPSTSFLDTWSISNLENLC
NWTYIVCNDGGTISEINLSDAALSGTLDHLDFTSFPSLVNFNLNGNNFSGSIPSSIGNAS
LLTFLDLSNNILSGVIPEEIGKLNQLEYLSFYNNNIEGVMPYQISNLQKVMHLDLGSNFL
ETPDWLKMRNMPVLTYLSFGYNELRLEFPEFVLRCHNLTYLDLSINHFNGSIPETVFTNL
INLERLNLSSNSFQGSLSPNFTKLSKLKELQLGVNMFSGLIPDEIGLITSLEVLVLFNNS
FEGKIPSSIGRLINLQKLDLRKNDLNSTIPSELGFCTKLTLLALAENDLQGSLPLSFSSL
AKLSDLGLSDNSLSGEISSNFITNWTELTSLQLQNNMFTGKIPPETSQLTNLVYLYLYHN
NFTGSIPYQIGNLQNLLDLDFSDNQLSGIIPPTIGNLTNLKMLQLFRNNLSGTIPPEIGK
LISLETIDINTNRLSGELPDSISDLSELKFLSVYTNDFSGSVPKDFGKNSPQLSSASFAN
NSFTGELPAGLCSPNLEELTINGNKFSGKLPDCLKNCTLLRRVRLEGNNLSGNLADAFGV
HPKLVFLSLSDNQLSGELSPDWGKCENLTSLRMDGNKFSGVIPSELGNLRALRVLALEGN
ELTGEIPSELGRLDLLYNLSLSKNNLTGGIPQSVGNLTKLQYLDLSTNKLSGNTPVDLGK
CESLLSLNLGNNSLSGGIPSDLGNLMQLSILLDLSGNSLTGTIPQNLAKLTSLMHLNLSH
NNLSGRIPPALSQMISLQEMDFSYNEFSGPIPTDGVFQRAPARSFLGNSGLCGNVEGLSS
CNLDTPNDKSRNNNQKILIGVLVPVVSLILLAILFVACLVSRRKAKQYDEEIKASQIHEN
TESLIWEREGKFTFGDIVKATEDFSEKNCIGRGGFGSVYKAVLPSGQIVAVKRLNMSDSS
DIPLTNRRSFENEIRTLTEVRHRNIIKLFGYCSKNGCMYLVYEYIERGSLGKVLYDNEMG
MELGWGTRVKIVQGIAHALAYLHHDCSPPIVHRDVSLNNILLESEFEPRLSDFGTAKLLA
SDSSNWTTVAGSYGYMAPELALTMRVTEKCDVYSFGVVAMETMMGRHPGELLTSLSASTT
LFPEILLKDVLDQRLPPPTGHLAEAVVFVITIALACTRTTPESRPTMRSVAQELSVQTLP
YLPQPLGTIEMSKLTSFQK*

Transcript Sequence

Transcript ID

PGSC0003DMT400009696
Transcript Infomation

pacid=37455626 locus=PGSC0003DMG400003790 ID=PGSC0003DMT400009696.v4.03 annot-version=v4.03
Sequence

ATGACAACATTTCATACTACCTTAGTTTACATCTTGTATGTGCTACTTCTTTTTTCACTT
CCATTAAGTATCACATCTTCAGCAAGAACAGAAGCTGAATCTCTTGTCAAATGGAAGAGA
AATTTACCTTCTACTTCTTTCTTGGACACATGGTCCATTTCGAATCTCGAAAACTTGTGC
AATTGGACATATATTGTGTGTAATGATGGTGGAACAATTTCTGAGATCAATCTTTCTGAT
GCAGCCCTCTCAGGCACACTTGATCACCTTGATTTCACTTCATTTCCGAGTCTCGTGAAT
TTCAATCTTAATGGAAATAACTTCAGTGGATCGATACCTTCGAGTATTGGCAATGCCTCA
TTGCTCACATTCTTGGACCTGAGTAACAATATCTTATCAGGTGTCATACCTGAAGAGATT
GGAAAATTGAATCAACTTGAGTATCTGAGTTTTTATAACAACAATATCGAAGGTGTGATG
CCGTATCAGATTAGCAATCTGCAGAAGGTAATGCACTTGGATCTTGGATCAAATTTCTTA
GAAACTCCTGATTGGTTGAAGATGAGAAATATGCCTGTGTTGACGTATCTAAGCTTTGGT
TATAATGAACTGAGGTTAGAATTCCCTGAATTCGTACTTCGTTGTCATAATCTAACATAT
CTTGATTTATCGATAAATCATTTCAATGGTTCGATTCCTGAAACAGTATTTACCAACTTG
ATCAACCTTGAAAGACTTAATCTTTCATCTAATTCATTTCAAGGTTCATTGTCACCAAAT
TTTACTAAGTTGTCTAAGTTAAAAGAACTTCAGCTAGGTGTTAACATGTTTTCTGGTTTA
ATTCCTGATGAAATTGGCTTGATTACTAGTCTTGAAGTTCTTGTACTTTTCAACAATTCA
TTTGAAGGAAAGATTCCATCTTCTATAGGTAGACTCATAAATCTTCAAAAGTTGGATCTT
CGAAAGAACGATTTGAATTCAACTATTCCTTCTGAGCTTGGCTTTTGTACTAAACTCACT
CTCTTAGCTCTAGCAGAAAATGACCTGCAAGGGTCATTGCCTTTATCATTCTCCTCTCTT
GCAAAGTTATCTGATTTGGGGTTGTCTGATAATAGTCTTTCTGGTGAAATCTCATCGAAT
TTCATCACCAATTGGACTGAGTTGACATCTTTGCAGCTTCAAAACAATATGTTTACAGGG
AAAATCCCACCCGAAACCAGTCAATTGACAAACCTTGTATATCTTTACCTCTATCATAAC
AATTTCACTGGTTCCATTCCCTATCAGATTGGGAACTTGCAAAACTTGTTGGATTTAGAC
TTTTCTGATAACCAGCTTTCAGGCATAATACCTCCAACCATTGGAAATCTGACCAATCTA
AAGATGTTGCAACTTTTTCGCAACAATCTCAGTGGAACCATTCCTCCTGAGATTGGAAAA
TTGATATCCCTTGAAACCATCGACATCAATACCAACCGACTAAGTGGTGAGCTGCCGGAC
AGCATTTCTGACCTCAGTGAGCTGAAGTTTCTTTCTGTATATACTAATGATTTCTCAGGC
AGTGTCCCTAAGGACTTTGGAAAGAACAGTCCTCAATTGTCAAGTGCCAGCTTTGCAAAT
AACAGCTTCACTGGTGAACTACCTGCTGGATTGTGTAGCCCGAATCTTGAGGAGTTGACG
ATAAATGGGAACAAATTCAGTGGGAAGTTACCAGATTGCTTGAAGAACTGCACACTTCTA
AGACGAGTACGGCTTGAAGGCAACAATTTATCTGGTAATCTTGCAGATGCATTTGGAGTG
CACCCGAAACTTGTTTTCCTTTCTCTTAGTGACAACCAACTTTCAGGTGAACTCTCACCT
GACTGGGGGAAATGTGAAAATCTCACAAGTCTAAGAATGGATGGAAACAAATTTTCTGGT
GTAATCCCAAGTGAGCTAGGGAACCTGAGAGCGTTGCGCGTGTTAGCTTTGGAAGGAAAT
GAATTGACTGGTGAAATTCCCTCTGAACTGGGAAGGTTAGACCTGCTCTATAATCTCAGC
TTGAGTAAAAACAATCTTACTGGAGGCATCCCTCAGTCTGTTGGCAATTTAACTAAGCTC
CAGTATCTTGATTTGTCGACAAACAAGTTAAGTGGTAACACACCAGTAGATCTTGGGAAG
TGTGAGAGCCTGTTGAGCTTGAATCTTGGCAACAACTCATTATCAGGTGGCATTCCATCT
GACCTTGGTAATTTGATGCAGTTGAGTATTCTTTTGGACTTGAGTGGCAATTCACTAACG
GGAACCATTCCACAAAACTTGGCCAAACTCACCTCATTAATGCATCTCAACCTCTCACAT
AACAACCTCTCAGGTAGAATTCCTCCAGCATTATCTCAGATGATCAGTCTTCAGGAGATG
GATTTTTCCTACAATGAGTTTTCTGGACCAATCCCAACCGATGGAGTATTTCAAAGAGCA
CCCGCTAGATCTTTTCTTGGAAACTCTGGTTTGTGTGGAAATGTAGAGGGATTATCCTCA
TGTAATTTGGATACTCCCAATGACAAGTCCAGAAATAATAATCAAAAGATCCTCATTGGG
GTACTTGTACCGGTGGTCAGCCTCATACTTTTGGCAATCCTGTTTGTTGCATGTCTCGTG
TCTCGAAGGAAGGCTAAGCAATATGATGAGGAGATCAAAGCTAGCCAGATACATGAAAAT
ACAGAATCTCTGATTTGGGAAAGAGAAGGGAAGTTTACATTTGGTGACATAGTGAAAGCT
ACTGAAGATTTCAGTGAAAAGAACTGCATTGGAAGAGGAGGCTTTGGAAGTGTCTATAAA
GCTGTTTTGCCCTCTGGGCAGATTGTTGCAGTCAAAAGACTCAACATGTCAGACTCAAGT
GATATTCCATTGACTAATCGTCGAAGCTTTGAGAATGAGATTAGAACTTTGACAGAGGTG
AGACACAGGAATATAATTAAGCTCTTTGGTTACTGTTCCAAGAATGGATGCATGTACTTG
GTTTATGAGTACATAGAAAGAGGTAGCCTGGGGAAAGTTCTATATGACAATGAGATGGGA
ATGGAACTTGGATGGGGTACAAGAGTGAAAATTGTGCAAGGAATAGCTCATGCACTCGCT
TACTTGCATCATGACTGCTCTCCGCCCATTGTTCACCGTGATGTATCATTGAATAACATT
TTGCTTGAATCAGAATTCGAGCCACGACTCTCTGACTTTGGCACAGCAAAGTTGTTAGCT
TCAGACTCATCAAATTGGACCACAGTTGCTGGTTCTTATGGCTATATGGCACCAGAGCTT
GCACTTACCATGCGTGTTACAGAAAAGTGTGATGTTTATAGTTTTGGAGTCGTAGCGATG
GAGACTATGATGGGAAGGCATCCAGGGGAGCTTTTAACTTCATTATCAGCATCAACAACA
TTGTTTCCAGAAATACTTTTGAAGGATGTTCTTGACCAAAGACTTCCACCTCCCACAGGC
CACTTGGCAGAGGCAGTGGTTTTTGTGATCACGATTGCCTTGGCATGTACACGTACCACT
CCTGAATCGCGACCAACCATGCGTTCTGTAGCACAAGAATTGTCTGTTCAGACTTTGCCT
TACCTTCCACAGCCATTGGGGACAATAGAAATGAGCAAACTAACAAGTTTTCAGAAATAA