Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009695
CDS Infomation

pacid=37456445 polypeptide=PGSC0003DMP400006758 locus=PGSC0003DMG400003789 ID=PGSC0003DMT400009695.v4.03 annot-version=v4.03
Sequence

ATGGGTTGTTTTCTTGGGTGTTTTGGTGGTGATAAGGAGAAGAAATGCCGGAAAAACAGG
AAAAAGGTCATCCCTCGAGAACAAAAACATATTTGTCAGGATGCTCAGAGAAGCATTATC
TCTACAGAACAAAGCATCACAGAGGAACCCTCTGGGAGCTTGGTTACCGAGGCGCGAGAT
AGGCCTGAGGAACAACTTAGCTTGAGTGCTAGAAAAAAAGTTACATTTGATTCAAAGATC
ACTACATATGAACCTGTTTCAATCTATGAAAGTACAGATTCTTTACCTGAAACCAAGAAA
TCTGGTGAAGAAGAAAGAGAGGAAGAGGGATCTCTTGCTAAATCAAGCAAGTCCAACTCT
TCCTCTGAAGGGGGTTCTGTTGTATCTAGTGTAGGATCATATCCTACAAACCACAGGTAT
CAGAACTGTCAAGACAGTGATGATGAAGCTGAGGAGTTTGGTGACAGTGACGTGGACGAA
GAATGTGATTTGGATGATGATGAAGAGTACGGGGATTCCGATTGTGAAGGTGGACAAGTG
TGGTCTGAATCAGTGGTGGCTGATAAGTCCTTTTATCAAGTGAAAGAACAGGAAGTGGAT
AGTCCTACTTTGATGTTCGGTGTCCCTGAGAAGGAAATGAGAAAGGGTGAAACAAAAGGA
TATGTGAGAGATAGGAGTGCTTACATCCATCCTGTGTTGAACCCTGTAGAGAACCTCAGT
CAGTGGAAAAGTGTTAAATCAAAAGCAGCAGAACCCATGAAGCTATTGCCACAGAAGGAA
AATTGTACCGCAGAAGTAGAAGGGCCTCGTGCTTCGTTCAGTTTAGAACCTACATTTAAG
CAATCATCATTTAGTTTCAAGACAAAGCCTAAAGATCAAGAAATTGGGGTTGATGCTAGT
CTTTCAAATTGGTTGGTTACACCTGACACCACCAAGAAGGCTGGCTCCAGCGCGCTTGAG
ACTGTTACATCAGAAAAAAGCATGTCACAAGGTTCTAACTCTATGATGAGCTTTGAAGAC
AGGCCAATTTTAGGTGTCTTAACAGTTGAGCAGCTGAAACAGCATTCAGCAACTTCCTCC
CCGAGGAAATCACCCTGTCGAAGCCCTGATGAGATGCCTATTATAGGAACTGTTGGCACC
TACTGGAATCCCTTAGGATCTGCTAAAGACTCTGGGTCAGTTTCTTCTTTTAAAGGCATA
CCAAACTCGACGAGCAAGTACAGAGAGGATAAGAGAGTTAATTGGCACTCTACTCCATTT
GAGGCAAGATTAGACAGAGCCTTGAAAGAAGGTGCCACAGAAGCCTCTATAGCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400006758
PEP Infomation

pacid=37456445 transcript=PGSC0003DMT400009695 locus=PGSC0003DMG400003789 ID=PGSC0003DMT400009695.v4.03 annot-version=v4.03
Sequence

MGCFLGCFGGDKEKKCRKNRKKVIPREQKHICQDAQRSIISTEQSITEEPSGSLVTEARD
RPEEQLSLSARKKVTFDSKITTYEPVSIYESTDSLPETKKSGEEEREEEGSLAKSSKSNS
SSEGGSVVSSVGSYPTNHRYQNCQDSDDEAEEFGDSDVDEECDLDDDEEYGDSDCEGGQV
WSESVVADKSFYQVKEQEVDSPTLMFGVPEKEMRKGETKGYVRDRSAYIHPVLNPVENLS
QWKSVKSKAAEPMKLLPQKENCTAEVEGPRASFSLEPTFKQSSFSFKTKPKDQEIGVDAS
LSNWLVTPDTTKKAGSSALETVTSEKSMSQGSNSMMSFEDRPILGVLTVEQLKQHSATSS
PRKSPCRSPDEMPIIGTVGTYWNPLGSAKDSGSVSSFKGIPNSTSKYREDKRVNWHSTPF
EARLDRALKEGATEASIA*

Transcript Sequence

Transcript ID

PGSC0003DMT400009695
Transcript Infomation

pacid=37456445 locus=PGSC0003DMG400003789 ID=PGSC0003DMT400009695.v4.03 annot-version=v4.03
Sequence

ATGGGTTGTTTTCTTGGGTGTTTTGGTGGTGATAAGGAGAAGAAATGCCGGAAAAACAGG
AAAAAGGTCATCCCTCGAGAACAAAAACATATTTGTCAGGATGCTCAGAGAAGCATTATC
TCTACAGAACAAAGCATCACAGAGGAACCCTCTGGGAGCTTGGTTACCGAGGCGCGAGAT
AGGCCTGAGGAACAACTTAGCTTGAGTGCTAGAAAAAAAGTTACATTTGATTCAAAGATC
ACTACATATGAACCTGTTTCAATCTATGAAAGTACAGATTCTTTACCTGAAACCAAGAAA
TCTGGTGAAGAAGAAAGAGAGGAAGAGGGATCTCTTGCTAAATCAAGCAAGTCCAACTCT
TCCTCTGAAGGGGGTTCTGTTGTATCTAGTGTAGGATCATATCCTACAAACCACAGGTAT
CAGAACTGTCAAGACAGTGATGATGAAGCTGAGGAGTTTGGTGACAGTGACGTGGACGAA
GAATGTGATTTGGATGATGATGAAGAGTACGGGGATTCCGATTGTGAAGGTGGACAAGTG
TGGTCTGAATCAGTGGTGGCTGATAAGTCCTTTTATCAAGTGAAAGAACAGGAAGTGGAT
AGTCCTACTTTGATGTTCGGTGTCCCTGAGAAGGAAATGAGAAAGGGTGAAACAAAAGGA
TATGTGAGAGATAGGAGTGCTTACATCCATCCTGTGTTGAACCCTGTAGAGAACCTCAGT
CAGTGGAAAAGTGTTAAATCAAAAGCAGCAGAACCCATGAAGCTATTGCCACAGAAGGAA
AATTGTACCGCAGAAGTAGAAGGGCCTCGTGCTTCGTTCAGTTTAGAACCTACATTTAAG
CAATCATCATTTAGTTTCAAGACAAAGCCTAAAGATCAAGAAATTGGGGTTGATGCTAGT
CTTTCAAATTGGTTGGTTACACCTGACACCACCAAGAAGGCTGGCTCCAGCGCGCTTGAG
ACTGTTACATCAGAAAAAAGCATGTCACAAGGTTCTAACTCTATGATGAGCTTTGAAGAC
AGGCCAATTTTAGGTGTCTTAACAGTTGAGCAGCTGAAACAGCATTCAGCAACTTCCTCC
CCGAGGAAATCACCCTGTCGAAGCCCTGATGAGATGCCTATTATAGGAACTGTTGGCACC
TACTGGAATCCCTTAGGATCTGCTAAAGACTCTGGGTCAGTTTCTTCTTTTAAAGGCATA
CCAAACTCGACGAGCAAGTACAGAGAGGATAAGAGAGTTAATTGGCACTCTACTCCATTT
GAGGCAAGATTAGACAGAGCCTTGAAAGAAGGTGCCACAGAAGCCTCTATAGCTTGA