Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009684
CDS Infomation

pacid=37474281 polypeptide=PGSC0003DMP400006751 locus=PGSC0003DMG400003779 ID=PGSC0003DMT400009684.v4.03 annot-version=v4.03
Sequence

ATGTCGATTGAAAAAGCGGTTGATGAGGATTTGAAGCAAAATCATAATAGTAGATTAACT
TATGAAGGTTGCAATGTATTGCTTGACATCAATGATGGCGACCGTTTAGTTTTTTCTCGT
CTTACTGCTGCCTCGACATTGAAAATTGGGAATAAGAAGTGTTCTCTTCAGCCTCTTATA
GGTTGTCCATTCGGGTCTCTGTTTCAAGTGGAGTCGGGAAAAGAAGGAACCTTTTTGACT
CGTTTTGTTGAGAATGCAGAAGGTAACGGCCTTGAAGAAAAAGATGTGGATGGATCTAAA
GACAACCGTGCGCTTGTTGATAATAATACTGCTCAGAGTCTCACTAGTGAAGATATCGAC
GAGATGCGAAATCAGGGGGCAAAAGGGGATGAAATAGTTGAAGCACTCATTGCAAACAGT
GCAACTTTTGAGAAGAAGACATTATTTTCACAAGAAAAGTATAGGGTTAAGAAACAGAAG
AAATATGCACCTCGAGTACTATTGAGGCGTCCCTTTGCACGAAGCATTTGTGAGGCCTAC
TTCAAGAAACATCCTGAAAAAATCGGATTCATGCGAGTGGATTCACTATCTCTACTACTC
TGCTTGGGGAATGTTACTGCAAATGCAGATGTACTTGTAGTGGACATGCTCGGTGGTATT
CTTACTGGTGCTATTGCGGAACGACTAGGAGGTACTGGTTATGTGTGCAATACTTATCGT
GGATCGTCACCATATCCTGTCGATATCACAAGGATGTTTAATTTAAGTGATGAAATCTGT
AAAAGAATTGTGCATGCATCACTGACCGACCTGAATTCATTTCAAACTGGAGCCTTAGTG
TCTGAGGGTCAGGAAGAAACCTTACCTGTCACTCATTCTAGCGGTCTAGAAGAAGTTGGT
ATGTCAGCTGAAGATGGTGGCATGGATATAACACCTGAGAGAGTTCCTTCTCCAATAATC
AAGCCTGTTAAATCCATAAAACCAGGTCAGAAAGCACCTCTCGAAGCCATCAAGTTGTGG
AAAGAAAATGGTTTTTCCAGCCTAATAATTGCTGCTCCGGAACTGGACCCATGGGGCATT
ATTAAAGAAGTGCTTCCTCTTTTATCATTTTCAGCTCCTTTTGCTGTTTATCACCAGTAT
GCTCAGCCTCTAGCTACGTGTATGCACAACCTGCAGATTGAGAAAATGGCGATTGGATTA
CAAATTTCTGAACCTTGGCTACGTGAATATCAGGTACTCCCATCAAGAACCCATCCACAT
ATGCAGATGAGCGCGTTTGGTGGTTATATACTAAGTGGCACGAAAATATCTAGCAGCGAC
TCCGTTACCAACTCCAACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400006751
PEP Infomation

pacid=37474281 transcript=PGSC0003DMT400009684 locus=PGSC0003DMG400003779 ID=PGSC0003DMT400009684.v4.03 annot-version=v4.03
Sequence

MSIEKAVDEDLKQNHNSRLTYEGCNVLLDINDGDRLVFSRLTAASTLKIGNKKCSLQPLI
GCPFGSLFQVESGKEGTFLTRFVENAEGNGLEEKDVDGSKDNRALVDNNTAQSLTSEDID
EMRNQGAKGDEIVEALIANSATFEKKTLFSQEKYRVKKQKKYAPRVLLRRPFARSICEAY
FKKHPEKIGFMRVDSLSLLLCLGNVTANADVLVVDMLGGILTGAIAERLGGTGYVCNTYR
GSSPYPVDITRMFNLSDEICKRIVHASLTDLNSFQTGALVSEGQEETLPVTHSSGLEEVG
MSAEDGGMDITPERVPSPIIKPVKSIKPGQKAPLEAIKLWKENGFSSLIIAAPELDPWGI
IKEVLPLLSFSAPFAVYHQYAQPLATCMHNLQIEKMAIGLQISEPWLREYQVLPSRTHPH
MQMSAFGGYILSGTKISSSDSVTNSN*

Transcript Sequence

Transcript ID

PGSC0003DMT400009684
Transcript Infomation

pacid=37474281 locus=PGSC0003DMG400003779 ID=PGSC0003DMT400009684.v4.03 annot-version=v4.03
Sequence

ATGTCGATTGAAAAAGCGGTTGATGAGGATTTGAAGCAAAATCATAATAGTAGATTAACT
TATGAAGGTTGCAATGTATTGCTTGACATCAATGATGGCGACCGTTTAGTTTTTTCTCGT
CTTACTGCTGCCTCGACATTGAAAATTGGGAATAAGAAGTGTTCTCTTCAGCCTCTTATA
GGTTGTCCATTCGGGTCTCTGTTTCAAGTGGAGTCGGGAAAAGAAGGAACCTTTTTGACT
CGTTTTGTTGAGAATGCAGAAGGTAACGGCCTTGAAGAAAAAGATGTGGATGGATCTAAA
GACAACCGTGCGCTTGTTGATAATAATACTGCTCAGAGTCTCACTAGTGAAGATATCGAC
GAGATGCGAAATCAGGGGGCAAAAGGGGATGAAATAGTTGAAGCACTCATTGCAAACAGT
GCAACTTTTGAGAAGAAGACATTATTTTCACAAGAAAAGTATAGGGTTAAGAAACAGAAG
AAATATGCACCTCGAGTACTATTGAGGCGTCCCTTTGCACGAAGCATTTGTGAGGCCTAC
TTCAAGAAACATCCTGAAAAAATCGGATTCATGCGAGTGGATTCACTATCTCTACTACTC
TGCTTGGGGAATGTTACTGCAAATGCAGATGTACTTGTAGTGGACATGCTCGGTGGTATT
CTTACTGGTGCTATTGCGGAACGACTAGGAGGTACTGGTTATGTGTGCAATACTTATCGT
GGATCGTCACCATATCCTGTCGATATCACAAGGATGTTTAATTTAAGTGATGAAATCTGT
AAAAGAATTGTGCATGCATCACTGACCGACCTGAATTCATTTCAAACTGGAGCCTTAGTG
TCTGAGGGTCAGGAAGAAACCTTACCTGTCACTCATTCTAGCGGTCTAGAAGAAGTTGGT
ATGTCAGCTGAAGATGGTGGCATGGATATAACACCTGAGAGAGTTCCTTCTCCAATAATC
AAGCCTGTTAAATCCATAAAACCAGGTCAGAAAGCACCTCTCGAAGCCATCAAGTTGTGG
AAAGAAAATGGTTTTTCCAGCCTAATAATTGCTGCTCCGGAACTGGACCCATGGGGCATT
ATTAAAGAAGTGCTTCCTCTTTTATCATTTTCAGCTCCTTTTGCTGTTTATCACCAGTAT
GCTCAGCCTCTAGCTACGTGTATGCACAACCTGCAGATTGAGAAAATGGCGATTGGATTA
CAAATTTCTGAACCTTGGCTACGTGAATATCAGGTACTCCCATCAAGAACCCATCCACAT
ATGCAGATGAGCGCGTTTGGTGGTTATATACTAAGTGGCACGAAAATATCTAGCAGCGAC
TCCGTTACCAACTCCAACTAG