Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009667
CDS Infomation

pacid=37474626 polypeptide=PGSC0003DMP400006740 locus=PGSC0003DMG400003774 ID=PGSC0003DMT400009667.v4.03 annot-version=v4.03
Sequence

ATGGGAGAGAAATCAAAAAAAGGGGGTTGGTGTGGATGGATTATAGTTTTGATAGTGGCT
GCTGCGGCTGCTGGAGCCATTGTGGTACTTGTTATGAAGAAGCATAAAGATTCTAGCTCA
GATGCTGCTTCTGGTGCTTCTGAAAAGAAATATGGAGATGCTCTGAAAATTGCAATGCAG
TTCTTTGATGTCCAAAAATCTGGGAAATTGGTAAATAATAAGATACCATGGAGAGGCGAT
TCAGCCATCAAAGATGGAAGTCAAGAAAAGTTAGACCTCAGTCAAGGAATGTATGATGCT
GGCGACCACATGAAATTTAATTTCCCAATGGCTTACACTGCCACTGTGTTGTCATGGGCC
ATCCTTGAGTATGGTGATCAGATGAAAGGTGTGGGCCAGTTGGAACCTGCTCAAGACTCA
CTCAAATGGATTACGGACTATCTTATCAATTGTCATCCAAAAGATAATGTTCTTTATATT
CAGGTGGGTGATGCTAATGCTGACCATAAATGTTGGGACAGACCCGAGGACATAACTGAG
GCGAGGCCTCTTATTCAGATAAATGCTTCTACCCCTGGAACAGAAGTTGCAGCTGAAACT
GCAGCAGCTATGGCAGCAGCATCCCTGGTGTTCAAGTCGAAGAACTCAGGATACTCAAGT
AACCTTCTTAAGCATGCTAAACAGTTGTTTACTTTTGCTGATAGATATAGAGGTACCTAC
AGTGAAAATATTCCTGAAGTCGCAACATATTACAATTCAACTGGATATGGAGATGAGCTC
TTGTGGGCAGCAAGTTGGCTATATCATGCAACTGGGGATCAAACATATTTTGATTACGCG
ACTGGGAAAAATGCAGATTCTTTTGGTAATTTTGGAAATCCAACTTGGTTTAGCTGGGAT
AACAAGCTAGCTGGTACCCAGGTTCTTTTATCCCGGGTCAGCTTCTTTAATTCGAAAGTC
TCAAACTCGGACACACTTCAAGAGTATAGGAAAACTGCAGAAGCTGTAATGTGTGGTCTC
TTACCAAAATCTCCCACAGCAACATCCAGCAGAACTGATAGTGGTTTGATATGGATAACT
CAATGGAACGCGTTGCAGCATCCTGTAGCCTCTGCCTTCTTAGCTGTGGTGTACAGTGAT
TATATGCTCACTTCCAAGACTGGAAAAATGACTTGTGATGGTAATGAATATACACCATCT
GATCTCAGAAAGTTCGCCATGTCCCAGGCCAATTATGTATTGGGCGACAATCCAGCAAAG
ATGAGTTATCTCGTAGGCTATGGGGACAAATATCCACAGTATGTTCACCACAGAGGGGCT
TCCATTCCTACAGATGCCGATACTAATTGCAAAGAAGGTTGGAAGTATCTAGACTCAACT
GAACCAAATCCCAACGTTGCAACTGGAGCCCTCGTTGGTGGTCCATTTCTTAATGAGACA
TATATCGATTCAAGGAACAACTCGATTCAAGGAGAGCCAACCACATACAATAGTGCTGTC
ATTGTTGGCCTTCTTTCTGGTTTGGTTTCCACTTCCTCAGTGGTTCAGTCTTTCACCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400006740
PEP Infomation

pacid=37474626 transcript=PGSC0003DMT400009667 locus=PGSC0003DMG400003774 ID=PGSC0003DMT400009667.v4.03 annot-version=v4.03
Sequence

MGEKSKKGGWCGWIIVLIVAAAAAGAIVVLVMKKHKDSSSDAASGASEKKYGDALKIAMQ
FFDVQKSGKLVNNKIPWRGDSAIKDGSQEKLDLSQGMYDAGDHMKFNFPMAYTATVLSWA
ILEYGDQMKGVGQLEPAQDSLKWITDYLINCHPKDNVLYIQVGDANADHKCWDRPEDITE
ARPLIQINASTPGTEVAAETAAAMAAASLVFKSKNSGYSSNLLKHAKQLFTFADRYRGTY
SENIPEVATYYNSTGYGDELLWAASWLYHATGDQTYFDYATGKNADSFGNFGNPTWFSWD
NKLAGTQVLLSRVSFFNSKVSNSDTLQEYRKTAEAVMCGLLPKSPTATSSRTDSGLIWIT
QWNALQHPVASAFLAVVYSDYMLTSKTGKMTCDGNEYTPSDLRKFAMSQANYVLGDNPAK
MSYLVGYGDKYPQYVHHRGASIPTDADTNCKEGWKYLDSTEPNPNVATGALVGGPFLNET
YIDSRNNSIQGEPTTYNSAVIVGLLSGLVSTSSVVQSFT*

Transcript Sequence

Transcript ID

PGSC0003DMT400009667
Transcript Infomation

pacid=37474626 locus=PGSC0003DMG400003774 ID=PGSC0003DMT400009667.v4.03 annot-version=v4.03
Sequence

ATGGGAGAGAAATCAAAAAAAGGGGGTTGGTGTGGATGGATTATAGTTTTGATAGTGGCT
GCTGCGGCTGCTGGAGCCATTGTGGTACTTGTTATGAAGAAGCATAAAGATTCTAGCTCA
GATGCTGCTTCTGGTGCTTCTGAAAAGAAATATGGAGATGCTCTGAAAATTGCAATGCAG
TTCTTTGATGTCCAAAAATCTGGGAAATTGGTAAATAATAAGATACCATGGAGAGGCGAT
TCAGCCATCAAAGATGGAAGTCAAGAAAAGTTAGACCTCAGTCAAGGAATGTATGATGCT
GGCGACCACATGAAATTTAATTTCCCAATGGCTTACACTGCCACTGTGTTGTCATGGGCC
ATCCTTGAGTATGGTGATCAGATGAAAGGTGTGGGCCAGTTGGAACCTGCTCAAGACTCA
CTCAAATGGATTACGGACTATCTTATCAATTGTCATCCAAAAGATAATGTTCTTTATATT
CAGGTGGGTGATGCTAATGCTGACCATAAATGTTGGGACAGACCCGAGGACATAACTGAG
GCGAGGCCTCTTATTCAGATAAATGCTTCTACCCCTGGAACAGAAGTTGCAGCTGAAACT
GCAGCAGCTATGGCAGCAGCATCCCTGGTGTTCAAGTCGAAGAACTCAGGATACTCAAGT
AACCTTCTTAAGCATGCTAAACAGTTGTTTACTTTTGCTGATAGATATAGAGGTACCTAC
AGTGAAAATATTCCTGAAGTCGCAACATATTACAATTCAACTGGATATGGAGATGAGCTC
TTGTGGGCAGCAAGTTGGCTATATCATGCAACTGGGGATCAAACATATTTTGATTACGCG
ACTGGGAAAAATGCAGATTCTTTTGGTAATTTTGGAAATCCAACTTGGTTTAGCTGGGAT
AACAAGCTAGCTGGTACCCAGGTTCTTTTATCCCGGGTCAGCTTCTTTAATTCGAAAGTC
TCAAACTCGGACACACTTCAAGAGTATAGGAAAACTGCAGAAGCTGTAATGTGTGGTCTC
TTACCAAAATCTCCCACAGCAACATCCAGCAGAACTGATAGTGGTTTGATATGGATAACT
CAATGGAACGCGTTGCAGCATCCTGTAGCCTCTGCCTTCTTAGCTGTGGTGTACAGTGAT
TATATGCTCACTTCCAAGACTGGAAAAATGACTTGTGATGGTAATGAATATACACCATCT
GATCTCAGAAAGTTCGCCATGTCCCAGGCCAATTATGTATTGGGCGACAATCCAGCAAAG
ATGAGTTATCTCGTAGGCTATGGGGACAAATATCCACAGTATGTTCACCACAGAGGGGCT
TCCATTCCTACAGATGCCGATACTAATTGCAAAGAAGGTTGGAAGTATCTAGACTCAACT
GAACCAAATCCCAACGTTGCAACTGGAGCCCTCGTTGGTGGTCCATTTCTTAATGAGACA
TATATCGATTCAAGGAACAACTCGATTCAAGGAGAGCCAACCACATACAATAGTGCTGTC
ATTGTTGGCCTTCTTTCTGGTTTGGTTTCCACTTCCTCAGTGGTTCAGTCTTTCACCTGA