Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009612
CDS Infomation

pacid=37474580 polypeptide=PGSC0003DMP400006697 locus=PGSC0003DMG400003751 ID=PGSC0003DMT400009612.v4.03 annot-version=v4.03
Sequence

ATGGTTGCTGGACTTGGTGCAGCTAAACCGTACACATCACTTGCCCTTAAAACCATATCT
CGCCAGTTTCGCTGCTTGAGGGACGCAATCAAGAAGCAGATACAAGTTACACGTCGAAGC
TTGGGGGAGCAGGGTGATAGTCAAGGGGAAAGGTTATATCGTCTCCGTTATGTGGACCAG
CAATTGAGGCAGCAAAGGTCCCTTCAGCAATTTGGAATGATGCGTCAGCCTTGGAGGCCA
CAGAGGGGCCTTCCAGAGACTGCTGTTTCAGTCCTTCGTGCTTGGCTTTTTGAACATTTC
CTCCATCCCTACCCAAAAGATTCCGAGAAAATCATGCTGGCGAGGCAAACAGGTTTAACC
AGAAGTCAGGTGGCAAACTGGTTCATAAATGCTCGAGTGCGTCTTTGGAAGCCCATGATT
GAAGATATGTACAAGGAAGAGTTTGGTGTGGCAGAAGCAGGTTCCGGAGTTTCACCAGAA
CGAGTACCGGTAGACTCCAAAGAGAAGTCAATAGCTGAAAACACAGGAGAAGAGATTCCG
GAAAGCTTTACTACTCCAGCTGCTAACTGCAGTCATCTCGATCCATCTGACGAGTCACGT
AATAATGTTACTAATGTACACAACAATTCATTTACAACCAAATTTAGCTTCCAAGACGGT
GTTTATGAACATGAGAGGATTGATTGTGGATCAAGTAAGTTGCAGAGCGAACAAATTCCT
ATTGCTCACGGCTTTGGTCCTAAACCGACTAGTGATGGAAGCATCATTGGTGCTGTCAAT
ACATACCATCCTTCCATGTTTGGTGACATAATGGGCAATCAAGTATCACTCGCTCTGCGT
CTGCAAAACAGTCAAATGGACCAGCAGCCAATGTCTGGTAGGCCACAGTTAAGACAGGAC
GAGAAGACGGATTCTACTCATATGGACATTGGTAAAGGTGAGTACTACTATATCGATCCA
GTAAACCAGCAAGAAAGGTTCTCAGGTCCTCATCTTCTATCCGATTTTGTAGTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400006697
PEP Infomation

pacid=37474580 transcript=PGSC0003DMT400009612 locus=PGSC0003DMG400003751 ID=PGSC0003DMT400009612.v4.03 annot-version=v4.03
Sequence

MVAGLGAAKPYTSLALKTISRQFRCLRDAIKKQIQVTRRSLGEQGDSQGERLYRLRYVDQ
QLRQQRSLQQFGMMRQPWRPQRGLPETAVSVLRAWLFEHFLHPYPKDSEKIMLARQTGLT
RSQVANWFINARVRLWKPMIEDMYKEEFGVAEAGSGVSPERVPVDSKEKSIAENTGEEIP
ESFTTPAANCSHLDPSDESRNNVTNVHNNSFTTKFSFQDGVYEHERIDCGSSKLQSEQIP
IAHGFGPKPTSDGSIIGAVNTYHPSMFGDIMGNQVSLALRLQNSQMDQQPMSGRPQLRQD
EKTDSTHMDIGKGEYYYIDPVNQQERFSGPHLLSDFVV*

Transcript Sequence

Transcript ID

PGSC0003DMT400009612
Transcript Infomation

pacid=37474580 locus=PGSC0003DMG400003751 ID=PGSC0003DMT400009612.v4.03 annot-version=v4.03
Sequence

ATGGTTGCTGGACTTGGTGCAGCTAAACCGTACACATCACTTGCCCTTAAAACCATATCT
CGCCAGTTTCGCTGCTTGAGGGACGCAATCAAGAAGCAGATACAAGTTACACGTCGAAGC
TTGGGGGAGCAGGGTGATAGTCAAGGGGAAAGGTTATATCGTCTCCGTTATGTGGACCAG
CAATTGAGGCAGCAAAGGTCCCTTCAGCAATTTGGAATGATGCGTCAGCCTTGGAGGCCA
CAGAGGGGCCTTCCAGAGACTGCTGTTTCAGTCCTTCGTGCTTGGCTTTTTGAACATTTC
CTCCATCCCTACCCAAAAGATTCCGAGAAAATCATGCTGGCGAGGCAAACAGGTTTAACC
AGAAGTCAGGTGGCAAACTGGTTCATAAATGCTCGAGTGCGTCTTTGGAAGCCCATGATT
GAAGATATGTACAAGGAAGAGTTTGGTGTGGCAGAAGCAGGTTCCGGAGTTTCACCAGAA
CGAGTACCGGTAGACTCCAAAGAGAAGTCAATAGCTGAAAACACAGGAGAAGAGATTCCG
GAAAGCTTTACTACTCCAGCTGCTAACTGCAGTCATCTCGATCCATCTGACGAGTCACGT
AATAATGTTACTAATGTACACAACAATTCATTTACAACCAAATTTAGCTTCCAAGACGGT
GTTTATGAACATGAGAGGATTGATTGTGGATCAAGTAAGTTGCAGAGCGAACAAATTCCT
ATTGCTCACGGCTTTGGTCCTAAACCGACTAGTGATGGAAGCATCATTGGTGCTGTCAAT
ACATACCATCCTTCCATGTTTGGTGACATAATGGGCAATCAAGTATCACTCGCTCTGCGT
CTGCAAAACAGTCAAATGGACCAGCAGCCAATGTCTGGTAGGCCACAGTTAAGACAGGAC
GAGAAGACGGATTCTACTCATATGGACATTGGTAAAGGTGAGTACTACTATATCGATCCA
GTAAACCAGCAAGAAAGGTTCTCAGGTCCTCATCTTCTATCCGATTTTGTAGTGTAA