Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009608
CDS Infomation

pacid=37475102 polypeptide=PGSC0003DMP400006693 locus=PGSC0003DMG400003749 ID=PGSC0003DMT400009608.v4.03 annot-version=v4.03
Sequence

ATGAGTTTATGCTTCTGCTCCAATTTGAAACCATCCATTCTCTTCCCGGAGTCCGATTTC
CGATGGGTTCAGACCCGTACCCGACCCGTTTCCTTCACTAAGCTAATCCAAACTAAGTAC
AGTTACCGTGGATGCATTAAAGCAGTCGGAGAAGAAATCGGAGTTCTATCGCCGGACGAC
AGCTTATCGGTGCGAAATCCGGTAATTGAAGAGGAAACAGTTCCGGAAACTGAGGTTAAT
GAAGTAGAAAATGGAGTTGCTAGTGTTGTAGCTGAAGAAAAAGCTCAAACTTGGATAAGT
AAGAGTGAGAACAAGGAAAAATTGGATGAGGAAGATGAAAACGCTAGTAGATTCAAGCTA
CGTAATGGTAGAGAGGTTTTTGAAGAGAAAGCCTACCTAGTGGGTGTTGCGTGCAAAGGT
GATACAGAAGATTCATTTGGTATAGAGGAATCACTCAAGGAATTGGCTCAGCTGGCTGAT
ACTGCTGGACTACTGGTTGTTGATTCTACATATCAGAAGCTATCTTCTCCCAATCCGAGG
ACTTACATAGGATCTGGAAAGGTTTCAGAAATCAAAAGCGCAATTCGTGCATTTGATGTT
GAGACTGTTATATTTGATGATGAACTTTCACCAGGACAATTGCGTAATTTGGAGAAGGCT
TTTGGTGGAGATGTTAGAGTGTGTGATCGCACTGCTCTCATACTGGATATTTTCAACCAG
CGTGCAGCAACCCGTGAAGCATCTTTACAGGTGTCATTGGCACAAATGGAATACCAATTA
CCACGGCTAACCCGTATGTGGACTCACCTTGAGCGTCAAGCTGGAGGGCAGGTCAAGGGT
ATGGGTGAAAAACAGATCGAAGTAGACAAGAGAATTTTACGTACTCAAATTGGTGTACTA
AAAAAAGAGCTAGAATCTGTTCGGAAGCATCGAAAACAATACAGGAACCGTCGTGTATCT
GTACCTGTCCCTGTTGTATCTTTGGTTGGATACACAAATGCCGGAAAAAGTACACTTCTT
AACCAGTTGACTGGGGCTGATGTTCTTGCGGAGGACCGATTATTCGCTACACTTGATCCT
ACTACAAGAAGGGTGCAGATGAAGAATGGGAAGGAGTTTCTGCTTACAGATACAGTTGGC
TTCATCCAAAAATTACCGACAACTCTGGTTGCAGCCTTTAGGGCAACACTTGAAGAAATT
GCTGAGTCTTCAATTTTAGTGCATGTGGCGGACATCAGTCACCCACTCGCAGAGCAACAG
ATAGAAGCTGTGGAGAAAGTTCTTTCAGAACTGGATACATCATCAATTCCAAAGTTGATG
TTGTGGAACAAGGTTGATAAAGCTGAAGATCCAGAGAAAATCAAGTTAGAAGCCAAGACG
AGAAACGATGTGGTTTGCGTTTCTGCTTTAACTGGTGAAGGGTTGGATGAATTCTGCAAT
GAAATCCAGAATAGACTAAAGGATGCAATGGTATGGGTGGAAGCCTTGATCCCATTTGAT
AAAGGGGAACTCCTCAGTACGATACATCAAGTTGGAATGGTTGAGAGAACCGAATACACT
GAGAAAGGAACTCTGGTGAGAGCACATGTTCCCCTCCGATTTGCAAGGCTTCTAACTCCT
ATGAGGCAAATGTGTGTATCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400006693
PEP Infomation

pacid=37475102 transcript=PGSC0003DMT400009608 locus=PGSC0003DMG400003749 ID=PGSC0003DMT400009608.v4.03 annot-version=v4.03
Sequence

MSLCFCSNLKPSILFPESDFRWVQTRTRPVSFTKLIQTKYSYRGCIKAVGEEIGVLSPDD
SLSVRNPVIEEETVPETEVNEVENGVASVVAEEKAQTWISKSENKEKLDEEDENASRFKL
RNGREVFEEKAYLVGVACKGDTEDSFGIEESLKELAQLADTAGLLVVDSTYQKLSSPNPR
TYIGSGKVSEIKSAIRAFDVETVIFDDELSPGQLRNLEKAFGGDVRVCDRTALILDIFNQ
RAATREASLQVSLAQMEYQLPRLTRMWTHLERQAGGQVKGMGEKQIEVDKRILRTQIGVL
KKELESVRKHRKQYRNRRVSVPVPVVSLVGYTNAGKSTLLNQLTGADVLAEDRLFATLDP
TTRRVQMKNGKEFLLTDTVGFIQKLPTTLVAAFRATLEEIAESSILVHVADISHPLAEQQ
IEAVEKVLSELDTSSIPKLMLWNKVDKAEDPEKIKLEAKTRNDVVCVSALTGEGLDEFCN
EIQNRLKDAMVWVEALIPFDKGELLSTIHQVGMVERTEYTEKGTLVRAHVPLRFARLLTP
MRQMCVS*

Transcript Sequence

Transcript ID

PGSC0003DMT400009608
Transcript Infomation

pacid=37475102 locus=PGSC0003DMG400003749 ID=PGSC0003DMT400009608.v4.03 annot-version=v4.03
Sequence

ATGAGTTTATGCTTCTGCTCCAATTTGAAACCATCCATTCTCTTCCCGGAGTCCGATTTC
CGATGGGTTCAGACCCGTACCCGACCCGTTTCCTTCACTAAGCTAATCCAAACTAAGTAC
AGTTACCGTGGATGCATTAAAGCAGTCGGAGAAGAAATCGGAGTTCTATCGCCGGACGAC
AGCTTATCGGTGCGAAATCCGGTAATTGAAGAGGAAACAGTTCCGGAAACTGAGGTTAAT
GAAGTAGAAAATGGAGTTGCTAGTGTTGTAGCTGAAGAAAAAGCTCAAACTTGGATAAGT
AAGAGTGAGAACAAGGAAAAATTGGATGAGGAAGATGAAAACGCTAGTAGATTCAAGCTA
CGTAATGGTAGAGAGGTTTTTGAAGAGAAAGCCTACCTAGTGGGTGTTGCGTGCAAAGGT
GATACAGAAGATTCATTTGGTATAGAGGAATCACTCAAGGAATTGGCTCAGCTGGCTGAT
ACTGCTGGACTACTGGTTGTTGATTCTACATATCAGAAGCTATCTTCTCCCAATCCGAGG
ACTTACATAGGATCTGGAAAGGTTTCAGAAATCAAAAGCGCAATTCGTGCATTTGATGTT
GAGACTGTTATATTTGATGATGAACTTTCACCAGGACAATTGCGTAATTTGGAGAAGGCT
TTTGGTGGAGATGTTAGAGTGTGTGATCGCACTGCTCTCATACTGGATATTTTCAACCAG
CGTGCAGCAACCCGTGAAGCATCTTTACAGGTGTCATTGGCACAAATGGAATACCAATTA
CCACGGCTAACCCGTATGTGGACTCACCTTGAGCGTCAAGCTGGAGGGCAGGTCAAGGGT
ATGGGTGAAAAACAGATCGAAGTAGACAAGAGAATTTTACGTACTCAAATTGGTGTACTA
AAAAAAGAGCTAGAATCTGTTCGGAAGCATCGAAAACAATACAGGAACCGTCGTGTATCT
GTACCTGTCCCTGTTGTATCTTTGGTTGGATACACAAATGCCGGAAAAAGTACACTTCTT
AACCAGTTGACTGGGGCTGATGTTCTTGCGGAGGACCGATTATTCGCTACACTTGATCCT
ACTACAAGAAGGGTGCAGATGAAGAATGGGAAGGAGTTTCTGCTTACAGATACAGTTGGC
TTCATCCAAAAATTACCGACAACTCTGGTTGCAGCCTTTAGGGCAACACTTGAAGAAATT
GCTGAGTCTTCAATTTTAGTGCATGTGGCGGACATCAGTCACCCACTCGCAGAGCAACAG
ATAGAAGCTGTGGAGAAAGTTCTTTCAGAACTGGATACATCATCAATTCCAAAGTTGATG
TTGTGGAACAAGGTTGATAAAGCTGAAGATCCAGAGAAAATCAAGTTAGAAGCCAAGACG
AGAAACGATGTGGTTTGCGTTTCTGCTTTAACTGGTGAAGGGTTGGATGAATTCTGCAAT
GAAATCCAGAATAGACTAAAGGATGCAATGGTATGGGTGGAAGCCTTGATCCCATTTGAT
AAAGGGGAACTCCTCAGTACGATACATCAAGTTGGAATGGTTGAGAGAACCGAATACACT
GAGAAAGGAACTCTGGTGAGAGCACATGTTCCCCTCCGATTTGCAAGGCTTCTAACTCCT
ATGAGGCAAATGTGTGTATCATAA