Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009604
CDS Infomation

pacid=37474784 polypeptide=PGSC0003DMP400006689 locus=PGSC0003DMG400003746 ID=PGSC0003DMT400009604.v4.03 annot-version=v4.03
Sequence

ATGGAGCCTGCAAATCTCCATCAACAATATCAATATCATCAACTCCAATTCCAAGATCAA
TTTCCTCTTATTGGTATTTCTCCAAATTCTTCTTCATCTTCTAATAATTCTTGCTATGGA
GGAGTTTCAACAACAAACACTTGGACCCCATGTACTACTACTACTACTACTATCTTGAAC
AGTCATGGAAGTGGTCTTATTAATTCATATTCTAGTGGAGACATCATCAATACTACAAAT
TCATCATCAAGTGATCCATTAAACCTAGTTAATTCTATGAGTAGTACTACTCAAGATTTG
GGATTTCATCAATGGGCTAATAATAACATTAAGCACGAAAATTCATATCCAAAATTTACT
CAAATGTTGACAAGTCCATCAAGTATAGAAGAAGGAGGAGAATTGAGTGATATGAATGCT
AAGCTTTTGCTTGGTACACTTTCTAATACTGGGCTTCAACTTTATCATGGAGATAATAAT
AATAATAATAATAACAATAATCTTCTCTATTCTTCAAATTCTAGTAGTATTAGTACTAAT
AGAGGGAGATTTAGTCAAATATATCCCACAATAAATGTGTCCAATTTGAATATAAATCAT
CAAGCAAATTCTTGTAGCTCTTTGGATATGAATTTACAGCCATTGGATCTCATCAATTCT
ACAAGATATGGAGGGAGTTTTAGCCAAACCTATGGCTTAACAACAAATCATTTTCAGCAT
TCATCAAGTGAAAGTCCAGTAAATAGCTCCACAAGTATATCAGCCTTTAGTAATGGAATG
CCTGAAGCTAAAAGGACCAGCAATACTTTGGAGACTAATAAAGGGCCTCAAAATGCACCA
AAAAAATCAAGAGTTGATTCACGCGCATCATGTCCACCCTTTAAGGTGAGAAAGGAGAAA
TTAGGAGATAGAATAGCAGCTCTTCAACAATTGGTAGCACCTTTTGGCAAGACGGACACA
GCATCTGTACTAATGGAAGCTATTGGTTATATCAAATTTCTTCAAAACCAAGTTGAGACA
CTAAGTGTGCCATACATGAAATCATCACGAAGCAAAGCCAGCAGATCATTGCATGGAGGT
GGTGGAGAGATGAATAATGAAGAAATGAAAAGAGATCTTAGAAGCAGAGGTTTGTGTTTA
GTGCCTTTGACATGTTTAACTTATGTTACTGAAGGTGGAGGAGGTGTTTGGCCACCCCCT
AATTTTACTGGAGGCACTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400006689
PEP Infomation

pacid=37474784 transcript=PGSC0003DMT400009604 locus=PGSC0003DMG400003746 ID=PGSC0003DMT400009604.v4.03 annot-version=v4.03
Sequence

MEPANLHQQYQYHQLQFQDQFPLIGISPNSSSSSNNSCYGGVSTTNTWTPCTTTTTTILN
SHGSGLINSYSSGDIINTTNSSSSDPLNLVNSMSSTTQDLGFHQWANNNIKHENSYPKFT
QMLTSPSSIEEGGELSDMNAKLLLGTLSNTGLQLYHGDNNNNNNNNNLLYSSNSSSISTN
RGRFSQIYPTINVSNLNINHQANSCSSLDMNLQPLDLINSTRYGGSFSQTYGLTTNHFQH
SSSESPVNSSTSISAFSNGMPEAKRTSNTLETNKGPQNAPKKSRVDSRASCPPFKVRKEK
LGDRIAALQQLVAPFGKTDTASVLMEAIGYIKFLQNQVETLSVPYMKSSRSKASRSLHGG
GGEMNNEEMKRDLRSRGLCLVPLTCLTYVTEGGGGVWPPPNFTGGT*

Transcript Sequence

Transcript ID

PGSC0003DMT400009604
Transcript Infomation

pacid=37474784 locus=PGSC0003DMG400003746 ID=PGSC0003DMT400009604.v4.03 annot-version=v4.03
Sequence

ATGGAGCCTGCAAATCTCCATCAACAATATCAATATCATCAACTCCAATTCCAAGATCAA
TTTCCTCTTATTGGTATTTCTCCAAATTCTTCTTCATCTTCTAATAATTCTTGCTATGGA
GGAGTTTCAACAACAAACACTTGGACCCCATGTACTACTACTACTACTACTATCTTGAAC
AGTCATGGAAGTGGTCTTATTAATTCATATTCTAGTGGAGACATCATCAATACTACAAAT
TCATCATCAAGTGATCCATTAAACCTAGTTAATTCTATGAGTAGTACTACTCAAGATTTG
GGATTTCATCAATGGGCTAATAATAACATTAAGCACGAAAATTCATATCCAAAATTTACT
CAAATGTTGACAAGTCCATCAAGTATAGAAGAAGGAGGAGAATTGAGTGATATGAATGCT
AAGCTTTTGCTTGGTACACTTTCTAATACTGGGCTTCAACTTTATCATGGAGATAATAAT
AATAATAATAATAACAATAATCTTCTCTATTCTTCAAATTCTAGTAGTATTAGTACTAAT
AGAGGGAGATTTAGTCAAATATATCCCACAATAAATGTGTCCAATTTGAATATAAATCAT
CAAGCAAATTCTTGTAGCTCTTTGGATATGAATTTACAGCCATTGGATCTCATCAATTCT
ACAAGATATGGAGGGAGTTTTAGCCAAACCTATGGCTTAACAACAAATCATTTTCAGCAT
TCATCAAGTGAAAGTCCAGTAAATAGCTCCACAAGTATATCAGCCTTTAGTAATGGAATG
CCTGAAGCTAAAAGGACCAGCAATACTTTGGAGACTAATAAAGGGCCTCAAAATGCACCA
AAAAAATCAAGAGTTGATTCACGCGCATCATGTCCACCCTTTAAGGTGAGAAAGGAGAAA
TTAGGAGATAGAATAGCAGCTCTTCAACAATTGGTAGCACCTTTTGGCAAGACGGACACA
GCATCTGTACTAATGGAAGCTATTGGTTATATCAAATTTCTTCAAAACCAAGTTGAGACA
CTAAGTGTGCCATACATGAAATCATCACGAAGCAAAGCCAGCAGATCATTGCATGGAGGT
GGTGGAGAGATGAATAATGAAGAAATGAAAAGAGATCTTAGAAGCAGAGGTTTGTGTTTA
GTGCCTTTGACATGTTTAACTTATGTTACTGAAGGTGGAGGAGGTGTTTGGCCACCCCCT
AATTTTACTGGAGGCACTTAA