Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009562
CDS Infomation

pacid=37474361 polypeptide=PGSC0003DMP400006656 locus=PGSC0003DMG401003730 ID=PGSC0003DMT400009562.v4.03 annot-version=v4.03
Sequence

ATGAGGAAGCACAACACAGCTTTAACAAGATTTGGGAGAAAGGTAAAAGGTTCATATCAA
TCTTATGGTCTTGGTGTTAAGTTAGCTGCAGTAGTAATTTTGGGTCTTTGTTTTGTATTC
ATTTGGTCTGTGTTTTCACCTTCTTCTTATTCAGTAGCCTATCAAAGGGACACTTTTGAT
GATATTAGAGAACCTATTTCATCTGCAAATAGGAAAAAGGTTACATCTTTGGTTCCTTCA
ACCAAGAAAGAACAACCCCATAATAAGAAATTGAAACATAGATCAAGTTCTGGTGAGAAA
AAGAAAAGGGTTGATAGGTCTTCTTTGCCTTCAAAATCTGGTGGTTGGCATAAGAATGAT
AAAAGTGGAGTTGATAGGAAGAGAAAGGGTGAGGATCTGAAGTTACCAAAAAAGGCTGAT
GAGGTAAAGGAACAAGAATTGGAAGGATCTGAAACTGATGTGTTGGAGAAGGAGAATGAG
GAAGAGAAAATAGGAAATGATAAGCAAGAAGAAGAGAAAAAAGTAGTTGAAGTTAAAGAG
AATGAGAAAGAAAAAACAGAAAATAATAGTAAACAAGAAGGAGAAGGAGTGGATGGTAAA
GAGACTGAGAAAGAGGAAATAGAAAGTAATAAAGAAGAAGAAGGAGAAGGAGAAGGAACA
GTAGATGGTAATGAAGGTAATGGTGAATTAGCTAATACTGAGGAGTTGGATCAAGAGTCT
GCTGAGAAAGTGGAGGATGAGGATGAGGATGAGAAAGCTAAAGATAATGGGAAGAAGGAT
AAGAATTTAGGTCCATTATTTGATCCAAAAGCACATTATACTTGGAATTTATGTAGCACT
AGAAGCAAGCACAATTACATTCCTTGCATTGACTTTGAAAGTGCCAGTGGAAAGTTGCAG
AATTATCGGCATCACGAAAGAAGTTGTCCTAAAGCACCTCAAATGTGTCTTGTTCCCCTT
CCTCCTGGTGGTTATGAGACTCCAGTAAGCTGGCCTGAGAGTAAGTCAAAGATACTTTAT
AAAAATGTGGCACACCTGAAACTAGAGGCATTTGTTAAGAAAGGGAGCTGGGTGGTGGAG
TCTGGAGATTATCTCGCTTTTCCGACGAACCAATCTATACCCAAAGGTGGAATTCAACAC
TACCTAGATTTCATAGAAGAGATGGTACCAGACATTGAATGGGGGAAGAATATCCGTGTT
GTGCTGGATATTGGATGTGAAGATTCAAGCTTCGGGGCTTCTCTACTTGAAAAAGATGTG
TTAACACTTACTCTAGGCTTAAAAGATGACCTTGTGGATCTAGCACAAGTTGCACTTGAG
CGTGGTTTTCCAGCAGTAGTTACCCCATTCGGAACTCGGAGGCTTCCCTTTCCTAGTGGT
GTCTTTGATGCTATTCACTGTAATGATTGCCATGCATCTTGGCATTCTAATGGAGGAAAG
CATCTTATAGAGATGAACAGAATTTTGAGGCCTGGAGGTTATTTTATTTTGTCTTCAAAG
CACAATAGCATTGAAGTTGAAGAAGCTATGTCCACGTTGACAGCATCAATCTGTTGGAAC
ATCCTCGCTGATAAAACTGATGAAATCAGTGATATCAGGATTAAGTTATACCAAAAACCA
CAAGCAAATGACATATACCAATTGAGAAGGAAAAAAGTTCCACCTCTATGCAAAGCAAAT
GAGAACCCAGATGCATCCTGGTATGTGCCGATTAAATCTTGCTTGCACACAATTCCTGAA
TCCATAGAACAACGAGGAACTGAATGGCCTGAGGAGTGGCCAAAGAGACTTGAAACTTAT
CCCGACTGGATGAACAATAGAGAGAAATTGATCGCAGACAGTGAGCACTGGAAAGCTATT
GTTGACCATTCTTATCTAGTTGGCTTGGGTATTGATTGGTCCAACATTCGGAATGTAATG
GATATGAAAGCCATCAATGGAGGATTTGCAGCAGCTCTTGCACAGCAGAAGGTGTGGGTG
ATGAATGTTATTCCTGTACATGCACCAAACACCCTTCCCGTAGTCTTTGAAAGAGGACTT
ATTGGCGTGTACCACGATTGGTGTGAGGCTTTTGGTACTTATCCAAGATCATACGACCTT
CTACATGCAGATCATCTCTTCTCAAGGCTTAAGAACAGGTGCAAGCATCCCATTGTGATT
GTGGTTGAGATGGACCGTATATTACGGCCTGGTGGCTGGGGAATCATACGTGACAAGGTC
GAAATACTTGATCCATTAGAGAAAATATTGAGAAGCTTGCACTGGGAGATACGAATGACT
TTCGCCAAAGATAAGGAAGGCATCCTTTGTGCTCAAAAGACAATGTGGAGACCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400006656
PEP Infomation

pacid=37474361 transcript=PGSC0003DMT400009562 locus=PGSC0003DMG401003730 ID=PGSC0003DMT400009562.v4.03 annot-version=v4.03
Sequence

MRKHNTALTRFGRKVKGSYQSYGLGVKLAAVVILGLCFVFIWSVFSPSSYSVAYQRDTFD
DIREPISSANRKKVTSLVPSTKKEQPHNKKLKHRSSSGEKKKRVDRSSLPSKSGGWHKND
KSGVDRKRKGEDLKLPKKADEVKEQELEGSETDVLEKENEEEKIGNDKQEEEKKVVEVKE
NEKEKTENNSKQEGEGVDGKETEKEEIESNKEEEGEGEGTVDGNEGNGELANTEELDQES
AEKVEDEDEDEKAKDNGKKDKNLGPLFDPKAHYTWNLCSTRSKHNYIPCIDFESASGKLQ
NYRHHERSCPKAPQMCLVPLPPGGYETPVSWPESKSKILYKNVAHLKLEAFVKKGSWVVE
SGDYLAFPTNQSIPKGGIQHYLDFIEEMVPDIEWGKNIRVVLDIGCEDSSFGASLLEKDV
LTLTLGLKDDLVDLAQVALERGFPAVVTPFGTRRLPFPSGVFDAIHCNDCHASWHSNGGK
HLIEMNRILRPGGYFILSSKHNSIEVEEAMSTLTASICWNILADKTDEISDIRIKLYQKP
QANDIYQLRRKKVPPLCKANENPDASWYVPIKSCLHTIPESIEQRGTEWPEEWPKRLETY
PDWMNNREKLIADSEHWKAIVDHSYLVGLGIDWSNIRNVMDMKAINGGFAAALAQQKVWV
MNVIPVHAPNTLPVVFERGLIGVYHDWCEAFGTYPRSYDLLHADHLFSRLKNRCKHPIVI
VVEMDRILRPGGWGIIRDKVEILDPLEKILRSLHWEIRMTFAKDKEGILCAQKTMWRP*

Transcript Sequence

Transcript ID

PGSC0003DMT400009562
Transcript Infomation

pacid=37474361 locus=PGSC0003DMG401003730 ID=PGSC0003DMT400009562.v4.03 annot-version=v4.03
Sequence

ATGAGGAAGCACAACACAGCTTTAACAAGATTTGGGAGAAAGGTAAAAGGTTCATATCAA
TCTTATGGTCTTGGTGTTAAGTTAGCTGCAGTAGTAATTTTGGGTCTTTGTTTTGTATTC
ATTTGGTCTGTGTTTTCACCTTCTTCTTATTCAGTAGCCTATCAAAGGGACACTTTTGAT
GATATTAGAGAACCTATTTCATCTGCAAATAGGAAAAAGGTTACATCTTTGGTTCCTTCA
ACCAAGAAAGAACAACCCCATAATAAGAAATTGAAACATAGATCAAGTTCTGGTGAGAAA
AAGAAAAGGGTTGATAGGTCTTCTTTGCCTTCAAAATCTGGTGGTTGGCATAAGAATGAT
AAAAGTGGAGTTGATAGGAAGAGAAAGGGTGAGGATCTGAAGTTACCAAAAAAGGCTGAT
GAGGTAAAGGAACAAGAATTGGAAGGATCTGAAACTGATGTGTTGGAGAAGGAGAATGAG
GAAGAGAAAATAGGAAATGATAAGCAAGAAGAAGAGAAAAAAGTAGTTGAAGTTAAAGAG
AATGAGAAAGAAAAAACAGAAAATAATAGTAAACAAGAAGGAGAAGGAGTGGATGGTAAA
GAGACTGAGAAAGAGGAAATAGAAAGTAATAAAGAAGAAGAAGGAGAAGGAGAAGGAACA
GTAGATGGTAATGAAGGTAATGGTGAATTAGCTAATACTGAGGAGTTGGATCAAGAGTCT
GCTGAGAAAGTGGAGGATGAGGATGAGGATGAGAAAGCTAAAGATAATGGGAAGAAGGAT
AAGAATTTAGGTCCATTATTTGATCCAAAAGCACATTATACTTGGAATTTATGTAGCACT
AGAAGCAAGCACAATTACATTCCTTGCATTGACTTTGAAAGTGCCAGTGGAAAGTTGCAG
AATTATCGGCATCACGAAAGAAGTTGTCCTAAAGCACCTCAAATGTGTCTTGTTCCCCTT
CCTCCTGGTGGTTATGAGACTCCAGTAAGCTGGCCTGAGAGTAAGTCAAAGATACTTTAT
AAAAATGTGGCACACCTGAAACTAGAGGCATTTGTTAAGAAAGGGAGCTGGGTGGTGGAG
TCTGGAGATTATCTCGCTTTTCCGACGAACCAATCTATACCCAAAGGTGGAATTCAACAC
TACCTAGATTTCATAGAAGAGATGGTACCAGACATTGAATGGGGGAAGAATATCCGTGTT
GTGCTGGATATTGGATGTGAAGATTCAAGCTTCGGGGCTTCTCTACTTGAAAAAGATGTG
TTAACACTTACTCTAGGCTTAAAAGATGACCTTGTGGATCTAGCACAAGTTGCACTTGAG
CGTGGTTTTCCAGCAGTAGTTACCCCATTCGGAACTCGGAGGCTTCCCTTTCCTAGTGGT
GTCTTTGATGCTATTCACTGTAATGATTGCCATGCATCTTGGCATTCTAATGGAGGAAAG
CATCTTATAGAGATGAACAGAATTTTGAGGCCTGGAGGTTATTTTATTTTGTCTTCAAAG
CACAATAGCATTGAAGTTGAAGAAGCTATGTCCACGTTGACAGCATCAATCTGTTGGAAC
ATCCTCGCTGATAAAACTGATGAAATCAGTGATATCAGGATTAAGTTATACCAAAAACCA
CAAGCAAATGACATATACCAATTGAGAAGGAAAAAAGTTCCACCTCTATGCAAAGCAAAT
GAGAACCCAGATGCATCCTGGTATGTGCCGATTAAATCTTGCTTGCACACAATTCCTGAA
TCCATAGAACAACGAGGAACTGAATGGCCTGAGGAGTGGCCAAAGAGACTTGAAACTTAT
CCCGACTGGATGAACAATAGAGAGAAATTGATCGCAGACAGTGAGCACTGGAAAGCTATT
GTTGACCATTCTTATCTAGTTGGCTTGGGTATTGATTGGTCCAACATTCGGAATGTAATG
GATATGAAAGCCATCAATGGAGGATTTGCAGCAGCTCTTGCACAGCAGAAGGTGTGGGTG
ATGAATGTTATTCCTGTACATGCACCAAACACCCTTCCCGTAGTCTTTGAAAGAGGACTT
ATTGGCGTGTACCACGATTGGTGTGAGGCTTTTGGTACTTATCCAAGATCATACGACCTT
CTACATGCAGATCATCTCTTCTCAAGGCTTAAGAACAGGTGCAAGCATCCCATTGTGATT
GTGGTTGAGATGGACCGTATATTACGGCCTGGTGGCTGGGGAATCATACGTGACAAGGTC
GAAATACTTGATCCATTAGAGAAAATATTGAGAAGCTTGCACTGGGAGATACGAATGACT
TTCGCCAAAGATAAGGAAGGCATCCTTTGTGCTCAAAAGACAATGTGGAGACCTTGA