Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009550
CDS Infomation

pacid=37473425 polypeptide=PGSC0003DMP400006645 locus=PGSC0003DMG400003725 ID=PGSC0003DMT400009550.v4.03 annot-version=v4.03
Sequence

ATGGGAGTTCCGGCATTTTACCGATGGTTAGCTGAGAAGTATCCGATGGTTGTGGTGGAT
GTGGTAGAAGAAGAGGCCGTTGTTATCGAAGATGTAAGAATTCCGGTGGATACGAGCAAA
CCTAATCCCAACAACATCGAGTATGATAACTTGTATCTGGATATGAATGGTATCATTCAT
CCATGTTTTCATCCCGAAGATAGACCCTCTCCTACAACATTTGAGGAGGTCTTTGAGTGC
ATGTTTGATTACATAGACAGGCTTTTCTCTATGGTGCGTCCTCGAAAGCTGCTATATATG
GCTATTGATGGTGTTGCACCAAGGGCAAAAATGAATCAGCAGAGATCTAGACGTTTTAGA
TCAGCAAAAGATTCTGCAGATGCGGCAGCCGAGGAGGAAAAGCTGCGGGAGGAATTCGAG
AGAGAGGGTAGGAAGCTCCCCACAAAGCAAGAGTCACAAGTTTTTGATTCAAATGTCATC
ACTCCCGGAACTCAGTTCATGGCCACATTGTCAATTGCTCTTCAGTACTATGTTCATCTT
AGACTAAACCATGATTCGGGATGGAAAAACATCAAGGTTATACTTTCTGATGCAAATGTT
CCTGGTGAAGGGGAGCATAAAGTTATGTCCTATCTTCGACTCCAAAGAAATCTTCCTGGT
TATGACCCAAATACACGTCATTGTCTCTACGGTTTGGATGCAGATCTAATCATGTTGGCT
TTGGCTACTCACGAAGTTCACTTCTCCATACTCAGAGAGGTTGTATTTACGCCAGGTCAG
CAGGATAAGTGTTTCCTTTGTGGTCAAATGGGTCACTTAGCTGCAGATTGTGAAGGAAAG
GCGAAACGAAAAGCAGGAGAATTCGATGAGAAAGGCAATGCTGAGGTTGTGGCGAAAAAA
CCTTACCAGTTCCTCAACATATGGACTTTGCGGGAGTATTTAGAATTTGATATGAGAATC
CCAAATCCTCCTTTTGAGATTGATTTCGAGCGGATCATCGACGACTTCATATTTATTTGT
TTCTTTGTTGGAAATGATTTTCTCCCACATATGCCTACTCTTGAGATCCGCGAGGGTGCA
ATAAACTTGTTACTGGCTGTCTATAAGAAGGAGTTTAGATCCATGGAAGGTTATTTAACT
GATGGTAGCCAGCCAAATCTTAGCAGAGTAGAACATTTCATTCAGGCCGTGGGATCATAT
GAAGATAAGATATTTCAGAAAAGAGCGCGGTTACATCAGAGACAATCTGAGAGAATTAAG
CGTGAAAAGGCCCAGTTAAAAAGAGGAGATGACTCTGCTCCTCGAGCCGAACCTGAATCT
TTGGTTCCAGTTGCTCGGTTCAGTGGTTCTCGGCTTGCTTCAGGTCCTTCTCCTTCTCCC
TATCAACAAGGGGGAACTGCAAGACGTCCCCAACTTCAGCATGGCACATCAAGTCTTTCC
GTCCTCGACTTTCCGAATGAATACTATGAGCCTGTTGATGATACAAGATCTATTTTTCGC
ACCAAAAAAGCTGCACGTATGAGTTCTGGTGCCACGATAGGAGCTGCAATTGTTGAAGCT
GAGGATAGCCTCGAAACTGAAGTGTTAGAAAACAAAGAAGAACTGAAAACAAAGCTAAAC
AAGTTGATCCGTGAGAAGAATGATGTTTTTAATTCAGAGAATCCCGAGGAAGACAAGATC
AAACTGGGAGTGCCAGGATGGAAAGAAAGGTATTATGAGGAAAAATTTTCTGCAAAGACA
CCTGAGGAGATGGAAGAAATACGAAAGGACATTGTCTTGAAATACACAGAAGGGTTGTGC
TGGGTTATGCACTATTATTATGAAGGTGTTTGTTCCTGGCAGTGGTTTTATCCTTATCAT
TATGCTCCTTTTGCTTCTGACCTCAAGGATCTTGGGGAGTTGAATATTACCTTTGAACTA
GGTTCTCCATTCAAACCATTCAATCAGCTGTTGGGAGTTTTTCCTGCTGCCAGTTCACAT
GCTCTTCCTGAACAGTATAGGCAATTGATGACAGACCCAAACTCTCCCATTAGCGACTTC
TATCCTTCTGATTTTGAGGTGGACATGAATGGGAAGCGCTTTTCATGGCAGGGCATTGCC
AAACTACCTTTCATTGATGAAGCCCGGCTCCTTGCAGAAGTTGCAAAAGTTGAACATACC
TTGACGGAGGAAGAAGCACGAAGAAATTGTGTGATGAATGATATGCTTTTTGTGTCATTA
TCTCACCCTTTGTCTCCATACATATTTTCTCTTGATGATCGCTGTAAGCAGCTTACAGAC
AACGAACGTGTTGAAGTGAAGGAGCGCTTGGACCCAAAAGCAAGTGGTGGCATGAATGGC
TACATATCCCTTTGCATGGGAGATCCATGTCCTCCAATTTTTAGAGCTCCTATGGATGGG
TTGGAAGATATTATGGACAATCAAGTCATATGTGCAATATACAAACTCCCTGATGTCCAT
AAGCACATCACACGGCCACCTAAAGGGGTTATTTTCCCAAAGAAGATGGTGACATTCAGT
GATATAAAACCTGATCCAGTGTTGTGGCATGAGGATTCTGGGAGGAAACCTTGGGAAAAT
GGAAGGAACCACCACCCTGGCGGAAACTCTGGTCGTCACCTTGGAGAGGCAGCACACAGG
CTGGTTTCTAATAGTTTGCAGATTAGGAGTGGCCGTGGGGATAATTTGCATGCTCAACCA
GTACCATATCCTTCTGGTCCTTTTCCTTCCTCTCAAGGATACAACGGTCAGGGACATGTT
CGCCCTAATTTTGATTATTCTGCTCGAGATGACACAGCTGCGCCTTATCAGTATGATCAG
AGTTACCACCCTGCTTATATCCCTACTGCTGTTGATCCATATAGTAGGGCTCCTCCTCTG
TATGAGACGGGTGGCCAACCTGTCCCTCCTAGCAGGGATTATCATAGACATGGACATCAT
GCCGCTGTGACGCAGCAAAATGTTGGATATAGTTATTCTTCTCATGCCAATCGTCCGCAG
CATGTTAGCCAATCGCCAGTACCACCAATTGATCATTTTCACCAGCAAAGTAGATACAGT
AGTTACCCCAATTATCATGAACCTTATGAGCCAGGAAGCTATCACCCACCTTATGAGCCA
GGAAGCTATAACCCACCTTATGAGCCAGGAAGCTATAACCCACAGGATGGTGGATGGGCC
CCACAAGTAAACCAAAATGCTGGTCGGGGTTATGGCAATCCACGTCCCTCCAGCAATCAC
TTCTCGGCTTTAGGAAGAGGAAACGATAGAGGGCCACCATCTTCAGGCTATCGCCGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400006645
PEP Infomation

pacid=37473425 transcript=PGSC0003DMT400009550 locus=PGSC0003DMG400003725 ID=PGSC0003DMT400009550.v4.03 annot-version=v4.03
Sequence

MGVPAFYRWLAEKYPMVVVDVVEEEAVVIEDVRIPVDTSKPNPNNIEYDNLYLDMNGIIH
PCFHPEDRPSPTTFEEVFECMFDYIDRLFSMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
SAKDSADAAAEEEKLREEFEREGRKLPTKQESQVFDSNVITPGTQFMATLSIALQYYVHL
RLNHDSGWKNIKVILSDANVPGEGEHKVMSYLRLQRNLPGYDPNTRHCLYGLDADLIMLA
LATHEVHFSILREVVFTPGQQDKCFLCGQMGHLAADCEGKAKRKAGEFDEKGNAEVVAKK
PYQFLNIWTLREYLEFDMRIPNPPFEIDFERIIDDFIFICFFVGNDFLPHMPTLEIREGA
INLLLAVYKKEFRSMEGYLTDGSQPNLSRVEHFIQAVGSYEDKIFQKRARLHQRQSERIK
REKAQLKRGDDSAPRAEPESLVPVARFSGSRLASGPSPSPYQQGGTARRPQLQHGTSSLS
VLDFPNEYYEPVDDTRSIFRTKKAARMSSGATIGAAIVEAEDSLETEVLENKEELKTKLN
KLIREKNDVFNSENPEEDKIKLGVPGWKERYYEEKFSAKTPEEMEEIRKDIVLKYTEGLC
WVMHYYYEGVCSWQWFYPYHYAPFASDLKDLGELNITFELGSPFKPFNQLLGVFPAASSH
ALPEQYRQLMTDPNSPISDFYPSDFEVDMNGKRFSWQGIAKLPFIDEARLLAEVAKVEHT
LTEEEARRNCVMNDMLFVSLSHPLSPYIFSLDDRCKQLTDNERVEVKERLDPKASGGMNG
YISLCMGDPCPPIFRAPMDGLEDIMDNQVICAIYKLPDVHKHITRPPKGVIFPKKMVTFS
DIKPDPVLWHEDSGRKPWENGRNHHPGGNSGRHLGEAAHRLVSNSLQIRSGRGDNLHAQP
VPYPSGPFPSSQGYNGQGHVRPNFDYSARDDTAAPYQYDQSYHPAYIPTAVDPYSRAPPL
YETGGQPVPPSRDYHRHGHHAAVTQQNVGYSYSSHANRPQHVSQSPVPPIDHFHQQSRYS
SYPNYHEPYEPGSYHPPYEPGSYNPPYEPGSYNPQDGGWAPQVNQNAGRGYGNPRPSSNH
FSALGRGNDRGPPSSGYRR*

Transcript Sequence

Transcript ID

PGSC0003DMT400009550
Transcript Infomation

pacid=37473425 locus=PGSC0003DMG400003725 ID=PGSC0003DMT400009550.v4.03 annot-version=v4.03
Sequence

ATGGGAGTTCCGGCATTTTACCGATGGTTAGCTGAGAAGTATCCGATGGTTGTGGTGGAT
GTGGTAGAAGAAGAGGCCGTTGTTATCGAAGATGTAAGAATTCCGGTGGATACGAGCAAA
CCTAATCCCAACAACATCGAGTATGATAACTTGTATCTGGATATGAATGGTATCATTCAT
CCATGTTTTCATCCCGAAGATAGACCCTCTCCTACAACATTTGAGGAGGTCTTTGAGTGC
ATGTTTGATTACATAGACAGGCTTTTCTCTATGGTGCGTCCTCGAAAGCTGCTATATATG
GCTATTGATGGTGTTGCACCAAGGGCAAAAATGAATCAGCAGAGATCTAGACGTTTTAGA
TCAGCAAAAGATTCTGCAGATGCGGCAGCCGAGGAGGAAAAGCTGCGGGAGGAATTCGAG
AGAGAGGGTAGGAAGCTCCCCACAAAGCAAGAGTCACAAGTTTTTGATTCAAATGTCATC
ACTCCCGGAACTCAGTTCATGGCCACATTGTCAATTGCTCTTCAGTACTATGTTCATCTT
AGACTAAACCATGATTCGGGATGGAAAAACATCAAGGTTATACTTTCTGATGCAAATGTT
CCTGGTGAAGGGGAGCATAAAGTTATGTCCTATCTTCGACTCCAAAGAAATCTTCCTGGT
TATGACCCAAATACACGTCATTGTCTCTACGGTTTGGATGCAGATCTAATCATGTTGGCT
TTGGCTACTCACGAAGTTCACTTCTCCATACTCAGAGAGGTTGTATTTACGCCAGGTCAG
CAGGATAAGTGTTTCCTTTGTGGTCAAATGGGTCACTTAGCTGCAGATTGTGAAGGAAAG
GCGAAACGAAAAGCAGGAGAATTCGATGAGAAAGGCAATGCTGAGGTTGTGGCGAAAAAA
CCTTACCAGTTCCTCAACATATGGACTTTGCGGGAGTATTTAGAATTTGATATGAGAATC
CCAAATCCTCCTTTTGAGATTGATTTCGAGCGGATCATCGACGACTTCATATTTATTTGT
TTCTTTGTTGGAAATGATTTTCTCCCACATATGCCTACTCTTGAGATCCGCGAGGGTGCA
ATAAACTTGTTACTGGCTGTCTATAAGAAGGAGTTTAGATCCATGGAAGGTTATTTAACT
GATGGTAGCCAGCCAAATCTTAGCAGAGTAGAACATTTCATTCAGGCCGTGGGATCATAT
GAAGATAAGATATTTCAGAAAAGAGCGCGGTTACATCAGAGACAATCTGAGAGAATTAAG
CGTGAAAAGGCCCAGTTAAAAAGAGGAGATGACTCTGCTCCTCGAGCCGAACCTGAATCT
TTGGTTCCAGTTGCTCGGTTCAGTGGTTCTCGGCTTGCTTCAGGTCCTTCTCCTTCTCCC
TATCAACAAGGGGGAACTGCAAGACGTCCCCAACTTCAGCATGGCACATCAAGTCTTTCC
GTCCTCGACTTTCCGAATGAATACTATGAGCCTGTTGATGATACAAGATCTATTTTTCGC
ACCAAAAAAGCTGCACGTATGAGTTCTGGTGCCACGATAGGAGCTGCAATTGTTGAAGCT
GAGGATAGCCTCGAAACTGAAGTGTTAGAAAACAAAGAAGAACTGAAAACAAAGCTAAAC
AAGTTGATCCGTGAGAAGAATGATGTTTTTAATTCAGAGAATCCCGAGGAAGACAAGATC
AAACTGGGAGTGCCAGGATGGAAAGAAAGGTATTATGAGGAAAAATTTTCTGCAAAGACA
CCTGAGGAGATGGAAGAAATACGAAAGGACATTGTCTTGAAATACACAGAAGGGTTGTGC
TGGGTTATGCACTATTATTATGAAGGTGTTTGTTCCTGGCAGTGGTTTTATCCTTATCAT
TATGCTCCTTTTGCTTCTGACCTCAAGGATCTTGGGGAGTTGAATATTACCTTTGAACTA
GGTTCTCCATTCAAACCATTCAATCAGCTGTTGGGAGTTTTTCCTGCTGCCAGTTCACAT
GCTCTTCCTGAACAGTATAGGCAATTGATGACAGACCCAAACTCTCCCATTAGCGACTTC
TATCCTTCTGATTTTGAGGTGGACATGAATGGGAAGCGCTTTTCATGGCAGGGCATTGCC
AAACTACCTTTCATTGATGAAGCCCGGCTCCTTGCAGAAGTTGCAAAAGTTGAACATACC
TTGACGGAGGAAGAAGCACGAAGAAATTGTGTGATGAATGATATGCTTTTTGTGTCATTA
TCTCACCCTTTGTCTCCATACATATTTTCTCTTGATGATCGCTGTAAGCAGCTTACAGAC
AACGAACGTGTTGAAGTGAAGGAGCGCTTGGACCCAAAAGCAAGTGGTGGCATGAATGGC
TACATATCCCTTTGCATGGGAGATCCATGTCCTCCAATTTTTAGAGCTCCTATGGATGGG
TTGGAAGATATTATGGACAATCAAGTCATATGTGCAATATACAAACTCCCTGATGTCCAT
AAGCACATCACACGGCCACCTAAAGGGGTTATTTTCCCAAAGAAGATGGTGACATTCAGT
GATATAAAACCTGATCCAGTGTTGTGGCATGAGGATTCTGGGAGGAAACCTTGGGAAAAT
GGAAGGAACCACCACCCTGGCGGAAACTCTGGTCGTCACCTTGGAGAGGCAGCACACAGG
CTGGTTTCTAATAGTTTGCAGATTAGGAGTGGCCGTGGGGATAATTTGCATGCTCAACCA
GTACCATATCCTTCTGGTCCTTTTCCTTCCTCTCAAGGATACAACGGTCAGGGACATGTT
CGCCCTAATTTTGATTATTCTGCTCGAGATGACACAGCTGCGCCTTATCAGTATGATCAG
AGTTACCACCCTGCTTATATCCCTACTGCTGTTGATCCATATAGTAGGGCTCCTCCTCTG
TATGAGACGGGTGGCCAACCTGTCCCTCCTAGCAGGGATTATCATAGACATGGACATCAT
GCCGCTGTGACGCAGCAAAATGTTGGATATAGTTATTCTTCTCATGCCAATCGTCCGCAG
CATGTTAGCCAATCGCCAGTACCACCAATTGATCATTTTCACCAGCAAAGTAGATACAGT
AGTTACCCCAATTATCATGAACCTTATGAGCCAGGAAGCTATCACCCACCTTATGAGCCA
GGAAGCTATAACCCACCTTATGAGCCAGGAAGCTATAACCCACAGGATGGTGGATGGGCC
CCACAAGTAAACCAAAATGCTGGTCGGGGTTATGGCAATCCACGTCCCTCCAGCAATCAC
TTCTCGGCTTTAGGAAGAGGAAACGATAGAGGGCCACCATCTTCAGGCTATCGCCGTTAG