Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009549
CDS Infomation

pacid=37475918 polypeptide=PGSC0003DMP400006644 locus=PGSC0003DMG400003724 ID=PGSC0003DMT400009549.v4.03 annot-version=v4.03
Sequence

ATGGATCGGAGGAGTTGGCCCTGGAAGAAGAAATCATCAGATAAGACAGCAAGTGAGAAA
CCTGTAGCTCTTACAGTGGAATCAGCATCTGCCCCTTCAGATTCAACTGAATCTAAGGTT
GAACAGAGTAAACAGGAAATCAAGAAACCGAAGTATGTGCAGATTTCTGTTGAATCTTAT
TCACATTTGACTGGACTGGAGGATCAAGTTAAGTCTCTCGAGGAACAAGTGAATGGCTTA
GAGGATGAAGTCAAGGATTTGAATGAAAAGTTGTCTGCTGCGCAGTCAGAAATGACTAAT
AAGGAGAACCTGGTGAAACAGCACGCTAAAGTTGCTGAAGAAGCTGTCTCAGGTTGGGAG
AAGGCTGAGTCAGAAGCCGCAACACTGAAAAATCACCTGGAGTCCGTCACTCTTTTGAAG
CTTACTGCCGAAGACAGGGCATCACATTTGGATGGTGCACTGAAGGAGTGCATGCGGCAG
ATACGTAATTTGAAAGAAGAGCATGAACAGAAACTGCATGATGTGATTCAGAATAAAGCC
AAACAGTTTGACAAAATGAGGCATGAGTTTGAAGCAAAGATGGCTAACTTGGACCAACAG
TTACTCAGGTCTGCAGCAGAAAATTCTGCACTCTCAAGGTCTTTGCAGGAGCGTTCTAGC
ATGGTGATACAGCTCAGTGAAGAAAAATCCCAAGCTGAAGCAGAAATAGAGATGTTGAAG
AGCAATATCGAGTCATGTGAAAGGGAGATAAATTCTCTGAAATATGAACTCCATATTAAC
TCAAAGGAACTAGAAATTCGTAATGAGGAGAAAAATATGAGTGTACGGTCTGCCGAAGTT
GCAAATAAACAACACCTGGAGGGAGTGAAGAAAATTGCAAAATTGGAAGCAGAGTGTCAG
AGATTACGTGGTCTTGTCCGGAAGAAGTTGCCTGGGCCTGCAGCCTTGGCCCAAATGAAG
CTTGAGGTTGAGAGTTTGGGTAGAGATTACGGGGACAGCCGTGTAAAGAAATCCCAAGGA
AGGCCTTCTAGTCCACAGTTTTCCAGTTTGCCAGATTTTTCATTTGATAGTGTGCAGAAG
TTCCATAAAGAGAATGAGCAATTAACGGAACGCCTTTTGGCAATGGAGGAGGAAACAAAG
ATGTTGAAAGAAGCTTTGGCACACCGGAACAGTGAATTACAAGCGTCTAGGAGTATTTGT
GCAAAGACGTCCAGCAAGCTTCAGAGTTTGGAAGCACAGCTGCAAGCAAATGTTGAACAG
AAAAGCCCACAAAAGTCCACCATTCGACGACAGCCGTCTGAGGGTTCCCTTAGCCATGAA
GCAAATCATCTTCCAAGATTGGCTTCCATGTCTGAAGATGGAAATGACGATAATGTTAGT
TGTGCTAGCTCTTGGACGACAGCATTAATGTCTGATCTCACCCATGTCAAAAAGGAAAAG
AACTTTGACAGTCCACATAAATCTGAAAGTGCAAGCCACCTGGATCTCATGGATGACTTT
TTGGAGATGGAGAAATTAGCTTATCAGTCCAGTGACACAAATGGAGCAGTTTCAAGTCCA
GATATTCCAAATAATGCAAGACCCGAAACTACAAAAGTTGACACCTCCATGCATGTCACC
ACAAGCCCAGATTCTCAGCTGAAAGAACATAATGAGACAAGTGTATCAGGAGATCAAGCA
TCTCGCAACGAGGAAGTATCATCACAAAGTCATCAACCTCTTTCAGATACATCCATATCC
ATGAAGCTCCAATCAAGAATTTCAACTGTTTTGGAGTCTTTGTCAAAGGATGCTGACATT
CAAAGAATTCAAGAGGATCTCAGAGAGATTGTGCAGGAAATGCGCAACGCCTTGATACCG
CAATCAACTAAGAGCATTGTTGAGATAACTCTTTCCTCGAATACTGCTACTGAATCTCAG
CCCTCTCTTGATGATGGCGAGGCAAACTTAGAAAAGGAAATTCCTGTCTCAGAAGATAGT
AAGTCATGCAATGAGTCTATCCATGGTATTAGCAAAGAATTAGCAGATGCTATGTCTCAA
ATTCATGACTTTGTACTCTTTCTGGGCAAAGAAGCAAAGGCTATCCAGGGAACAGCTCCT
GATGGAAGTGGAATCAATGAAAAATTAGATGATTTTTCGGCCACTTATGTTGAGGTAATA
AGCAACAAGTTGAGTATGGTGAATTTTGTCCTTGATCTCTCCCATGTGCTGAGTAATGCG
AGCCAACTACACTTCAATATACTTGGTTACAAGAATTCTGAAACAGAAATAAGTACTTCT
GATTGCATAGACAAGGTTGCTTTACCAGAAAATAAAGATCTTCAGCACTCAGGAGAGGTA
TATGCAAATGGTTGCGCTCATTTTTCTGATTCTACTTCTGATCCAGACATTCCTCATGAA
GGAAGTCTTGTTCCTACTTCAGAGTCAACATCAACCTCTTTGAAGTGCTCGTTGGAGGAG
GTTGAACAATTGAAATTAGAGAAAGAAAATATGGCTCTTGATCTTGCTAGATACTCTGAG
AACCTGGAGAGCACTAAATCCCAGTTGACTGAAACTGAGCAACTTCTTGCAGAGGTTAAG
TCACAATTGGTATCTGCTCAAAAGGCAAACAGTTTGGCTGAAACTCAGCTCAAATGCATG
GCAGAGTCATATAACTCACTTGAAACACGGACTGAGGAGTTGCAAACTGAAGTCAACCGT
CTTCAGGCCAAGATAGAAAATCTTGATAATGAGCTTCAAGAGGAAAAGAAGAATCACCAG
GATACTTTAGCTAGTTGCAAGGATCTCGAAGAGCAACTACAAAGGATGGAGAGTGCTGCT
GATCTTGATGCCAAGACTAACCAGGAGAAAGACTTAACAGCTGCAGCAGAGAAGCTAGCT
GAGTGTCAAGAAACCATATTTCTTCTCGGGAAACAGTTGAACTCTTTGCGTCCTCAGACG
GAGTTTATGGGGTCTCCATACATCGATAGAAGTTCAAAAGGGGAGGGCTTTCGGGAAGAA
TCCACAACCACTAGCATGAACATCCATGACAATGATCTAGCTGAGATGGACAGCGCCAGT
TCCGTAAAAGCAACTTGTGAGTCCCCTGTGGATATATATAATGTGTCATACAGTCCCTCG
GACACTGAAGTAAACAATCCATTGAGATCACCAATCAGCTTAAAGTCTCCTAAACACCGG
TCTACTAAGTCTGGCTCTTCGTCATCTGCTGGCCCTACACCTGAAAAACAATCTCGTGGT
TTCAGCCGATTCTTTTCTTCTAAGGGAAAGACCGGATCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400006644
PEP Infomation

pacid=37475918 transcript=PGSC0003DMT400009549 locus=PGSC0003DMG400003724 ID=PGSC0003DMT400009549.v4.03 annot-version=v4.03
Sequence

MDRRSWPWKKKSSDKTASEKPVALTVESASAPSDSTESKVEQSKQEIKKPKYVQISVESY
SHLTGLEDQVKSLEEQVNGLEDEVKDLNEKLSAAQSEMTNKENLVKQHAKVAEEAVSGWE
KAESEAATLKNHLESVTLLKLTAEDRASHLDGALKECMRQIRNLKEEHEQKLHDVIQNKA
KQFDKMRHEFEAKMANLDQQLLRSAAENSALSRSLQERSSMVIQLSEEKSQAEAEIEMLK
SNIESCEREINSLKYELHINSKELEIRNEEKNMSVRSAEVANKQHLEGVKKIAKLEAECQ
RLRGLVRKKLPGPAALAQMKLEVESLGRDYGDSRVKKSQGRPSSPQFSSLPDFSFDSVQK
FHKENEQLTERLLAMEEETKMLKEALAHRNSELQASRSICAKTSSKLQSLEAQLQANVEQ
KSPQKSTIRRQPSEGSLSHEANHLPRLASMSEDGNDDNVSCASSWTTALMSDLTHVKKEK
NFDSPHKSESASHLDLMDDFLEMEKLAYQSSDTNGAVSSPDIPNNARPETTKVDTSMHVT
TSPDSQLKEHNETSVSGDQASRNEEVSSQSHQPLSDTSISMKLQSRISTVLESLSKDADI
QRIQEDLREIVQEMRNALIPQSTKSIVEITLSSNTATESQPSLDDGEANLEKEIPVSEDS
KSCNESIHGISKELADAMSQIHDFVLFLGKEAKAIQGTAPDGSGINEKLDDFSATYVEVI
SNKLSMVNFVLDLSHVLSNASQLHFNILGYKNSETEISTSDCIDKVALPENKDLQHSGEV
YANGCAHFSDSTSDPDIPHEGSLVPTSESTSTSLKCSLEEVEQLKLEKENMALDLARYSE
NLESTKSQLTETEQLLAEVKSQLVSAQKANSLAETQLKCMAESYNSLETRTEELQTEVNR
LQAKIENLDNELQEEKKNHQDTLASCKDLEEQLQRMESAADLDAKTNQEKDLTAAAEKLA
ECQETIFLLGKQLNSLRPQTEFMGSPYIDRSSKGEGFREESTTTSMNIHDNDLAEMDSAS
SVKATCESPVDIYNVSYSPSDTEVNNPLRSPISLKSPKHRSTKSGSSSSAGPTPEKQSRG
FSRFFSSKGKTGS*

Transcript Sequence

Transcript ID

PGSC0003DMT400009549
Transcript Infomation

pacid=37475918 locus=PGSC0003DMG400003724 ID=PGSC0003DMT400009549.v4.03 annot-version=v4.03
Sequence

ATGGATCGGAGGAGTTGGCCCTGGAAGAAGAAATCATCAGATAAGACAGCAAGTGAGAAA
CCTGTAGCTCTTACAGTGGAATCAGCATCTGCCCCTTCAGATTCAACTGAATCTAAGGTT
GAACAGAGTAAACAGGAAATCAAGAAACCGAAGTATGTGCAGATTTCTGTTGAATCTTAT
TCACATTTGACTGGACTGGAGGATCAAGTTAAGTCTCTCGAGGAACAAGTGAATGGCTTA
GAGGATGAAGTCAAGGATTTGAATGAAAAGTTGTCTGCTGCGCAGTCAGAAATGACTAAT
AAGGAGAACCTGGTGAAACAGCACGCTAAAGTTGCTGAAGAAGCTGTCTCAGGTTGGGAG
AAGGCTGAGTCAGAAGCCGCAACACTGAAAAATCACCTGGAGTCCGTCACTCTTTTGAAG
CTTACTGCCGAAGACAGGGCATCACATTTGGATGGTGCACTGAAGGAGTGCATGCGGCAG
ATACGTAATTTGAAAGAAGAGCATGAACAGAAACTGCATGATGTGATTCAGAATAAAGCC
AAACAGTTTGACAAAATGAGGCATGAGTTTGAAGCAAAGATGGCTAACTTGGACCAACAG
TTACTCAGGTCTGCAGCAGAAAATTCTGCACTCTCAAGGTCTTTGCAGGAGCGTTCTAGC
ATGGTGATACAGCTCAGTGAAGAAAAATCCCAAGCTGAAGCAGAAATAGAGATGTTGAAG
AGCAATATCGAGTCATGTGAAAGGGAGATAAATTCTCTGAAATATGAACTCCATATTAAC
TCAAAGGAACTAGAAATTCGTAATGAGGAGAAAAATATGAGTGTACGGTCTGCCGAAGTT
GCAAATAAACAACACCTGGAGGGAGTGAAGAAAATTGCAAAATTGGAAGCAGAGTGTCAG
AGATTACGTGGTCTTGTCCGGAAGAAGTTGCCTGGGCCTGCAGCCTTGGCCCAAATGAAG
CTTGAGGTTGAGAGTTTGGGTAGAGATTACGGGGACAGCCGTGTAAAGAAATCCCAAGGA
AGGCCTTCTAGTCCACAGTTTTCCAGTTTGCCAGATTTTTCATTTGATAGTGTGCAGAAG
TTCCATAAAGAGAATGAGCAATTAACGGAACGCCTTTTGGCAATGGAGGAGGAAACAAAG
ATGTTGAAAGAAGCTTTGGCACACCGGAACAGTGAATTACAAGCGTCTAGGAGTATTTGT
GCAAAGACGTCCAGCAAGCTTCAGAGTTTGGAAGCACAGCTGCAAGCAAATGTTGAACAG
AAAAGCCCACAAAAGTCCACCATTCGACGACAGCCGTCTGAGGGTTCCCTTAGCCATGAA
GCAAATCATCTTCCAAGATTGGCTTCCATGTCTGAAGATGGAAATGACGATAATGTTAGT
TGTGCTAGCTCTTGGACGACAGCATTAATGTCTGATCTCACCCATGTCAAAAAGGAAAAG
AACTTTGACAGTCCACATAAATCTGAAAGTGCAAGCCACCTGGATCTCATGGATGACTTT
TTGGAGATGGAGAAATTAGCTTATCAGTCCAGTGACACAAATGGAGCAGTTTCAAGTCCA
GATATTCCAAATAATGCAAGACCCGAAACTACAAAAGTTGACACCTCCATGCATGTCACC
ACAAGCCCAGATTCTCAGCTGAAAGAACATAATGAGACAAGTGTATCAGGAGATCAAGCA
TCTCGCAACGAGGAAGTATCATCACAAAGTCATCAACCTCTTTCAGATACATCCATATCC
ATGAAGCTCCAATCAAGAATTTCAACTGTTTTGGAGTCTTTGTCAAAGGATGCTGACATT
CAAAGAATTCAAGAGGATCTCAGAGAGATTGTGCAGGAAATGCGCAACGCCTTGATACCG
CAATCAACTAAGAGCATTGTTGAGATAACTCTTTCCTCGAATACTGCTACTGAATCTCAG
CCCTCTCTTGATGATGGCGAGGCAAACTTAGAAAAGGAAATTCCTGTCTCAGAAGATAGT
AAGTCATGCAATGAGTCTATCCATGGTATTAGCAAAGAATTAGCAGATGCTATGTCTCAA
ATTCATGACTTTGTACTCTTTCTGGGCAAAGAAGCAAAGGCTATCCAGGGAACAGCTCCT
GATGGAAGTGGAATCAATGAAAAATTAGATGATTTTTCGGCCACTTATGTTGAGGTAATA
AGCAACAAGTTGAGTATGGTGAATTTTGTCCTTGATCTCTCCCATGTGCTGAGTAATGCG
AGCCAACTACACTTCAATATACTTGGTTACAAGAATTCTGAAACAGAAATAAGTACTTCT
GATTGCATAGACAAGGTTGCTTTACCAGAAAATAAAGATCTTCAGCACTCAGGAGAGGTA
TATGCAAATGGTTGCGCTCATTTTTCTGATTCTACTTCTGATCCAGACATTCCTCATGAA
GGAAGTCTTGTTCCTACTTCAGAGTCAACATCAACCTCTTTGAAGTGCTCGTTGGAGGAG
GTTGAACAATTGAAATTAGAGAAAGAAAATATGGCTCTTGATCTTGCTAGATACTCTGAG
AACCTGGAGAGCACTAAATCCCAGTTGACTGAAACTGAGCAACTTCTTGCAGAGGTTAAG
TCACAATTGGTATCTGCTCAAAAGGCAAACAGTTTGGCTGAAACTCAGCTCAAATGCATG
GCAGAGTCATATAACTCACTTGAAACACGGACTGAGGAGTTGCAAACTGAAGTCAACCGT
CTTCAGGCCAAGATAGAAAATCTTGATAATGAGCTTCAAGAGGAAAAGAAGAATCACCAG
GATACTTTAGCTAGTTGCAAGGATCTCGAAGAGCAACTACAAAGGATGGAGAGTGCTGCT
GATCTTGATGCCAAGACTAACCAGGAGAAAGACTTAACAGCTGCAGCAGAGAAGCTAGCT
GAGTGTCAAGAAACCATATTTCTTCTCGGGAAACAGTTGAACTCTTTGCGTCCTCAGACG
GAGTTTATGGGGTCTCCATACATCGATAGAAGTTCAAAAGGGGAGGGCTTTCGGGAAGAA
TCCACAACCACTAGCATGAACATCCATGACAATGATCTAGCTGAGATGGACAGCGCCAGT
TCCGTAAAAGCAACTTGTGAGTCCCCTGTGGATATATATAATGTGTCATACAGTCCCTCG
GACACTGAAGTAAACAATCCATTGAGATCACCAATCAGCTTAAAGTCTCCTAAACACCGG
TCTACTAAGTCTGGCTCTTCGTCATCTGCTGGCCCTACACCTGAAAAACAATCTCGTGGT
TTCAGCCGATTCTTTTCTTCTAAGGGAAAGACCGGATCTTAG