Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009545
CDS Infomation

pacid=37473209 polypeptide=PGSC0003DMP400006641 locus=PGSC0003DMG400003722 ID=PGSC0003DMT400009545.v4.03 annot-version=v4.03
Sequence

ATGGGAAAATCTACAGCTTCTTCTTGCTTAAAGATCATTGCTTGTGGCAGTGATTCTGTT
GACCGTGATGAACTTGAAGCTCATCCTGAGAGTAAAAGCTCAAGCGACAAACGTGGATGG
AGTTTCCGCAAGAAATCTGCCAGGCATCGTGTATTAAGCAATACAGTAGTTTCAGAAACA
CCATCTGGGAACAAGGACTGGCCAGAAGCTGCTAATGCCAATCTGCAAACACAATCTAAC
TCCACCATTCCAGAGAAGGCATCTGTTGTCCAATGGGCAGATGAGAAACCCCAGTTTCCA
ACGGTCGAGAAGTCTCAGGTGTCGGCTGACGAGAAGCCCCAGGTCTTGGCAAATGAGAAC
CCCCAGATCTCAGAGGATGAGAAGCCACAGGTTCTGGAAGATGAGAAGCTCCAGGTCTCA
GTGGATGAGAAGCCCCAAGTCTCCACGGACGCGAAGCCACAGCTCTTGGTGGAAGTCTCA
GTGGATGAAAAGCCCTTGATCTCCGAAAAAGTGAATCTCGAGGTCTCCGAAGATGAGAAG
CCCAGCGTCTCTTCAGATGAAAAGGCCCCCATCTCATCAGAAGAGAACTCCCTGCTCTCA
GACTTGGTGGATGCAAAACAATCAGAGCCAGTAACAGCTAGAGTCAATGATGGTAAAGCT
GATGTCATCCTGGATGAACACGCTCTTGTTATCCAGACTGCAGTCAGAGCATTTCTGGCA
CGAAGAGCTCAATTGAAGCAAAAGCATATAACTAAATTGCAAGCTGCTGTACGTGGACAT
TTAGTTCGCAGGCATGCTGTAGGAACTCTGCGATGTGTTCAAGCTATTGTCAAAATGCAA
ACTCTTGTTCGAGCACATCACACTAATCGCATTGCAGAAGGATCTAGTATCAAGGAAAAG
CTAAAAGGAAAAGAGAACTCAGGAACAAAATCAGAGTTCACATACATTTCTATTTCAAAG
CTACTGAGCAATAGCTTCGCTCGACAGCTCCTTGAATCAACTCCAAGGACCAAAAGTATA
AATATTAAGTGTGACCCTTCCAAATCTGATTCTGCCTGGAAATGGTTAGAGAGATGGATG
TCTGTTGCATCACCAGGAAATCAACTGTCACCACAGTCAGAATTATCTGCCGAGCAGCAG
GAGAATGAACCTACCGAGCACCACAGTAACCTTATGGAAAGTAAAGTTCAGCTTGATTCC
GAGTCAATGGACTTCAGAGAGGGTGAGGAGGCATCGCTGTCTGCAGTGCCATCTGAAAGT
GATGATAATTTGATCACTTATGATGCAGACAGCTTAGATTTTCAAGCCGACATACCGACT
TTACCTCCTCAGCCTCTGAATGTTGATGAAAAAACTTCAAGAGATGACTGTTCTATTCCT
ACTCAACTTAAGGAGGCCAGGGCTCTTCCTGAGATGGAGCCCAATTCTTTCCCTGCAAAC
ACTGAAGTTGAGAGAGAGGATACACATTCCCTTGAACTTTCAGAGACCGAGAGCAAAAAG
ATTTTACATGGATCAAGAAAGGCAAGTAATCCTGCATTTATTGCTGCTCAGTCAAAGTTT
GAGGAACTCACTTTGGCAGCTAAATCAACCAAAGTGACTAGTTTGCCCAATCATAAAACT
GAAGATGAATCTAGTGAAGATACGTTTTCAACTATCACTGATCATTCATTTGGGGCAAGG
GAAGCTGCTCCGTCAGAAAATTCTGTTCCTCATAGTACAAGAGCTCAAGTTGGTGGTTCA
GAATGTGGCACGGAGCTTTCTATTTCTTCTACCCTGGATTCACCAGATAGGTCTGACGTC
GGAGGTCATGTATTTGAGCAGGAACTTCCTTCCAATGGTGGAACTGACCATCGTAAGAGC
AATGGATACCCTCACATTGAAGATGATAGTACAAATGACTTATCACACTCCGACTATGTT
CAGGCAGGGAGAGAGGATCCTACTGATGATGCTAAGCATGTAGATGTTATGGTCAGTTCA
GATCTATCACCCGAAGAACAGAAGCCAGAAAACAATTCAGTTAATGTTCAAATAGAGCAC
GAAGCTAAGACGGATCGACTATACAAGTCATCACCAGACGCATCTCCAAGGAGCCATATA
ACCGTCCCTGAATCCCAAGGGACACCTTCTAGTCAAGTGTCAGTGAATCCTAAGAAGCTA
AAAAGTGAAAACAGTGGATCAATTCCCAAGCCCCGTTCTGCACCTGCTAGCAAAAAGTCT
CCTTCAAAGCTAAACCATGCTCCAGGCACAACTAGTTCGGAACAATTATCTAAGGATCAT
AATAAAAATGAGAAGCGACGAAACTCGTTTGGTTCAACAAAAGCTGGACAAGCTGATCAG
GAGGCTAGAGATAACAGTACTAGCAGTTCTCTCCCAAGTTACATGCAAGCAACAGAATCT
GCAAGAGCCAAAGTTATCCCAAATAGCTCCCCAAGATCTAGTCCAGATGTCCACAATAAA
GATGAATATATCAAAAAGAGACACTCTCTCCCTGGTTCAAATGGTAGGCAAGGTTCACCT
CGTATCCAGCGGTCTCTGTCTAATGCACAGCAGGGTGCAAAGGGAAATGGAACTCAATCT
CCACAGGAGAGGAAGTGGCAGAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400006641
PEP Infomation

pacid=37473209 transcript=PGSC0003DMT400009545 locus=PGSC0003DMG400003722 ID=PGSC0003DMT400009545.v4.03 annot-version=v4.03
Sequence

MGKSTASSCLKIIACGSDSVDRDELEAHPESKSSSDKRGWSFRKKSARHRVLSNTVVSET
PSGNKDWPEAANANLQTQSNSTIPEKASVVQWADEKPQFPTVEKSQVSADEKPQVLANEN
PQISEDEKPQVLEDEKLQVSVDEKPQVSTDAKPQLLVEVSVDEKPLISEKVNLEVSEDEK
PSVSSDEKAPISSEENSLLSDLVDAKQSEPVTARVNDGKADVILDEHALVIQTAVRAFLA
RRAQLKQKHITKLQAAVRGHLVRRHAVGTLRCVQAIVKMQTLVRAHHTNRIAEGSSIKEK
LKGKENSGTKSEFTYISISKLLSNSFARQLLESTPRTKSINIKCDPSKSDSAWKWLERWM
SVASPGNQLSPQSELSAEQQENEPTEHHSNLMESKVQLDSESMDFREGEEASLSAVPSES
DDNLITYDADSLDFQADIPTLPPQPLNVDEKTSRDDCSIPTQLKEARALPEMEPNSFPAN
TEVEREDTHSLELSETESKKILHGSRKASNPAFIAAQSKFEELTLAAKSTKVTSLPNHKT
EDESSEDTFSTITDHSFGAREAAPSENSVPHSTRAQVGGSECGTELSISSTLDSPDRSDV
GGHVFEQELPSNGGTDHRKSNGYPHIEDDSTNDLSHSDYVQAGREDPTDDAKHVDVMVSS
DLSPEEQKPENNSVNVQIEHEAKTDRLYKSSPDASPRSHITVPESQGTPSSQVSVNPKKL
KSENSGSIPKPRSAPASKKSPSKLNHAPGTTSSEQLSKDHNKNEKRRNSFGSTKAGQADQ
EARDNSTSSSLPSYMQATESARAKVIPNSSPRSSPDVHNKDEYIKKRHSLPGSNGRQGSP
RIQRSLSNAQQGAKGNGTQSPQERKWQR*

Transcript Sequence

Transcript ID

PGSC0003DMT400009545
Transcript Infomation

pacid=37473209 locus=PGSC0003DMG400003722 ID=PGSC0003DMT400009545.v4.03 annot-version=v4.03
Sequence

ATGGGAAAATCTACAGCTTCTTCTTGCTTAAAGATCATTGCTTGTGGCAGTGATTCTGTT
GACCGTGATGAACTTGAAGCTCATCCTGAGAGTAAAAGCTCAAGCGACAAACGTGGATGG
AGTTTCCGCAAGAAATCTGCCAGGCATCGTGTATTAAGCAATACAGTAGTTTCAGAAACA
CCATCTGGGAACAAGGACTGGCCAGAAGCTGCTAATGCCAATCTGCAAACACAATCTAAC
TCCACCATTCCAGAGAAGGCATCTGTTGTCCAATGGGCAGATGAGAAACCCCAGTTTCCA
ACGGTCGAGAAGTCTCAGGTGTCGGCTGACGAGAAGCCCCAGGTCTTGGCAAATGAGAAC
CCCCAGATCTCAGAGGATGAGAAGCCACAGGTTCTGGAAGATGAGAAGCTCCAGGTCTCA
GTGGATGAGAAGCCCCAAGTCTCCACGGACGCGAAGCCACAGCTCTTGGTGGAAGTCTCA
GTGGATGAAAAGCCCTTGATCTCCGAAAAAGTGAATCTCGAGGTCTCCGAAGATGAGAAG
CCCAGCGTCTCTTCAGATGAAAAGGCCCCCATCTCATCAGAAGAGAACTCCCTGCTCTCA
GACTTGGTGGATGCAAAACAATCAGAGCCAGTAACAGCTAGAGTCAATGATGGTAAAGCT
GATGTCATCCTGGATGAACACGCTCTTGTTATCCAGACTGCAGTCAGAGCATTTCTGGCA
CGAAGAGCTCAATTGAAGCAAAAGCATATAACTAAATTGCAAGCTGCTGTACGTGGACAT
TTAGTTCGCAGGCATGCTGTAGGAACTCTGCGATGTGTTCAAGCTATTGTCAAAATGCAA
ACTCTTGTTCGAGCACATCACACTAATCGCATTGCAGAAGGATCTAGTATCAAGGAAAAG
CTAAAAGGAAAAGAGAACTCAGGAACAAAATCAGAGTTCACATACATTTCTATTTCAAAG
CTACTGAGCAATAGCTTCGCTCGACAGCTCCTTGAATCAACTCCAAGGACCAAAAGTATA
AATATTAAGTGTGACCCTTCCAAATCTGATTCTGCCTGGAAATGGTTAGAGAGATGGATG
TCTGTTGCATCACCAGGAAATCAACTGTCACCACAGTCAGAATTATCTGCCGAGCAGCAG
GAGAATGAACCTACCGAGCACCACAGTAACCTTATGGAAAGTAAAGTTCAGCTTGATTCC
GAGTCAATGGACTTCAGAGAGGGTGAGGAGGCATCGCTGTCTGCAGTGCCATCTGAAAGT
GATGATAATTTGATCACTTATGATGCAGACAGCTTAGATTTTCAAGCCGACATACCGACT
TTACCTCCTCAGCCTCTGAATGTTGATGAAAAAACTTCAAGAGATGACTGTTCTATTCCT
ACTCAACTTAAGGAGGCCAGGGCTCTTCCTGAGATGGAGCCCAATTCTTTCCCTGCAAAC
ACTGAAGTTGAGAGAGAGGATACACATTCCCTTGAACTTTCAGAGACCGAGAGCAAAAAG
ATTTTACATGGATCAAGAAAGGCAAGTAATCCTGCATTTATTGCTGCTCAGTCAAAGTTT
GAGGAACTCACTTTGGCAGCTAAATCAACCAAAGTGACTAGTTTGCCCAATCATAAAACT
GAAGATGAATCTAGTGAAGATACGTTTTCAACTATCACTGATCATTCATTTGGGGCAAGG
GAAGCTGCTCCGTCAGAAAATTCTGTTCCTCATAGTACAAGAGCTCAAGTTGGTGGTTCA
GAATGTGGCACGGAGCTTTCTATTTCTTCTACCCTGGATTCACCAGATAGGTCTGACGTC
GGAGGTCATGTATTTGAGCAGGAACTTCCTTCCAATGGTGGAACTGACCATCGTAAGAGC
AATGGATACCCTCACATTGAAGATGATAGTACAAATGACTTATCACACTCCGACTATGTT
CAGGCAGGGAGAGAGGATCCTACTGATGATGCTAAGCATGTAGATGTTATGGTCAGTTCA
GATCTATCACCCGAAGAACAGAAGCCAGAAAACAATTCAGTTAATGTTCAAATAGAGCAC
GAAGCTAAGACGGATCGACTATACAAGTCATCACCAGACGCATCTCCAAGGAGCCATATA
ACCGTCCCTGAATCCCAAGGGACACCTTCTAGTCAAGTGTCAGTGAATCCTAAGAAGCTA
AAAAGTGAAAACAGTGGATCAATTCCCAAGCCCCGTTCTGCACCTGCTAGCAAAAAGTCT
CCTTCAAAGCTAAACCATGCTCCAGGCACAACTAGTTCGGAACAATTATCTAAGGATCAT
AATAAAAATGAGAAGCGACGAAACTCGTTTGGTTCAACAAAAGCTGGACAAGCTGATCAG
GAGGCTAGAGATAACAGTACTAGCAGTTCTCTCCCAAGTTACATGCAAGCAACAGAATCT
GCAAGAGCCAAAGTTATCCCAAATAGCTCCCCAAGATCTAGTCCAGATGTCCACAATAAA
GATGAATATATCAAAAAGAGACACTCTCTCCCTGGTTCAAATGGTAGGCAAGGTTCACCT
CGTATCCAGCGGTCTCTGTCTAATGCACAGCAGGGTGCAAAGGGAAATGGAACTCAATCT
CCACAGGAGAGGAAGTGGCAGAGATGA