Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009537
CDS Infomation

pacid=37472180 polypeptide=PGSC0003DMP400006633 locus=PGSC0003DMG400003719 ID=PGSC0003DMT400009537.v4.03 annot-version=v4.03
Sequence

ATGTCTATGCTTCGTGTCAAAAGTGCTAAATTTTCCATGTATCAGTGGTTGATGCAGCAT
CAGCCATCAATGAAGCAGATAATGGCCATCATGGCAGAAAGAGATGCTGCCATACAAGAG
AGGAATCTGGCCCTTTCTGAAAAAAAGGCTGCCTTGGCAGAGCGTGACATGGCTATCCTG
CAGCGGGATTCGGCAATAGCAGAACGAAATAATGCCATCATGGAACGGGATAATGCCATT
GCTACACTTCAGTATCGTGAAAATGCTATGACTGGTGGTCAGATTGTCCGTGGAGTGAAA
CATATGCACCATCCTCAGCAACATGTACATCACCAGCCACATATGGGAGAACCAACATAT
AACCCCAGAGAAATGCACATGGTTGAAGCCATACCAGTTTCCCCACCTGCTCCGGAGCCA
GCAAAGCCCCGTCGAAACAAAAGAGCTAAGGAGCCAAAGGCAGTGACAGGTTCCAAGAAG
ACTCCAAAAGCATCAAAGAAAGTAAAAAGGGAAACTGAAGATCTTAACCAAACAACATAT
GGCAAGTCTCCGGAGTGGAAGGGTGCACAAGAGATGGTCGGGGCAAGCGATGACCTTAAC
AGACAGTTAGCTGTGTCAAAACCCGACTGGAAGGATCAGGACCTCGGGCTCAACCAAGTT
GCTTTCGATGAAACAACCATGCCAGTCCCAGTTTGTTCCTGCACCGGAGTCTTAAGACCT
TGCTACAAATGGGGAAATGGAGGTTGGCAATCTTCATGTTGCACAACCAATTTGTCGATG
TATCCTCTACCAGCTGTTCCCAACAAACGACATGCTCGAATTGGTGGTAGAAAAATGAGT
GGAAGTGCGTTCACCAAGCTGCTTAGTCGCCTGGCAGCTGAAGGCCATGATCTATCAAAT
CCAGTTGATCTTAAGAACAACTGGGCAAAGCATGGGACGAATCGCTACATCACCATCAAA
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400006633
PEP Infomation

pacid=37472180 transcript=PGSC0003DMT400009537 locus=PGSC0003DMG400003719 ID=PGSC0003DMT400009537.v4.03 annot-version=v4.03
Sequence

MSMLRVKSAKFSMYQWLMQHQPSMKQIMAIMAERDAAIQERNLALSEKKAALAERDMAIL
QRDSAIAERNNAIMERDNAIATLQYRENAMTGGQIVRGVKHMHHPQQHVHHQPHMGEPTY
NPREMHMVEAIPVSPPAPEPAKPRRNKRAKEPKAVTGSKKTPKASKKVKRETEDLNQTTY
GKSPEWKGAQEMVGASDDLNRQLAVSKPDWKDQDLGLNQVAFDETTMPVPVCSCTGVLRP
CYKWGNGGWQSSCCTTNLSMYPLPAVPNKRHARIGGRKMSGSAFTKLLSRLAAEGHDLSN
PVDLKNNWAKHGTNRYITIK*

Transcript Sequence

Transcript ID

PGSC0003DMT400009537
Transcript Infomation

pacid=37472180 locus=PGSC0003DMG400003719 ID=PGSC0003DMT400009537.v4.03 annot-version=v4.03
Sequence

ATGTCTATGCTTCGTGTCAAAAGTGCTAAATTTTCCATGTATCAGTGGTTGATGCAGCAT
CAGCCATCAATGAAGCAGATAATGGCCATCATGGCAGAAAGAGATGCTGCCATACAAGAG
AGGAATCTGGCCCTTTCTGAAAAAAAGGCTGCCTTGGCAGAGCGTGACATGGCTATCCTG
CAGCGGGATTCGGCAATAGCAGAACGAAATAATGCCATCATGGAACGGGATAATGCCATT
GCTACACTTCAGTATCGTGAAAATGCTATGACTGGTGGTCAGATTGTCCGTGGAGTGAAA
CATATGCACCATCCTCAGCAACATGTACATCACCAGCCACATATGGGAGAACCAACATAT
AACCCCAGAGAAATGCACATGGTTGAAGCCATACCAGTTTCCCCACCTGCTCCGGAGCCA
GCAAAGCCCCGTCGAAACAAAAGAGCTAAGGAGCCAAAGGCAGTGACAGGTTCCAAGAAG
ACTCCAAAAGCATCAAAGAAAGTAAAAAGGGAAACTGAAGATCTTAACCAAACAACATAT
GGCAAGTCTCCGGAGTGGAAGGGTGCACAAGAGATGGTCGGGGCAAGCGATGACCTTAAC
AGACAGTTAGCTGTGTCAAAACCCGACTGGAAGGATCAGGACCTCGGGCTCAACCAAGTT
GCTTTCGATGAAACAACCATGCCAGTCCCAGTTTGTTCCTGCACCGGAGTCTTAAGACCT
TGCTACAAATGGGGAAATGGAGGTTGGCAATCTTCATGTTGCACAACCAATTTGTCGATG
TATCCTCTACCAGCTGTTCCCAACAAACGACATGCTCGAATTGGTGGTAGAAAAATGAGT
GGAAGTGCGTTCACCAAGCTGCTTAGTCGCCTGGCAGCTGAAGGCCATGATCTATCAAAT
CCAGTTGATCTTAAGAACAACTGGGCAAAGCATGGGACGAATCGCTACATCACCATCAAA
TAA