Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009526
CDS Infomation

pacid=37473179 polypeptide=PGSC0003DMP400006627 locus=PGSC0003DMG400003716 ID=PGSC0003DMT400009526.v4.03 annot-version=v4.03
Sequence

ATGGCCATTAAAACAAGTCTTGTTTACAACATTGTTCTTTGGCAGCTGCATTTGCTTCTA
TTACTATCATGTCATGACTTGAACTTGGCTAATGCTGCAGGTGGCAAATGGGATTTACTT
ATGCCCAACATTGGCATTTCCGCCATGCACATGCAACTCCTCAACAACGATAGAGTCATC
ATGTACGATCGTACTGACTTTGGTGCATCCAACATCCCCTTGCCTGATGGCAAATGTCGT
AACAATCCTAAAGAACTCGCCTTGAAAGTCGATTGCACTGCCCACTCTGTTGAATACGAC
GTGTCCACTAATTCAATACGACCTCTCATGGTCCAGACCGACGTGTGGTGCTCCTCGGGC
TCTGCCACCTCGGATGGTTCGTTGGTCCAAACTGGTGGATTCAATGATGGTAAACTTATG
GTGAGAACTTTTAACCCATGCAACACTTGTGATTGGCAAGAAATGGGAGATGGACTAGTT
CAAAGTCGATGGTATTCCACCAATCATATTCTTCCTGACGGAAGCCAAATTATAATAGGA
GGCCGTGATGCTTTTAACTACGAGTTTTTTCCCAAAACTGCTTCAACCAACAACGTATTT
AGTCTACCTTTCCTTCAACAAACTAATGTTCCTAGAGAGGAAAACAATTTATACCCATTT
GTTTTTCTTAACGTCGATGGGAATTTATTCATTTTCACCAACGATCGAGCTATATTGCTC
GATTACACAACAAATACGATAGTGAAAACGTACCCACAAATACCCGGTGGTGACCCAAGA
AACTATCCAAGTACGGGTTCTGCAGTTCTTCTTCCTTTAAAGAACTTACGTTCACAAACA
GTGTTTGTTCAAGCTGAGGTTTTGGTGTGTGGTGGAGCACCAAAAGGCTCATACCTCAGA
GCAACAAAAGGGGATTTTGTGGGTGCATTAAATACTTGCGGGCGGATTACAATTACCGAC
CCGAATCCACAATGGACCATGGAGACCATGCCACTACCTCGAACAATGGGTGATATGGTA
ATTCTACCAAACGGTAACGTTTTGATTGTTAATGGAGCCGCGACGGGTACAGCTGGATGG
CAAATTGCAAGGAACCCGGTTTTGAGTCCGGTGATTTACCGACCCGATAACCCATCTGAT
TCTAGATTCGAGGTACAAACCCCGAATGCCATACCTAGAATGTACCATTCAACAGCCGTT
CTACTCCGAGATGGTCGGGTTCTCGTCGGCGGTAGCAATCCAAATGAGCTTTACAATTTC
ACTGGAGTAGTTTTTCCAACTGAGTTAAGCTTAGAGGCATTTTCACCATCTTATCTGGAT
GCGGAATTTGCTAATCTACGACCACAAATCATTTCTCCTGATTCACATCTTAAATTCACG
TATGGACAACGTGTTGACATTCGATTTACTGCTTTAGGATTACTAAATCGAGATTCGATC
AAAGTGACTATTGTTGCACCGGGTTTTAATACACATTCGAATACGATGAATCAAAGAATG
TTGGTACTTCCAAGAGGAATTGTACGACAAGTAGGACGATTTGTGTATGAAGTGAGTTGT
GTATTTCCGAATTCGGGTAAATTAGCACCACCCGGTTACTATCTTCTATTTGTGGTTCAT
CAGGACATCCCAAGTGAGGCAATTTGGGTCAGGGTCAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400006627
PEP Infomation

pacid=37473179 transcript=PGSC0003DMT400009526 locus=PGSC0003DMG400003716 ID=PGSC0003DMT400009526.v4.03 annot-version=v4.03
Sequence

MAIKTSLVYNIVLWQLHLLLLLSCHDLNLANAAGGKWDLLMPNIGISAMHMQLLNNDRVI
MYDRTDFGASNIPLPDGKCRNNPKELALKVDCTAHSVEYDVSTNSIRPLMVQTDVWCSSG
SATSDGSLVQTGGFNDGKLMVRTFNPCNTCDWQEMGDGLVQSRWYSTNHILPDGSQIIIG
GRDAFNYEFFPKTASTNNVFSLPFLQQTNVPREENNLYPFVFLNVDGNLFIFTNDRAILL
DYTTNTIVKTYPQIPGGDPRNYPSTGSAVLLPLKNLRSQTVFVQAEVLVCGGAPKGSYLR
ATKGDFVGALNTCGRITITDPNPQWTMETMPLPRTMGDMVILPNGNVLIVNGAATGTAGW
QIARNPVLSPVIYRPDNPSDSRFEVQTPNAIPRMYHSTAVLLRDGRVLVGGSNPNELYNF
TGVVFPTELSLEAFSPSYLDAEFANLRPQIISPDSHLKFTYGQRVDIRFTALGLLNRDSI
KVTIVAPGFNTHSNTMNQRMLVLPRGIVRQVGRFVYEVSCVFPNSGKLAPPGYYLLFVVH
QDIPSEAIWVRVN*

Transcript Sequence

Transcript ID

PGSC0003DMT400009526
Transcript Infomation

pacid=37473179 locus=PGSC0003DMG400003716 ID=PGSC0003DMT400009526.v4.03 annot-version=v4.03
Sequence

ATGGCCATTAAAACAAGTCTTGTTTACAACATTGTTCTTTGGCAGCTGCATTTGCTTCTA
TTACTATCATGTCATGACTTGAACTTGGCTAATGCTGCAGGTGGCAAATGGGATTTACTT
ATGCCCAACATTGGCATTTCCGCCATGCACATGCAACTCCTCAACAACGATAGAGTCATC
ATGTACGATCGTACTGACTTTGGTGCATCCAACATCCCCTTGCCTGATGGCAAATGTCGT
AACAATCCTAAAGAACTCGCCTTGAAAGTCGATTGCACTGCCCACTCTGTTGAATACGAC
GTGTCCACTAATTCAATACGACCTCTCATGGTCCAGACCGACGTGTGGTGCTCCTCGGGC
TCTGCCACCTCGGATGGTTCGTTGGTCCAAACTGGTGGATTCAATGATGGTAAACTTATG
GTGAGAACTTTTAACCCATGCAACACTTGTGATTGGCAAGAAATGGGAGATGGACTAGTT
CAAAGTCGATGGTATTCCACCAATCATATTCTTCCTGACGGAAGCCAAATTATAATAGGA
GGCCGTGATGCTTTTAACTACGAGTTTTTTCCCAAAACTGCTTCAACCAACAACGTATTT
AGTCTACCTTTCCTTCAACAAACTAATGTTCCTAGAGAGGAAAACAATTTATACCCATTT
GTTTTTCTTAACGTCGATGGGAATTTATTCATTTTCACCAACGATCGAGCTATATTGCTC
GATTACACAACAAATACGATAGTGAAAACGTACCCACAAATACCCGGTGGTGACCCAAGA
AACTATCCAAGTACGGGTTCTGCAGTTCTTCTTCCTTTAAAGAACTTACGTTCACAAACA
GTGTTTGTTCAAGCTGAGGTTTTGGTGTGTGGTGGAGCACCAAAAGGCTCATACCTCAGA
GCAACAAAAGGGGATTTTGTGGGTGCATTAAATACTTGCGGGCGGATTACAATTACCGAC
CCGAATCCACAATGGACCATGGAGACCATGCCACTACCTCGAACAATGGGTGATATGGTA
ATTCTACCAAACGGTAACGTTTTGATTGTTAATGGAGCCGCGACGGGTACAGCTGGATGG
CAAATTGCAAGGAACCCGGTTTTGAGTCCGGTGATTTACCGACCCGATAACCCATCTGAT
TCTAGATTCGAGGTACAAACCCCGAATGCCATACCTAGAATGTACCATTCAACAGCCGTT
CTACTCCGAGATGGTCGGGTTCTCGTCGGCGGTAGCAATCCAAATGAGCTTTACAATTTC
ACTGGAGTAGTTTTTCCAACTGAGTTAAGCTTAGAGGCATTTTCACCATCTTATCTGGAT
GCGGAATTTGCTAATCTACGACCACAAATCATTTCTCCTGATTCACATCTTAAATTCACG
TATGGACAACGTGTTGACATTCGATTTACTGCTTTAGGATTACTAAATCGAGATTCGATC
AAAGTGACTATTGTTGCACCGGGTTTTAATACACATTCGAATACGATGAATCAAAGAATG
TTGGTACTTCCAAGAGGAATTGTACGACAAGTAGGACGATTTGTGTATGAAGTGAGTTGT
GTATTTCCGAATTCGGGTAAATTAGCACCACCCGGTTACTATCTTCTATTTGTGGTTCAT
CAGGACATCCCAAGTGAGGCAATTTGGGTCAGGGTCAATTAA