Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009518
CDS Infomation

pacid=37472065 polypeptide=PGSC0003DMP400006623 locus=PGSC0003DMG400003712 ID=PGSC0003DMT400009518.v4.03 annot-version=v4.03
Sequence

ATGGGGAAGAAAAAGTTCATCGACAAGAAGAAATCAGCTACTTTTCAGTTATTCGCCTGT
GATTCATCGGATCCGGCTTATGAATCCGGGTCCTCCGGCGCCGACAGAGTGTTCGTCAGA
GTTGACAACAATACATCCTACTCAGTCGACGCCTTTCACTCCGCCGATCAATTTAACCCT
GATGACCCGAATTCGATATACGCTGATGCTCCGGAAGATGAAGAGGAGTACAATGGGTGG
GCAGCCGGGTATTCGGGTACCGGAAATCAAACTGTGCTGTTACCTGATGATGTTAGAAAG
GAGATATTGGAGCTAGGGTTTCCTGATGATGGGTATAATTACTTACATCACTTGAGGGAG
ATTAAGAATACCGGTGGAGGCTCTGCTTATTATGAGAATCCTAAAGCTAAGTTTAATGAG
CTTCCTCGTGATGTTAAGGCATATGATGCTTCAAGAGTTGCGGTTGCAAAAGTGGATGAT
GATTCCAATGAGAAATATGTATACAATGTGGCAGCCAAGACGGTAGGGGTAAGAGTTCAG
AAGGCAGTGGATCCTGAAGTTGCTGCTTTGCTAGATGACAGTGATTTGTCACGTTTTGGG
TCTGATGAGGAGGATTTAGAGTTGGAAGAAGATTTTGTTATCACGGCAAACCTACCCGAT
GAGGCAGATACTGTGGAACTTGACAAGAATTTAAGCTTGCTAGAGAGATCAGACGTTGAC
AAACTAGGAAGCAATGATACGGCTGGACATGTGCAGAGAAATGAGGCCAAATTTGCGTCT
ATTGAAGAGAAGCCAAGAGCACGCCGCCCTCTGGATGAACAGTTTGATATGCTTGAACTT
GAAGAGTATGGATCTGATACCGAAGAAGAATATGATGGTGATATGATTGAGGAAAATGAA
TGTCACGAATCCCTTGCAGAAAAGCTTAATCATGCATTTAAGGAGTGTGCCATTGATGGC
TTGGAACTCAATAATTATGGACCAGATAATGCGGAATTGCTTGAACCTGAAGCTGATGTC
ATAAACCGGTGCAGAGAATATGCAGAGAAGTATGAAAATGAAGGTCCAGAGGAAGAAGCA
GCTATTTTTGATGAAAGCAGCAGTGACTCAGAAGTATGGGATTGTGAAACTATAGTGTCA
ACGTATTCAAATCTTGATAACCACCCTGGAAAAATTGTAGCTCCTGAAGCGAGGAGAAAA
AAGTTGCTCCCTGCTATTTCGGAAGCTTCGCCTATAATATCCCTCAAAGGAAAAGCAAAT
CTTCCTGTAGACTATTTGCCTAGCAAGGGAAAGCATGCCTTGCTAAAGGAGGATAAGAAA
AAGCAAGGTTCAGAAAAGGAGGGAAAGGACAACTCAATGAAGGAGCAGCTCAAAAGAAAG
CAACATGGTCAAGAGTCAAAGGAGGAAAAGAAAGAAAGAAAGGCTGCTGTGAAGGAAGAA
CGGCGTGAGGCACGCCGTATGAAAAAAGAAACGAAGGAGCTATACAAGTGCGAAGCACAG
CGTGCCCAGAAGGTTGCTGCTTTTACCGGTCCATCTGCCATACATCTCATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400006623
PEP Infomation

pacid=37472065 transcript=PGSC0003DMT400009518 locus=PGSC0003DMG400003712 ID=PGSC0003DMT400009518.v4.03 annot-version=v4.03
Sequence

MGKKKFIDKKKSATFQLFACDSSDPAYESGSSGADRVFVRVDNNTSYSVDAFHSADQFNP
DDPNSIYADAPEDEEEYNGWAAGYSGTGNQTVLLPDDVRKEILELGFPDDGYNYLHHLRE
IKNTGGGSAYYENPKAKFNELPRDVKAYDASRVAVAKVDDDSNEKYVYNVAAKTVGVRVQ
KAVDPEVAALLDDSDLSRFGSDEEDLELEEDFVITANLPDEADTVELDKNLSLLERSDVD
KLGSNDTAGHVQRNEAKFASIEEKPRARRPLDEQFDMLELEEYGSDTEEEYDGDMIEENE
CHESLAEKLNHAFKECAIDGLELNNYGPDNAELLEPEADVINRCREYAEKYENEGPEEEA
AIFDESSSDSEVWDCETIVSTYSNLDNHPGKIVAPEARRKKLLPAISEASPIISLKGKAN
LPVDYLPSKGKHALLKEDKKKQGSEKEGKDNSMKEQLKRKQHGQESKEEKKERKAAVKEE
RREARRMKKETKELYKCEAQRAQKVAAFTGPSAIHLM*

Transcript Sequence

Transcript ID

PGSC0003DMT400009518
Transcript Infomation

pacid=37472065 locus=PGSC0003DMG400003712 ID=PGSC0003DMT400009518.v4.03 annot-version=v4.03
Sequence

ATGGGGAAGAAAAAGTTCATCGACAAGAAGAAATCAGCTACTTTTCAGTTATTCGCCTGT
GATTCATCGGATCCGGCTTATGAATCCGGGTCCTCCGGCGCCGACAGAGTGTTCGTCAGA
GTTGACAACAATACATCCTACTCAGTCGACGCCTTTCACTCCGCCGATCAATTTAACCCT
GATGACCCGAATTCGATATACGCTGATGCTCCGGAAGATGAAGAGGAGTACAATGGGTGG
GCAGCCGGGTATTCGGGTACCGGAAATCAAACTGTGCTGTTACCTGATGATGTTAGAAAG
GAGATATTGGAGCTAGGGTTTCCTGATGATGGGTATAATTACTTACATCACTTGAGGGAG
ATTAAGAATACCGGTGGAGGCTCTGCTTATTATGAGAATCCTAAAGCTAAGTTTAATGAG
CTTCCTCGTGATGTTAAGGCATATGATGCTTCAAGAGTTGCGGTTGCAAAAGTGGATGAT
GATTCCAATGAGAAATATGTATACAATGTGGCAGCCAAGACGGTAGGGGTAAGAGTTCAG
AAGGCAGTGGATCCTGAAGTTGCTGCTTTGCTAGATGACAGTGATTTGTCACGTTTTGGG
TCTGATGAGGAGGATTTAGAGTTGGAAGAAGATTTTGTTATCACGGCAAACCTACCCGAT
GAGGCAGATACTGTGGAACTTGACAAGAATTTAAGCTTGCTAGAGAGATCAGACGTTGAC
AAACTAGGAAGCAATGATACGGCTGGACATGTGCAGAGAAATGAGGCCAAATTTGCGTCT
ATTGAAGAGAAGCCAAGAGCACGCCGCCCTCTGGATGAACAGTTTGATATGCTTGAACTT
GAAGAGTATGGATCTGATACCGAAGAAGAATATGATGGTGATATGATTGAGGAAAATGAA
TGTCACGAATCCCTTGCAGAAAAGCTTAATCATGCATTTAAGGAGTGTGCCATTGATGGC
TTGGAACTCAATAATTATGGACCAGATAATGCGGAATTGCTTGAACCTGAAGCTGATGTC
ATAAACCGGTGCAGAGAATATGCAGAGAAGTATGAAAATGAAGGTCCAGAGGAAGAAGCA
GCTATTTTTGATGAAAGCAGCAGTGACTCAGAAGTATGGGATTGTGAAACTATAGTGTCA
ACGTATTCAAATCTTGATAACCACCCTGGAAAAATTGTAGCTCCTGAAGCGAGGAGAAAA
AAGTTGCTCCCTGCTATTTCGGAAGCTTCGCCTATAATATCCCTCAAAGGAAAAGCAAAT
CTTCCTGTAGACTATTTGCCTAGCAAGGGAAAGCATGCCTTGCTAAAGGAGGATAAGAAA
AAGCAAGGTTCAGAAAAGGAGGGAAAGGACAACTCAATGAAGGAGCAGCTCAAAAGAAAG
CAACATGGTCAAGAGTCAAAGGAGGAAAAGAAAGAAAGAAAGGCTGCTGTGAAGGAAGAA
CGGCGTGAGGCACGCCGTATGAAAAAAGAAACGAAGGAGCTATACAAGTGCGAAGCACAG
CGTGCCCAGAAGGTTGCTGCTTTTACCGGTCCATCTGCCATACATCTCATGTGA