Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009505
CDS Infomation

pacid=37476279 polypeptide=PGSC0003DMP400006611 locus=PGSC0003DMG402003705 ID=PGSC0003DMT400009505.v4.03 annot-version=v4.03
Sequence

ATGGCGTCTATGGTCTCTCACAGCTCTTCTTCTTCCTTTCTCAAGCTTAATTTTACCAAT
GATTCCTCCTTTTCCTTCTCTGCTACTTTATCCTTTTCTCGCCCACAATTCCCAAATAGT
GCTTCTCAAAAAAGGAACATTAATGAAAATTATAGAGGCTATACTGTAAAGTGTGCACTT
GCAAAAACCAGAATGCCTCCTTCGCCCGCTTCTGATGCATACATAAGAGAACCCCACAAA
TATTTTGATGAGGTGGTTATAACAGTTCGTGCTGGAGATGGAGGGCATGGTGCCGTTCTT
AGTATGCCTAACAATAAAGCTCCATCTAAGTCACAAGGAAAATTTGACAGAGATAAGACA
AAGAAGAAAGCCTCTTATAAAAGGGACTTTGATGGTTCAATAATCCTTCCAATGGGGGGA
CATGGTGGCGATGTTGTCTTATATGCAGATGAGAGCAAAGATTCACTGTTGGAGTTTCAC
AACAAGAGTAAGCACAAGGCGAAGCGTGGGGGAAATGTTGATTCTATGGGTGTGTTAACA
TCTCACATGCAAAATGGAGCTGCTTCACCAACATTGCGAATTCCCGTTCCACTAGGTACT
GTTGTCAAACTTAAAAAAGGAAAGTTTTTGGCAGATCTAGCTAATCCAGGTGATGAAGTT
CTTGTAGCGAGGGGAGGACAAGGAGGGATTAGCTTGTTGGAAGTTCCGGAGTACAAAAGG
AAACAAATGACGACTTTAACAACAAATATAATGAGAGATGCCACTGATAAGGTTTTATCT
TTTGGACAGTCTGGAGAGGAAGTTAACCTGCAGTTGATACTGAGAGTTGTTGCTGATGTG
GGTCTTGTTGGACTTCCAAATGCTGGAAAATCAACTCTATTGGCTGCTATTACACATGCA
AGACCCGATATTGCTGATTATCCATTCACAACGCTGATGCCAAACCTTGGACGTCTTGAT
GGTGACCCAAGTTTAGGAGCAGACAAATATTCATCTGAAGCAACTCTAGCAGATCTGCCT
GGTCTAATAGAAGGTGCACATTTGGGAAAGGGTCTAGGGCGTAATTTCTTGAGGCACTTG
AGGAGAACAAGATTGTTGGTACATGTCGTTGATGCAGCTGCTGAAGACCCAGTTGGTGAT
TACAGAACTGTAAAAGAAGAACTGCGGATGTACAATCCTGAGTACCTTGACAGGCCGTAC
CTTGTAGTGTTAAACAAGATTGATAAACCTGAGGCAATAGACAGACTTCCTACCTTGACT
GAAGAAATACGGAAAATTGGTTATGAGAGAATATCTCCCAAGCGTGACACAAGCTCTGGA
GCTGTGGCTGAGTCCATTTCTGTTGACGAGAGCCAAAACAGTGAGCTTTCTAACAGGTCA
TCTTCCAACGATCAGAAGGTTAAAGAACTTGAAGAGTATCCACGCCCTCTTGCTGTTGTG
GGTGTTAGTGTACTGAAAGGGATTAAAGTCAATGAGATGTTAAAGGCGATAAGGGCGGCG
TTACGGGAATTCCTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400006611
PEP Infomation

pacid=37476279 transcript=PGSC0003DMT400009505 locus=PGSC0003DMG402003705 ID=PGSC0003DMT400009505.v4.03 annot-version=v4.03
Sequence

MASMVSHSSSSSFLKLNFTNDSSFSFSATLSFSRPQFPNSASQKRNINENYRGYTVKCAL
AKTRMPPSPASDAYIREPHKYFDEVVITVRAGDGGHGAVLSMPNNKAPSKSQGKFDRDKT
KKKASYKRDFDGSIILPMGGHGGDVVLYADESKDSLLEFHNKSKHKAKRGGNVDSMGVLT
SHMQNGAASPTLRIPVPLGTVVKLKKGKFLADLANPGDEVLVARGGQGGISLLEVPEYKR
KQMTTLTTNIMRDATDKVLSFGQSGEEVNLQLILRVVADVGLVGLPNAGKSTLLAAITHA
RPDIADYPFTTLMPNLGRLDGDPSLGADKYSSEATLADLPGLIEGAHLGKGLGRNFLRHL
RRTRLLVHVVDAAAEDPVGDYRTVKEELRMYNPEYLDRPYLVVLNKIDKPEAIDRLPTLT
EEIRKIGYERISPKRDTSSGAVAESISVDESQNSELSNRSSSNDQKVKELEEYPRPLAVV
GVSVLKGIKVNEMLKAIRAALREFL*

Transcript Sequence

Transcript ID

PGSC0003DMT400009505
Transcript Infomation

pacid=37476279 locus=PGSC0003DMG402003705 ID=PGSC0003DMT400009505.v4.03 annot-version=v4.03
Sequence

ATGGCGTCTATGGTCTCTCACAGCTCTTCTTCTTCCTTTCTCAAGCTTAATTTTACCAAT
GATTCCTCCTTTTCCTTCTCTGCTACTTTATCCTTTTCTCGCCCACAATTCCCAAATAGT
GCTTCTCAAAAAAGGAACATTAATGAAAATTATAGAGGCTATACTGTAAAGTGTGCACTT
GCAAAAACCAGAATGCCTCCTTCGCCCGCTTCTGATGCATACATAAGAGAACCCCACAAA
TATTTTGATGAGGTGGTTATAACAGTTCGTGCTGGAGATGGAGGGCATGGTGCCGTTCTT
AGTATGCCTAACAATAAAGCTCCATCTAAGTCACAAGGAAAATTTGACAGAGATAAGACA
AAGAAGAAAGCCTCTTATAAAAGGGACTTTGATGGTTCAATAATCCTTCCAATGGGGGGA
CATGGTGGCGATGTTGTCTTATATGCAGATGAGAGCAAAGATTCACTGTTGGAGTTTCAC
AACAAGAGTAAGCACAAGGCGAAGCGTGGGGGAAATGTTGATTCTATGGGTGTGTTAACA
TCTCACATGCAAAATGGAGCTGCTTCACCAACATTGCGAATTCCCGTTCCACTAGGTACT
GTTGTCAAACTTAAAAAAGGAAAGTTTTTGGCAGATCTAGCTAATCCAGGTGATGAAGTT
CTTGTAGCGAGGGGAGGACAAGGAGGGATTAGCTTGTTGGAAGTTCCGGAGTACAAAAGG
AAACAAATGACGACTTTAACAACAAATATAATGAGAGATGCCACTGATAAGGTTTTATCT
TTTGGACAGTCTGGAGAGGAAGTTAACCTGCAGTTGATACTGAGAGTTGTTGCTGATGTG
GGTCTTGTTGGACTTCCAAATGCTGGAAAATCAACTCTATTGGCTGCTATTACACATGCA
AGACCCGATATTGCTGATTATCCATTCACAACGCTGATGCCAAACCTTGGACGTCTTGAT
GGTGACCCAAGTTTAGGAGCAGACAAATATTCATCTGAAGCAACTCTAGCAGATCTGCCT
GGTCTAATAGAAGGTGCACATTTGGGAAAGGGTCTAGGGCGTAATTTCTTGAGGCACTTG
AGGAGAACAAGATTGTTGGTACATGTCGTTGATGCAGCTGCTGAAGACCCAGTTGGTGAT
TACAGAACTGTAAAAGAAGAACTGCGGATGTACAATCCTGAGTACCTTGACAGGCCGTAC
CTTGTAGTGTTAAACAAGATTGATAAACCTGAGGCAATAGACAGACTTCCTACCTTGACT
GAAGAAATACGGAAAATTGGTTATGAGAGAATATCTCCCAAGCGTGACACAAGCTCTGGA
GCTGTGGCTGAGTCCATTTCTGTTGACGAGAGCCAAAACAGTGAGCTTTCTAACAGGTCA
TCTTCCAACGATCAGAAGGTTAAAGAACTTGAAGAGTATCCACGCCCTCTTGCTGTTGTG
GGTGTTAGTGTACTGAAAGGGATTAAAGTCAATGAGATGTTAAAGGCGATAAGGGCGGCG
TTACGGGAATTCCTATGA