Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009496
CDS Infomation

pacid=37476037 polypeptide=PGSC0003DMP400006604 locus=PGSC0003DMG400003703 ID=PGSC0003DMT400009496.v4.03 annot-version=v4.03
Sequence

ATGCAAAAATTCACCAATAAAATAGTTGAGATGATGAAGAGTGAAAACTTGTTTGAATCT
CAAGGAGGTCCCATTATATTGTCTCAGATTGAAAATGAATATCAACCAGAAAGGGAGGCG
CTTGGAGCAGCTGGTGAAGCATATGTCCAATGGGCTGCACAAATGGCTGTTGGATTAAAT
ACTGGTGTCCCGTGGGTTATGTGCAAAGAGGATGATGCCCCTGACCCTATTATAAATACA
TGCAATGGTTTTTACTGTGATGAATTTTCTCCCAACAAACCTTACAAACCAACTATGTGG
ACTGAAGCTTGGACTGGCTGGTTCACGGAGTTTGGTGGCACAATACCTATGAGGCCAGTT
CAAGATTTGGCATTTGCAGTTGCTCGTTTCATACAAAAAGGTGGCTCATTTGTTAATTAC
TACATGTTCCACGGGGGAACCAACTTTGGCCGTACAGCTGGAGGACCTTTTATAACAACA
AGTTATGACTATGATGCTCCCATCGATGAATATGGTTTGATCAGGGAACCTAAATATAGC
CATCTAAAGGAGTTCCACAGGGTAATTAAACTATGTGAGAGCGCTTTATTATCTTCAGAT
CCCACTGTTGTTTCACTAGGAAACTATCAGCAGGCTCACGTATTCTCGTCTGGCAAAGGA
AACTGTGCAGCATTTCTCTCAAATTACGACAGTAACTCTGCTGCTACAGTAGTTTTTAAC
AACAAGCACTTTAATCTACCTCCTTGGTCTATCAGTATTCTTCCAGACTGCAGCCATGTT
GCCTTCAATACTGCAAAGGTTGGGGCTCGAACTTCACAAGTGCGTATGACACCAACTGTC
TCTCAGCTCCACTCTTGGGGGGCCTATAGTGAAGATGTATTTTCTTTAGAGGACAGCTCA
ACATTTGAAGCTGTAGGACTTTTGGAGCAGATAAATATCACCAGAGATAACAGTGATTAC
TTGTGGTACATAACAAGTGTCGATATTAGTCCCTCAGAATCATTTCTACGAGGGGGACAA
AAACCAACCCTCAACGTCTACTCAAGTGGACACGCAGTTCATGTTTTTGTAAATGGGAAA
CTCTCAGGATCTTCTTATGGTACTCGGAAGGACACAAAGTTCACTTTCACAGGACCAGTT
GATCTGCAGGCTGGAACAAATAGAATTGAGCTACTGAGCATTGCTGTTGGCCTGCCGGTT
GGATTGAAAGGAGAAACAATGAACTTGATCTCTCAACACGGAGCATCTTCCATTGAATGG
ATTGGTGGTGCAGTAGCTACCCAAGGACAACAACCTCTTAAATGGTATAAGGCTTATTTT
GATGCACCAGAAGGAAATGACCCTGTGGCACTAGACATGAGAAGCATGGGTAAAGGACAA
GTATGGATCAATGGACAAAGCATAGGTCGATATTGGACAGCATCTGCTAATGGCAAATGT
GATGATTTCCACTATGCTGGAACATACAGACAAACAAAATGTCAACTTGGTTGTGGTCAG
CCAACTCAAAAATGGTACCATGTCCCAAGATCTTGGTTGAAACCGACACAAAATTTGCTC
ATCTTGTTCGAGGAAATAGGTGGTGATGTATCAAGGATATTGCTAGTGAAAAGGACAACT
TCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400006604
PEP Infomation

pacid=37476037 transcript=PGSC0003DMT400009496 locus=PGSC0003DMG400003703 ID=PGSC0003DMT400009496.v4.03 annot-version=v4.03
Sequence

MQKFTNKIVEMMKSENLFESQGGPIILSQIENEYQPEREALGAAGEAYVQWAAQMAVGLN
TGVPWVMCKEDDAPDPIINTCNGFYCDEFSPNKPYKPTMWTEAWTGWFTEFGGTIPMRPV
QDLAFAVARFIQKGGSFVNYYMFHGGTNFGRTAGGPFITTSYDYDAPIDEYGLIREPKYS
HLKEFHRVIKLCESALLSSDPTVVSLGNYQQAHVFSSGKGNCAAFLSNYDSNSAATVVFN
NKHFNLPPWSISILPDCSHVAFNTAKVGARTSQVRMTPTVSQLHSWGAYSEDVFSLEDSS
TFEAVGLLEQINITRDNSDYLWYITSVDISPSESFLRGGQKPTLNVYSSGHAVHVFVNGK
LSGSSYGTRKDTKFTFTGPVDLQAGTNRIELLSIAVGLPVGLKGETMNLISQHGASSIEW
IGGAVATQGQQPLKWYKAYFDAPEGNDPVALDMRSMGKGQVWINGQSIGRYWTASANGKC
DDFHYAGTYRQTKCQLGCGQPTQKWYHVPRSWLKPTQNLLILFEEIGGDVSRILLVKRTT
S*

Transcript Sequence

Transcript ID

PGSC0003DMT400009496
Transcript Infomation

pacid=37476037 locus=PGSC0003DMG400003703 ID=PGSC0003DMT400009496.v4.03 annot-version=v4.03
Sequence

ATGCAAAAATTCACCAATAAAATAGTTGAGATGATGAAGAGTGAAAACTTGTTTGAATCT
CAAGGAGGTCCCATTATATTGTCTCAGATTGAAAATGAATATCAACCAGAAAGGGAGGCG
CTTGGAGCAGCTGGTGAAGCATATGTCCAATGGGCTGCACAAATGGCTGTTGGATTAAAT
ACTGGTGTCCCGTGGGTTATGTGCAAAGAGGATGATGCCCCTGACCCTATTATAAATACA
TGCAATGGTTTTTACTGTGATGAATTTTCTCCCAACAAACCTTACAAACCAACTATGTGG
ACTGAAGCTTGGACTGGCTGGTTCACGGAGTTTGGTGGCACAATACCTATGAGGCCAGTT
CAAGATTTGGCATTTGCAGTTGCTCGTTTCATACAAAAAGGTGGCTCATTTGTTAATTAC
TACATGTTCCACGGGGGAACCAACTTTGGCCGTACAGCTGGAGGACCTTTTATAACAACA
AGTTATGACTATGATGCTCCCATCGATGAATATGGTTTGATCAGGGAACCTAAATATAGC
CATCTAAAGGAGTTCCACAGGGTAATTAAACTATGTGAGAGCGCTTTATTATCTTCAGAT
CCCACTGTTGTTTCACTAGGAAACTATCAGCAGGCTCACGTATTCTCGTCTGGCAAAGGA
AACTGTGCAGCATTTCTCTCAAATTACGACAGTAACTCTGCTGCTACAGTAGTTTTTAAC
AACAAGCACTTTAATCTACCTCCTTGGTCTATCAGTATTCTTCCAGACTGCAGCCATGTT
GCCTTCAATACTGCAAAGGTTGGGGCTCGAACTTCACAAGTGCGTATGACACCAACTGTC
TCTCAGCTCCACTCTTGGGGGGCCTATAGTGAAGATGTATTTTCTTTAGAGGACAGCTCA
ACATTTGAAGCTGTAGGACTTTTGGAGCAGATAAATATCACCAGAGATAACAGTGATTAC
TTGTGGTACATAACAAGTGTCGATATTAGTCCCTCAGAATCATTTCTACGAGGGGGACAA
AAACCAACCCTCAACGTCTACTCAAGTGGACACGCAGTTCATGTTTTTGTAAATGGGAAA
CTCTCAGGATCTTCTTATGGTACTCGGAAGGACACAAAGTTCACTTTCACAGGACCAGTT
GATCTGCAGGCTGGAACAAATAGAATTGAGCTACTGAGCATTGCTGTTGGCCTGCCGGTT
GGATTGAAAGGAGAAACAATGAACTTGATCTCTCAACACGGAGCATCTTCCATTGAATGG
ATTGGTGGTGCAGTAGCTACCCAAGGACAACAACCTCTTAAATGGTATAAGGCTTATTTT
GATGCACCAGAAGGAAATGACCCTGTGGCACTAGACATGAGAAGCATGGGTAAAGGACAA
GTATGGATCAATGGACAAAGCATAGGTCGATATTGGACAGCATCTGCTAATGGCAAATGT
GATGATTTCCACTATGCTGGAACATACAGACAAACAAAATGTCAACTTGGTTGTGGTCAG
CCAACTCAAAAATGGTACCATGTCCCAAGATCTTGGTTGAAACCGACACAAAATTTGCTC
ATCTTGTTCGAGGAAATAGGTGGTGATGTATCAAGGATATTGCTAGTGAAAAGGACAACT
TCATGA