Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009483
CDS Infomation

pacid=37472485 polypeptide=PGSC0003DMP400006593 locus=PGSC0003DMG400003697 ID=PGSC0003DMT400009483.v4.03 annot-version=v4.03
Sequence

ATGGATAACGAATTATTTGATAGTGTGAAATTTGAGAAAGAGAAGGCAATTTCTAGGTTT
AATCGGTTTCAGAATATGATGAAGATGCTGCAAATTTTTGAAGTGATTGTGGCGGTTGTT
TTGATTTTCTGGTCCTGGTATCGTATTCCGGCGGCTGTGAAATTATCAGGCGAATTTTTG
CTTCAGGTTTCTGGTTATTTGTTTAAACCTCACGTCGTTTTTTTCATCGGCAATGCGATT
ATTGTTGCAATAGTCGTGCTCCGCCGCCAAACTGACGCCGGAAGCAACAATTCTGTTACT
GATGGTATTGATAGCGATGAAATTCCTTACAGCGAAGATCAACGATCGATAATTTCTGCT
TCCTACTGCAGCAGCGATGTGCTGGATTTATCCTCTGCTTCACTGCCGGAGACACCGGTC
TCAACAATGGAAGATAAGCAGATCGTTTCATCGGAGTATAAGGTTCCGGAGATACAATGC
AACGATATGGCCACAGCAATTGATACAGCAACAAAGCAAATACAGAAGTTCAAAAGGACT
CAATCTGAGAAATTGAAGCGACAAATTACGGCAAATCCACGGCGAGAGCTCCGGCGTTCA
GAAACTGAAATGCGCAGGATAGTTGTCCGTCCTGGCGATAAACAATCAACAGTGCCAGTA
GAGGCAGTTGACACACTGAGCAACGAAGACTTCCGGCTTACAATTGAAGCGTTCATAAAG
AAGAACCAAACCTTCTTCGAAAAACAGAGGTTAGCCGAATCAGAACCAGAAAAATATGAA
CGAATCGGTATCGAAGCCTTCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400006593
PEP Infomation

pacid=37472485 transcript=PGSC0003DMT400009483 locus=PGSC0003DMG400003697 ID=PGSC0003DMT400009483.v4.03 annot-version=v4.03
Sequence

MDNELFDSVKFEKEKAISRFNRFQNMMKMLQIFEVIVAVVLIFWSWYRIPAAVKLSGEFL
LQVSGYLFKPHVVFFIGNAIIVAIVVLRRQTDAGSNNSVTDGIDSDEIPYSEDQRSIISA
SYCSSDVLDLSSASLPETPVSTMEDKQIVSSEYKVPEIQCNDMATAIDTATKQIQKFKRT
QSEKLKRQITANPRRELRRSETEMRRIVVRPGDKQSTVPVEAVDTLSNEDFRLTIEAFIK
KNQTFFEKQRLAESEPEKYERIGIEAF*

Transcript Sequence

Transcript ID

PGSC0003DMT400009483
Transcript Infomation

pacid=37472485 locus=PGSC0003DMG400003697 ID=PGSC0003DMT400009483.v4.03 annot-version=v4.03
Sequence

ATGGATAACGAATTATTTGATAGTGTGAAATTTGAGAAAGAGAAGGCAATTTCTAGGTTT
AATCGGTTTCAGAATATGATGAAGATGCTGCAAATTTTTGAAGTGATTGTGGCGGTTGTT
TTGATTTTCTGGTCCTGGTATCGTATTCCGGCGGCTGTGAAATTATCAGGCGAATTTTTG
CTTCAGGTTTCTGGTTATTTGTTTAAACCTCACGTCGTTTTTTTCATCGGCAATGCGATT
ATTGTTGCAATAGTCGTGCTCCGCCGCCAAACTGACGCCGGAAGCAACAATTCTGTTACT
GATGGTATTGATAGCGATGAAATTCCTTACAGCGAAGATCAACGATCGATAATTTCTGCT
TCCTACTGCAGCAGCGATGTGCTGGATTTATCCTCTGCTTCACTGCCGGAGACACCGGTC
TCAACAATGGAAGATAAGCAGATCGTTTCATCGGAGTATAAGGTTCCGGAGATACAATGC
AACGATATGGCCACAGCAATTGATACAGCAACAAAGCAAATACAGAAGTTCAAAAGGACT
CAATCTGAGAAATTGAAGCGACAAATTACGGCAAATCCACGGCGAGAGCTCCGGCGTTCA
GAAACTGAAATGCGCAGGATAGTTGTCCGTCCTGGCGATAAACAATCAACAGTGCCAGTA
GAGGCAGTTGACACACTGAGCAACGAAGACTTCCGGCTTACAATTGAAGCGTTCATAAAG
AAGAACCAAACCTTCTTCGAAAAACAGAGGTTAGCCGAATCAGAACCAGAAAAATATGAA
CGAATCGGTATCGAAGCCTTCTGA