Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009458
CDS Infomation

pacid=37471557 polypeptide=PGSC0003DMP400006573 locus=PGSC0003DMG400003686 ID=PGSC0003DMT400009458.v4.03 annot-version=v4.03
Sequence

ATGGATAGAAGATCAACATTTCGATTACGCTTTCCTTGGTCTTCTGCATCTGAACCTGAA
CCTGCAACCAAACCAGCCACTCAGCCTAATACCAAATCTACTGGTTCTAGTCGAACAACT
CGTCAGGGGACGAGATCACAGCCTTCCAGCAGCACTAGATCCAAAAATAGCCCTTCCTCT
AGTCCTGCAAATGAAAACTCAACTCCAAAGCAGCCACCAAGTTCCACAACAACCGCGATA
TCTGGAAAGCCTTCTTCACCACCAAAAGCGCCTAGCCAGCCCACCACCACGAGCACAAGC
GCTTTACCTGAAACTCTAACAACTCCCCCTCAACCTTCAGCTGAAAACAAAGCTTCTATC
CAGTCCACCACAAATACAAGCCCTTTACCTGAAACTAGCCCAGTTCTTCCTCAATCTTCA
TCTGAAAACAAAGCTCCTATTGAGTCCTCTACCACAAACACTAAACCAACAAATGGTCCA
GCTAGCCTGAAATCTGAAACTCAAACCCCTACATCCATAATATCTCAGACACCACAATCG
AGTCCTCCAGGAGTTGCTCCCTCCATAACTGAGTCTCAACCCTTAATACCGTCTCAAGAA
GATCAAAGCATCACTTTTAAACCAACTTCACCATCTCCATCCCCGTCTCGTCCAGCTCCT
CAATCACAAGAAATGAGTCAAAAATCCTCCCCAACAAGCAACGGTCCTCAGGTCCTTTCA
ACTGACCAACTTACCCCAAAGGCAGTTAGCACTGCGAGCGGCCAGACTTCTTCAAATCCA
TCTGATATAACCTCTCAAATGCAACCGAACAATCAGACAATTTCCCAGCCAACATCTCCA
CCAAAACAATCACAAGACAGCTCAGAGATTTCTCCCAAATCCACCGAAACACTACCATCA
AACTCTGAAAAAGAACCAATGCCCGCAACAGTTAAGCCTCAATCAGAACAAATGGAGCTT
CCCAAGAAAGAAGCCATATCTGACACATTAACTGAAGCAAAAGATAAGTCACCTGAAAAT
GTAAAACCTTCAGATTCTTCAAGAATCACTAGTGAACCTAAGACAGCCAGGCCGTTGGAG
ACAAACATCCCGGAAACTAAAGAAGTGAAGGAAGTAGTGCAACAGACCACGGATCCAGAC
ATTGTGTTTCAATCAAAGCAAGCATATACAGAGAAGCAAGCCAATTCTGATAATGATCAA
ATTCGGGTGAACCGTGTCTCTAATGGAAAACAGACAAGAACAATTTCAGCTGAACCAGAT
ATACCCCTTAACAAAGAGGTAAAAGATAACATCTCAAAGTTTATTAATAGGATGACAGTT
GGAGATGGCAAGCAAAAATTGGAAGAGGGGCCGGTGAGCGTAATCACCCTTGCAGGGGAT
AACAGAGGAGCATCTATGCAACTTAGTTCAAACTCATCAAGAAAAGGAAAGGCAGTTCAC
ATTCACAGAGGCTACAAACTGAATGCAGATGAAAGTGCCGATGCAACCACAGATGCAGAG
GGAACTTCAAAGGGAAAACAGACAAACGATGCAAGGACGATGAAAGATCAAGAACTAGAG
GCATACATGAACTGCAATGTGCAGGGGCTCAACAACTCAATTACATTTGACAGTACTATT
GAGGGGAAAAATCCAGGTATACATATGACATTCCCTCGTATGCCTTCCGAACCACCAAAA
ACAAGTGAGAAAACTGGACTGTTTGAGGCACACAAGACCGAATATAATGTTACCCGTGCT
CAGAAACATACATACAAGCCAACAATCAAAAGAAGATGTCTCGAAGGGCTTTTCGTTGAA
CCAAGTGATTCTGATTCAGCCAACCCTGAAAAACCTCGGAAACATGGCTGCCATGTTGGC
GGTAAGAAGAAGAGAGACAACGATATTGACATTCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400006573
PEP Infomation

pacid=37471557 transcript=PGSC0003DMT400009458 locus=PGSC0003DMG400003686 ID=PGSC0003DMT400009458.v4.03 annot-version=v4.03
Sequence

MDRRSTFRLRFPWSSASEPEPATKPATQPNTKSTGSSRTTRQGTRSQPSSSTRSKNSPSS
SPANENSTPKQPPSSTTTAISGKPSSPPKAPSQPTTTSTSALPETLTTPPQPSAENKASI
QSTTNTSPLPETSPVLPQSSSENKAPIESSTTNTKPTNGPASLKSETQTPTSIISQTPQS
SPPGVAPSITESQPLIPSQEDQSITFKPTSPSPSPSRPAPQSQEMSQKSSPTSNGPQVLS
TDQLTPKAVSTASGQTSSNPSDITSQMQPNNQTISQPTSPPKQSQDSSEISPKSTETLPS
NSEKEPMPATVKPQSEQMELPKKEAISDTLTEAKDKSPENVKPSDSSRITSEPKTARPLE
TNIPETKEVKEVVQQTTDPDIVFQSKQAYTEKQANSDNDQIRVNRVSNGKQTRTISAEPD
IPLNKEVKDNISKFINRMTVGDGKQKLEEGPVSVITLAGDNRGASMQLSSNSSRKGKAVH
IHRGYKLNADESADATTDAEGTSKGKQTNDARTMKDQELEAYMNCNVQGLNNSITFDSTI
EGKNPGIHMTFPRMPSEPPKTSEKTGLFEAHKTEYNVTRAQKHTYKPTIKRRCLEGLFVE
PSDSDSANPEKPRKHGCHVGGKKKRDNDIDIL*

Transcript Sequence

Transcript ID

PGSC0003DMT400009458
Transcript Infomation

pacid=37471557 locus=PGSC0003DMG400003686 ID=PGSC0003DMT400009458.v4.03 annot-version=v4.03
Sequence

ATGGATAGAAGATCAACATTTCGATTACGCTTTCCTTGGTCTTCTGCATCTGAACCTGAA
CCTGCAACCAAACCAGCCACTCAGCCTAATACCAAATCTACTGGTTCTAGTCGAACAACT
CGTCAGGGGACGAGATCACAGCCTTCCAGCAGCACTAGATCCAAAAATAGCCCTTCCTCT
AGTCCTGCAAATGAAAACTCAACTCCAAAGCAGCCACCAAGTTCCACAACAACCGCGATA
TCTGGAAAGCCTTCTTCACCACCAAAAGCGCCTAGCCAGCCCACCACCACGAGCACAAGC
GCTTTACCTGAAACTCTAACAACTCCCCCTCAACCTTCAGCTGAAAACAAAGCTTCTATC
CAGTCCACCACAAATACAAGCCCTTTACCTGAAACTAGCCCAGTTCTTCCTCAATCTTCA
TCTGAAAACAAAGCTCCTATTGAGTCCTCTACCACAAACACTAAACCAACAAATGGTCCA
GCTAGCCTGAAATCTGAAACTCAAACCCCTACATCCATAATATCTCAGACACCACAATCG
AGTCCTCCAGGAGTTGCTCCCTCCATAACTGAGTCTCAACCCTTAATACCGTCTCAAGAA
GATCAAAGCATCACTTTTAAACCAACTTCACCATCTCCATCCCCGTCTCGTCCAGCTCCT
CAATCACAAGAAATGAGTCAAAAATCCTCCCCAACAAGCAACGGTCCTCAGGTCCTTTCA
ACTGACCAACTTACCCCAAAGGCAGTTAGCACTGCGAGCGGCCAGACTTCTTCAAATCCA
TCTGATATAACCTCTCAAATGCAACCGAACAATCAGACAATTTCCCAGCCAACATCTCCA
CCAAAACAATCACAAGACAGCTCAGAGATTTCTCCCAAATCCACCGAAACACTACCATCA
AACTCTGAAAAAGAACCAATGCCCGCAACAGTTAAGCCTCAATCAGAACAAATGGAGCTT
CCCAAGAAAGAAGCCATATCTGACACATTAACTGAAGCAAAAGATAAGTCACCTGAAAAT
GTAAAACCTTCAGATTCTTCAAGAATCACTAGTGAACCTAAGACAGCCAGGCCGTTGGAG
ACAAACATCCCGGAAACTAAAGAAGTGAAGGAAGTAGTGCAACAGACCACGGATCCAGAC
ATTGTGTTTCAATCAAAGCAAGCATATACAGAGAAGCAAGCCAATTCTGATAATGATCAA
ATTCGGGTGAACCGTGTCTCTAATGGAAAACAGACAAGAACAATTTCAGCTGAACCAGAT
ATACCCCTTAACAAAGAGGTAAAAGATAACATCTCAAAGTTTATTAATAGGATGACAGTT
GGAGATGGCAAGCAAAAATTGGAAGAGGGGCCGGTGAGCGTAATCACCCTTGCAGGGGAT
AACAGAGGAGCATCTATGCAACTTAGTTCAAACTCATCAAGAAAAGGAAAGGCAGTTCAC
ATTCACAGAGGCTACAAACTGAATGCAGATGAAAGTGCCGATGCAACCACAGATGCAGAG
GGAACTTCAAAGGGAAAACAGACAAACGATGCAAGGACGATGAAAGATCAAGAACTAGAG
GCATACATGAACTGCAATGTGCAGGGGCTCAACAACTCAATTACATTTGACAGTACTATT
GAGGGGAAAAATCCAGGTATACATATGACATTCCCTCGTATGCCTTCCGAACCACCAAAA
ACAAGTGAGAAAACTGGACTGTTTGAGGCACACAAGACCGAATATAATGTTACCCGTGCT
CAGAAACATACATACAAGCCAACAATCAAAAGAAGATGTCTCGAAGGGCTTTTCGTTGAA
CCAAGTGATTCTGATTCAGCCAACCCTGAAAAACCTCGGAAACATGGCTGCCATGTTGGC
GGTAAGAAGAAGAGAGACAACGATATTGACATTCTTTGA