Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009404
CDS Infomation

pacid=37427108 polypeptide=PGSC0003DMP400006537 locus=PGSC0003DMG400003654 ID=PGSC0003DMT400009404.v4.03 annot-version=v4.03
Sequence

ATGTCATCCTCTTCTGCATTAATCTTGTTCAGCTCATTGCTAATTTTCTCATTAATTTAC
TCTCAAGGGAATGCACTTAGTTCAAATTACTATGAGAACACATGCCCTCAAGTTGAAGAT
ATTGTTACTCAAGTTGTTACTGAAGCAACAAAAAAGGACAAAACTGTCCCTGCTGCTCTT
CTAAGAATGCACTTCCATGACTGTTTCATAAGGGGTTGTGATGCTTCGGTGTTACTGAAC
TCAAAGAAGAACACTGCAGAAAAAGATGGTCCTCCTAACGTTTCTTTGCATGCATTCTAT
GTTATTGATAGTGCAAAGAAAGCCATTGAAGCGCGTTGCCCTGGCATAGTCTCCTGTGCT
GATATCTTAGCCTTTGCTGCTAGAGATTCTGTTGTCGTTTCTGGTGGACCTTCATGGGAC
GTGCCTAAAGGAAGAAAAGATGGAAGAACATCGAAAGCTAGTGAAACTATACAATTGCCA
GCTCCAACTTTTAACATAAATCAACTTCAACAAAGCTTCTCTCAAAGAGGATTATCACTT
GAAGACCTTGTCGCTCTCTCAGGTGGACACACCTTAGGATTCTCTCATTGTTCATCATTC
AATAACAGGATACACAATTTCAATAACACACATGATGTTGACCCAACATTGCATCCAACT
CTAGCAGCAACGTTAAAGAGCATTTGTCCACTGAAAAACAGGGCTAAAAATGCTGGAAGT
CCCATGGATCCTTCCTCAACGACGTTTGATAATACATATTACAAGTTAATTCTGCAGAAC
AAGAGTTTATTCTCTTCAGACCAAGCTTTGCTCAGTAATCCCAAGACTAAAAGTCTGGTT
TCTGATTTTGCTAGCTCAAAAGACGCGTTCTTTAAGGCTTTTGCTAATTCCATGATCAAA
ATGAGCAGCATAAATGGAGGTCAAGAGGTCAGAAGGGATTGTAGGGTGGCTAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400006537
PEP Infomation

pacid=37427108 transcript=PGSC0003DMT400009404 locus=PGSC0003DMG400003654 ID=PGSC0003DMT400009404.v4.03 annot-version=v4.03
Sequence

MSSSSALILFSSLLIFSLIYSQGNALSSNYYENTCPQVEDIVTQVVTEATKKDKTVPAAL
LRMHFHDCFIRGCDASVLLNSKKNTAEKDGPPNVSLHAFYVIDSAKKAIEARCPGIVSCA
DILAFAARDSVVVSGGPSWDVPKGRKDGRTSKASETIQLPAPTFNINQLQQSFSQRGLSL
EDLVALSGGHTLGFSHCSSFNNRIHNFNNTHDVDPTLHPTLAATLKSICPLKNRAKNAGS
PMDPSSTTFDNTYYKLILQNKSLFSSDQALLSNPKTKSLVSDFASSKDAFFKAFANSMIK
MSSINGGQEVRRDCRVAN*

Transcript Sequence

Transcript ID

PGSC0003DMT400009404
Transcript Infomation

pacid=37427108 locus=PGSC0003DMG400003654 ID=PGSC0003DMT400009404.v4.03 annot-version=v4.03
Sequence

ATGTCATCCTCTTCTGCATTAATCTTGTTCAGCTCATTGCTAATTTTCTCATTAATTTAC
TCTCAAGGGAATGCACTTAGTTCAAATTACTATGAGAACACATGCCCTCAAGTTGAAGAT
ATTGTTACTCAAGTTGTTACTGAAGCAACAAAAAAGGACAAAACTGTCCCTGCTGCTCTT
CTAAGAATGCACTTCCATGACTGTTTCATAAGGGGTTGTGATGCTTCGGTGTTACTGAAC
TCAAAGAAGAACACTGCAGAAAAAGATGGTCCTCCTAACGTTTCTTTGCATGCATTCTAT
GTTATTGATAGTGCAAAGAAAGCCATTGAAGCGCGTTGCCCTGGCATAGTCTCCTGTGCT
GATATCTTAGCCTTTGCTGCTAGAGATTCTGTTGTCGTTTCTGGTGGACCTTCATGGGAC
GTGCCTAAAGGAAGAAAAGATGGAAGAACATCGAAAGCTAGTGAAACTATACAATTGCCA
GCTCCAACTTTTAACATAAATCAACTTCAACAAAGCTTCTCTCAAAGAGGATTATCACTT
GAAGACCTTGTCGCTCTCTCAGGTGGACACACCTTAGGATTCTCTCATTGTTCATCATTC
AATAACAGGATACACAATTTCAATAACACACATGATGTTGACCCAACATTGCATCCAACT
CTAGCAGCAACGTTAAAGAGCATTTGTCCACTGAAAAACAGGGCTAAAAATGCTGGAAGT
CCCATGGATCCTTCCTCAACGACGTTTGATAATACATATTACAAGTTAATTCTGCAGAAC
AAGAGTTTATTCTCTTCAGACCAAGCTTTGCTCAGTAATCCCAAGACTAAAAGTCTGGTT
TCTGATTTTGCTAGCTCAAAAGACGCGTTCTTTAAGGCTTTTGCTAATTCCATGATCAAA
ATGAGCAGCATAAATGGAGGTCAAGAGGTCAGAAGGGATTGTAGGGTGGCTAATTAA