Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009384
CDS Infomation

pacid=37425448 polypeptide=PGSC0003DMP400006523 locus=PGSC0003DMG400003647 ID=PGSC0003DMT400009384.v4.03 annot-version=v4.03
Sequence

ATGTGGATCGACAAACATAAGCCTCATTTCCTGGAAGAGCTTGCAGTTCAAAAGAAGAAG
GTTGAAGAAGTGAAAACATGGTTTGAAGAAAGACAAAAAGCTGCAATGGATGGTCTTAGT
AATGTTCTTCTTGTTGCTGGACCTTCTGGTGTTGGAAAAACTGCAACTATCCATGCTATT
GCTTCGAATCTTGGTGTCAAAATATGGGAGTGGACCACACCTACTCCAACAGTTTGGCCA
GAGCATTTGCATAATTCTAATTCAGGGTTAAAATACATGTCAAAACTAGATGAGTTTGAA
GTTTTTGTTGAGAGGGTGAGAAAGTATGGATTGACTTCTCCAACGTTGAAGGGATCACAG
GCTTCAGTCATACTCTTAGTTGATGATCTTCCTGTGGTAAATGTAAGAGCTGCATATGGA
AGGCTTCAAAGGTGTTTGACCCTACTTGTGCAATTAGTCCGCATTCCAACAGCCATAGTG
ATCACCAACTATGACAAGGATGACTCTGCAGACTTCAGCACACGCTGCTGGGAAGAACTC
CTTCTATCTCTTCATAGTGCTGGTGCTTGTAAGGTCAACTTCAACCCTGTCACTGTCAAT
TCAATCAAAAAAACACTTACAGCTATATGCAGAAAGGAGCAGTGTGAAGTTGGCGCTGAT
TCAATTGACCTAATAGCCAAAGCGAGTGGAGGTGATATCAGACAAGCAATTAATTCTCTG
CAGTATCTCTGTCTTAAACCACATAGAAGGCCTATTCTATCGTCAAAAGAAAGACTGGAT
AATGCTAGTTGTTTGGATGATGTGTTTTGTTTGCCATTTGGAAAAGATGAAAATCTCTCT
CTATTCCATGCATTAGGCAAATTTCTACACAACAAAAGAGAAAGTGAGCACACAATTGCA
TCAGGTACATCTGACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400006523
PEP Infomation

pacid=37425448 transcript=PGSC0003DMT400009384 locus=PGSC0003DMG400003647 ID=PGSC0003DMT400009384.v4.03 annot-version=v4.03
Sequence

MWIDKHKPHFLEELAVQKKKVEEVKTWFEERQKAAMDGLSNVLLVAGPSGVGKTATIHAI
ASNLGVKIWEWTTPTPTVWPEHLHNSNSGLKYMSKLDEFEVFVERVRKYGLTSPTLKGSQ
ASVILLVDDLPVVNVRAAYGRLQRCLTLLVQLVRIPTAIVITNYDKDDSADFSTRCWEEL
LLSLHSAGACKVNFNPVTVNSIKKTLTAICRKEQCEVGADSIDLIAKASGGDIRQAINSL
QYLCLKPHRRPILSSKERLDNASCLDDVFCLPFGKDENLSLFHALGKFLHNKRESEHTIA
SGTSD*

Transcript Sequence

Transcript ID

PGSC0003DMT400009384
Transcript Infomation

pacid=37425448 locus=PGSC0003DMG400003647 ID=PGSC0003DMT400009384.v4.03 annot-version=v4.03
Sequence

ATGTGGATCGACAAACATAAGCCTCATTTCCTGGAAGAGCTTGCAGTTCAAAAGAAGAAG
GTTGAAGAAGTGAAAACATGGTTTGAAGAAAGACAAAAAGCTGCAATGGATGGTCTTAGT
AATGTTCTTCTTGTTGCTGGACCTTCTGGTGTTGGAAAAACTGCAACTATCCATGCTATT
GCTTCGAATCTTGGTGTCAAAATATGGGAGTGGACCACACCTACTCCAACAGTTTGGCCA
GAGCATTTGCATAATTCTAATTCAGGGTTAAAATACATGTCAAAACTAGATGAGTTTGAA
GTTTTTGTTGAGAGGGTGAGAAAGTATGGATTGACTTCTCCAACGTTGAAGGGATCACAG
GCTTCAGTCATACTCTTAGTTGATGATCTTCCTGTGGTAAATGTAAGAGCTGCATATGGA
AGGCTTCAAAGGTGTTTGACCCTACTTGTGCAATTAGTCCGCATTCCAACAGCCATAGTG
ATCACCAACTATGACAAGGATGACTCTGCAGACTTCAGCACACGCTGCTGGGAAGAACTC
CTTCTATCTCTTCATAGTGCTGGTGCTTGTAAGGTCAACTTCAACCCTGTCACTGTCAAT
TCAATCAAAAAAACACTTACAGCTATATGCAGAAAGGAGCAGTGTGAAGTTGGCGCTGAT
TCAATTGACCTAATAGCCAAAGCGAGTGGAGGTGATATCAGACAAGCAATTAATTCTCTG
CAGTATCTCTGTCTTAAACCACATAGAAGGCCTATTCTATCGTCAAAAGAAAGACTGGAT
AATGCTAGTTGTTTGGATGATGTGTTTTGTTTGCCATTTGGAAAAGATGAAAATCTCTCT
CTATTCCATGCATTAGGCAAATTTCTACACAACAAAAGAGAAAGTGAGCACACAATTGCA
TCAGGTACATCTGACTAA