Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009347
CDS Infomation

pacid=37426786 polypeptide=PGSC0003DMP400006494 locus=PGSC0003DMG400003634 ID=PGSC0003DMT400009347.v4.03 annot-version=v4.03
Sequence

ATGAAAGTCGCTAAGAGCAACTACTTCTTTTCATCTTTTTGCTTTCATTTCCTTTTCACG
ATCATTCTGCTGGCATTGAATCCAGTTCTGAGCATCCGATTCCCAGATCGGATCCCGGAG
GTTCCACAGGATGCCTCTAATCAGCCATTACAAACTGCAGTTTTCTCTCTCGGAAGCTTC
TGGAGATCGGAAGCGTCATTTGGCTGCTTAAACGGAATCGTAAGAACCACTGTCGGTTAT
TCTGGTGGTTCAAAAGCCAATCCCGAGTACAGAAATTTGGGCGACCACGCTGAATCTGTA
CAGGTCGAGTATGACCCCCAAGTACTTGGTTTCAGACAGCTATTGGAGGTCTTCTGGGCT
AGCCATGATTCCAGGCAAGTCTTTGGGCAAGGTCCTGATGTGGGTAACCAGTACAGGTCT
ATTATTTTCACAAGCGGCACTGAGGAATCCAGATTGGCTGCTGTTAGCAAAGAAAGAGAA
CAATCAAAGTCAAAGAGCAGCGTTGTTATCACTCAAATTCAACAGCTTGAAGCTTTTTAT
CCTGCAGAGCCTGAACATCAGAAATTTGAGCTCAAGCGGAACCCCTTCCTACTTCAATTG
ATGGGAAACTTGCCTGAGGAGGAGCTTGAGAGATCAACGCTGGCTACAAAACTAAATGGC
TATGCAGCAGAGCTTTGTTCATCAAGAATCCAAAAGCGGATTGATGCAAAGATCAATGAT
ATTATCAAGAAAGGTTGGCCCATTCTCAAAGAAGTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400006494
PEP Infomation

pacid=37426786 transcript=PGSC0003DMT400009347 locus=PGSC0003DMG400003634 ID=PGSC0003DMT400009347.v4.03 annot-version=v4.03
Sequence

MKVAKSNYFFSSFCFHFLFTIILLALNPVLSIRFPDRIPEVPQDASNQPLQTAVFSLGSF
WRSEASFGCLNGIVRTTVGYSGGSKANPEYRNLGDHAESVQVEYDPQVLGFRQLLEVFWA
SHDSRQVFGQGPDVGNQYRSIIFTSGTEESRLAAVSKEREQSKSKSSVVITQIQQLEAFY
PAEPEHQKFELKRNPFLLQLMGNLPEEELERSTLATKLNGYAAELCSSRIQKRIDAKIND
IIKKGWPILKEV*

Transcript Sequence

Transcript ID

PGSC0003DMT400009347
Transcript Infomation

pacid=37426786 locus=PGSC0003DMG400003634 ID=PGSC0003DMT400009347.v4.03 annot-version=v4.03
Sequence

ATGAAAGTCGCTAAGAGCAACTACTTCTTTTCATCTTTTTGCTTTCATTTCCTTTTCACG
ATCATTCTGCTGGCATTGAATCCAGTTCTGAGCATCCGATTCCCAGATCGGATCCCGGAG
GTTCCACAGGATGCCTCTAATCAGCCATTACAAACTGCAGTTTTCTCTCTCGGAAGCTTC
TGGAGATCGGAAGCGTCATTTGGCTGCTTAAACGGAATCGTAAGAACCACTGTCGGTTAT
TCTGGTGGTTCAAAAGCCAATCCCGAGTACAGAAATTTGGGCGACCACGCTGAATCTGTA
CAGGTCGAGTATGACCCCCAAGTACTTGGTTTCAGACAGCTATTGGAGGTCTTCTGGGCT
AGCCATGATTCCAGGCAAGTCTTTGGGCAAGGTCCTGATGTGGGTAACCAGTACAGGTCT
ATTATTTTCACAAGCGGCACTGAGGAATCCAGATTGGCTGCTGTTAGCAAAGAAAGAGAA
CAATCAAAGTCAAAGAGCAGCGTTGTTATCACTCAAATTCAACAGCTTGAAGCTTTTTAT
CCTGCAGAGCCTGAACATCAGAAATTTGAGCTCAAGCGGAACCCCTTCCTACTTCAATTG
ATGGGAAACTTGCCTGAGGAGGAGCTTGAGAGATCAACGCTGGCTACAAAACTAAATGGC
TATGCAGCAGAGCTTTGTTCATCAAGAATCCAAAAGCGGATTGATGCAAAGATCAATGAT
ATTATCAAGAAAGGTTGGCCCATTCTCAAAGAAGTTTAG