Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009345
CDS Infomation

pacid=37427853 polypeptide=PGSC0003DMP400006492 locus=PGSC0003DMG400003633 ID=PGSC0003DMT400009345.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTGAAAATGGCAGCACCGGCAACTCTCCTAGATCTAAAATTGCACTGATCACT
GGCATCACAGGCCAAGATGGTTCCTATCTCACTGAATTACTCATTAGCAAAAACTATGAA
GTCCATGGCCTTATTCGTAGATCCTCCAGTTTCAATACCCAACGCATCAATCACATTTAT
ATCGATCCTCATAACACCTACAGAGCCAAAATGAAGCTCCATTATGCTGATCTCTCCGAC
GCTAGTTCTCTCCGACGCTGGCTCGATATTATCCTCCCTGATGAGATTTACAACCTAGCT
GCTCAATCTCACGTCGCCGTCTCTTTTGAGATCCCTGATTACACCGCCGACGTGGTGGCT
ACTGGCGCCCTCCGCCTCCTTGAGGCGCTTCGTTCTCACATCTCCGCTACCGGAAGGTCT
CACGTCAAGTATTACCAAGCCGGATCATCGGAGATGTTCGGATCTACGCCGCCACCGCAA
TCGGAATCTACTCCGTTTCACCCGAGATCTCCTTACGCCGTTTCCAAATGCTCGGCGCAT
TGGTACACAGTGAATTACCGCGAAGCGTACGGGATATTCGCGTGCAATGGGATTCTCTTC
AACCACGAGTCTCCTCGTCGGGGTGAAAATTTCGTGACGAGGAAGATAACCCGGGCTGTA
GGGAGGATAAAAATCGGGTTACAGAGCAAGGTGTTTTTGGGGAATTTACAGGCGTCAAGG
GACTGGGGCTTTGCTGGAGACTATGTAGAAGCAATGTGGATGATGCTGCAGCAAGAGAAA
CCAGACGACTACGTTGTGGCAACGGAGGATTCACATACTGTAGAGGAGTTTCTAGAAGTA
GCATTTAGGTACGTTGGATTGAACTGGAAGGAACATGTGGAGATTGACAAGAGATATTTC
CGGCCAACGGAAGTTGATAATCTGAAAGGAGATGCAAGCAAAGCGACAAAAGTGTTGGGT
TGGAAACCAAAAGTGGGATTTGAGCAACTGGTGAAGATGATGGTGGATGAAGATGTAGAG
TTGGCTAAAAGAGAGAAAGTTCTTGTTGATGCTGGATATATTGATGCCCAACAACAGCCT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400006492
PEP Infomation

pacid=37427853 transcript=PGSC0003DMT400009345 locus=PGSC0003DMG400003633 ID=PGSC0003DMT400009345.v4.03 annot-version=v4.03
Sequence

MAAENGSTGNSPRSKIALITGITGQDGSYLTELLISKNYEVHGLIRRSSSFNTQRINHIY
IDPHNTYRAKMKLHYADLSDASSLRRWLDIILPDEIYNLAAQSHVAVSFEIPDYTADVVA
TGALRLLEALRSHISATGRSHVKYYQAGSSEMFGSTPPPQSESTPFHPRSPYAVSKCSAH
WYTVNYREAYGIFACNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKVFLGNLQASR
DWGFAGDYVEAMWMMLQQEKPDDYVVATEDSHTVEEFLEVAFRYVGLNWKEHVEIDKRYF
RPTEVDNLKGDASKATKVLGWKPKVGFEQLVKMMVDEDVELAKREKVLVDAGYIDAQQQP
*

Transcript Sequence

Transcript ID

PGSC0003DMT400009345
Transcript Infomation

pacid=37427853 locus=PGSC0003DMG400003633 ID=PGSC0003DMT400009345.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTGAAAATGGCAGCACCGGCAACTCTCCTAGATCTAAAATTGCACTGATCACT
GGCATCACAGGCCAAGATGGTTCCTATCTCACTGAATTACTCATTAGCAAAAACTATGAA
GTCCATGGCCTTATTCGTAGATCCTCCAGTTTCAATACCCAACGCATCAATCACATTTAT
ATCGATCCTCATAACACCTACAGAGCCAAAATGAAGCTCCATTATGCTGATCTCTCCGAC
GCTAGTTCTCTCCGACGCTGGCTCGATATTATCCTCCCTGATGAGATTTACAACCTAGCT
GCTCAATCTCACGTCGCCGTCTCTTTTGAGATCCCTGATTACACCGCCGACGTGGTGGCT
ACTGGCGCCCTCCGCCTCCTTGAGGCGCTTCGTTCTCACATCTCCGCTACCGGAAGGTCT
CACGTCAAGTATTACCAAGCCGGATCATCGGAGATGTTCGGATCTACGCCGCCACCGCAA
TCGGAATCTACTCCGTTTCACCCGAGATCTCCTTACGCCGTTTCCAAATGCTCGGCGCAT
TGGTACACAGTGAATTACCGCGAAGCGTACGGGATATTCGCGTGCAATGGGATTCTCTTC
AACCACGAGTCTCCTCGTCGGGGTGAAAATTTCGTGACGAGGAAGATAACCCGGGCTGTA
GGGAGGATAAAAATCGGGTTACAGAGCAAGGTGTTTTTGGGGAATTTACAGGCGTCAAGG
GACTGGGGCTTTGCTGGAGACTATGTAGAAGCAATGTGGATGATGCTGCAGCAAGAGAAA
CCAGACGACTACGTTGTGGCAACGGAGGATTCACATACTGTAGAGGAGTTTCTAGAAGTA
GCATTTAGGTACGTTGGATTGAACTGGAAGGAACATGTGGAGATTGACAAGAGATATTTC
CGGCCAACGGAAGTTGATAATCTGAAAGGAGATGCAAGCAAAGCGACAAAAGTGTTGGGT
TGGAAACCAAAAGTGGGATTTGAGCAACTGGTGAAGATGATGGTGGATGAAGATGTAGAG
TTGGCTAAAAGAGAGAAAGTTCTTGTTGATGCTGGATATATTGATGCCCAACAACAGCCT
TGA