Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009341
CDS Infomation

pacid=37427263 polypeptide=PGSC0003DMP400006489 locus=PGSC0003DMG400003630 ID=PGSC0003DMT400009341.v4.03 annot-version=v4.03
Sequence

ATGGCTCTGAAGTTTCTGAATAAGAAGGGATGGCACACGGGGAGTCTTCGGAACATTGAA
AATGTATGGAAAGCAGAGCAGAAGCATGACGCCGAACAGAGGAAGTTGGAGGAGCTCCGC
AAGCAGATCCAGGAGGAGCGTGAGCGCAGTGAATTTCGCCAACTCCAGGAACAAGCTGGC
TTGGTTACCAGGCAAGAGAGGCTGGAATTTCTTTATGATTCTGGATTAGCTGTTGGAAAG
GGAAGTTCTAGTGGGTTTGAATCTTTGTCCAAGCCGGCTGAACCTGTAACAGCTGCTGTA
ACTGCTGCTGATTCCAGTTCTTCTGCCAAACCGCAAGCATCTGTGCCAGGAGCTCTATTT
GAGGACAAGCCACAATCTTCCAATGATGCTTGGAGAAAACTCCATTCTGATCCCTTGCTT
ATGATTCGTCAGCGAGAGCAAGAAGCCCTTGCACGTGTGAAGAACAACCCTGTCCAGATG
GCCATGATTCGTAAATCTGTTGAAACAATGAAAAATAAGGATAAGATGCATGATGAGAAA
GAGAAGGATGAACACAGACATAAACATCGAGACAAGAAATCAAAGCATCACAACTCGAAA
TCGAAGCATTTGAGGAATTCTTCACCTAGACAAACCTTTGATCCAGATGAATACTCGAGC
GAAGATGATTCCAGGAGAAAGAGAGAGTCTCGCAGGGACAAGAGGATTAATGATCAGAAA
TTGTCTCTCTTACGAGATCCTGAAGGAGGCAATGATTTTGACAAAGAAAAAACTAAGATT
AGGAATGATAATGAAGCTGTGAAACATGAGAGGCAGGCAAGATCTGATCTGCCAAGGCAA
GAATCCCATCGTAACTCTCGTGAGCAGACAAGATCTGATATACCAAGGCATGAATCCCAT
CGTAACTCTCGTGAGCAGACAAGATCTGATATACCAAGGCATGAATCCCATCGTAACTCT
CGTGAGCAGACAAGATCTGATATACCAAGGCATGAATCCCATCGTAACTCTCGTGAGCAG
ACAAGATCTGATATACCAAGGCATGAATCCCATCGTAACTCTCGTGAGCAGACAAGATCT
GATATACCAAGGCATGAATCCCATCGTAACTCTCGTGAGCAGACAAGATCTGATATACCA
AGGCATGAATCCCATCGTAACTCTCGTGAGCAGACAAGATCTGATATACCAAGGCATGAA
TCCCATCGTAACTCTCGTGAGCAGACAAGATCTGATATACCAAGGCATGAATCCCATCGT
AACTCTCGTGAGCAGACAAGATCTGATATACCAAGGCATGAATCCCATCGTAACTCTCGT
GAGCAGACAAGATCTGATATACCAAGGCATGAATCCCATCGTAACTCTCGTGAGCAGACA
AGATCTGATATACCAAGGGACGAATCCCATCGTAACTCTCGTGAGCAGACAAGATCTGAT
ATACCAAGGGACGAATCCCATCGTAACTCTCGTGAGCAGACAAGATCTGATATACCTAGG
GACGAATCCCATCGTAACTCTCGTGAGCAGCCAAGATCCGATCCTCCAAGGCACGAGTCG
CGTCATAACTCTCGCAAGCCTGTTAGGCTTTCTGAAGAAGAGAGAGCTGCCCGTCTACAG
GAGATGCAGAAAGATGCTGAGGTCCATGAGGAGCAAAGATGGAAAAGACTTAAGAAGGCA
GAGGAAAAAGATGCTAAGGAAGCTGTACATGCTGGCTCGTCTGGTGGTAGGAATTTTCTG
GACGCTGCTCAAAGAAGTGTTTATGGTGCTGGAAAGGGAGGAAGCTCCACAATTGAGGAA
AGTGTTCGTCGCCGAACACATTATTCACAGAGAGCAGAAGCTTCAGAAGGCAATGCTTTT
CGGCGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400006489
PEP Infomation

pacid=37427263 transcript=PGSC0003DMT400009341 locus=PGSC0003DMG400003630 ID=PGSC0003DMT400009341.v4.03 annot-version=v4.03
Sequence

MALKFLNKKGWHTGSLRNIENVWKAEQKHDAEQRKLEELRKQIQEERERSEFRQLQEQAG
LVTRQERLEFLYDSGLAVGKGSSSGFESLSKPAEPVTAAVTAADSSSSAKPQASVPGALF
EDKPQSSNDAWRKLHSDPLLMIRQREQEALARVKNNPVQMAMIRKSVETMKNKDKMHDEK
EKDEHRHKHRDKKSKHHNSKSKHLRNSSPRQTFDPDEYSSEDDSRRKRESRRDKRINDQK
LSLLRDPEGGNDFDKEKTKIRNDNEAVKHERQARSDLPRQESHRNSREQTRSDIPRHESH
RNSREQTRSDIPRHESHRNSREQTRSDIPRHESHRNSREQTRSDIPRHESHRNSREQTRS
DIPRHESHRNSREQTRSDIPRHESHRNSREQTRSDIPRHESHRNSREQTRSDIPRHESHR
NSREQTRSDIPRHESHRNSREQTRSDIPRHESHRNSREQTRSDIPRDESHRNSREQTRSD
IPRDESHRNSREQTRSDIPRDESHRNSREQPRSDPPRHESRHNSRKPVRLSEEERAARLQ
EMQKDAEVHEEQRWKRLKKAEEKDAKEAVHAGSSGGRNFLDAAQRSVYGAGKGGSSTIEE
SVRRRTHYSQRAEASEGNAFRR*

Transcript Sequence

Transcript ID

PGSC0003DMT400009341
Transcript Infomation

pacid=37427263 locus=PGSC0003DMG400003630 ID=PGSC0003DMT400009341.v4.03 annot-version=v4.03
Sequence

ATGGCTCTGAAGTTTCTGAATAAGAAGGGATGGCACACGGGGAGTCTTCGGAACATTGAA
AATGTATGGAAAGCAGAGCAGAAGCATGACGCCGAACAGAGGAAGTTGGAGGAGCTCCGC
AAGCAGATCCAGGAGGAGCGTGAGCGCAGTGAATTTCGCCAACTCCAGGAACAAGCTGGC
TTGGTTACCAGGCAAGAGAGGCTGGAATTTCTTTATGATTCTGGATTAGCTGTTGGAAAG
GGAAGTTCTAGTGGGTTTGAATCTTTGTCCAAGCCGGCTGAACCTGTAACAGCTGCTGTA
ACTGCTGCTGATTCCAGTTCTTCTGCCAAACCGCAAGCATCTGTGCCAGGAGCTCTATTT
GAGGACAAGCCACAATCTTCCAATGATGCTTGGAGAAAACTCCATTCTGATCCCTTGCTT
ATGATTCGTCAGCGAGAGCAAGAAGCCCTTGCACGTGTGAAGAACAACCCTGTCCAGATG
GCCATGATTCGTAAATCTGTTGAAACAATGAAAAATAAGGATAAGATGCATGATGAGAAA
GAGAAGGATGAACACAGACATAAACATCGAGACAAGAAATCAAAGCATCACAACTCGAAA
TCGAAGCATTTGAGGAATTCTTCACCTAGACAAACCTTTGATCCAGATGAATACTCGAGC
GAAGATGATTCCAGGAGAAAGAGAGAGTCTCGCAGGGACAAGAGGATTAATGATCAGAAA
TTGTCTCTCTTACGAGATCCTGAAGGAGGCAATGATTTTGACAAAGAAAAAACTAAGATT
AGGAATGATAATGAAGCTGTGAAACATGAGAGGCAGGCAAGATCTGATCTGCCAAGGCAA
GAATCCCATCGTAACTCTCGTGAGCAGACAAGATCTGATATACCAAGGCATGAATCCCAT
CGTAACTCTCGTGAGCAGACAAGATCTGATATACCAAGGCATGAATCCCATCGTAACTCT
CGTGAGCAGACAAGATCTGATATACCAAGGCATGAATCCCATCGTAACTCTCGTGAGCAG
ACAAGATCTGATATACCAAGGCATGAATCCCATCGTAACTCTCGTGAGCAGACAAGATCT
GATATACCAAGGCATGAATCCCATCGTAACTCTCGTGAGCAGACAAGATCTGATATACCA
AGGCATGAATCCCATCGTAACTCTCGTGAGCAGACAAGATCTGATATACCAAGGCATGAA
TCCCATCGTAACTCTCGTGAGCAGACAAGATCTGATATACCAAGGCATGAATCCCATCGT
AACTCTCGTGAGCAGACAAGATCTGATATACCAAGGCATGAATCCCATCGTAACTCTCGT
GAGCAGACAAGATCTGATATACCAAGGCATGAATCCCATCGTAACTCTCGTGAGCAGACA
AGATCTGATATACCAAGGGACGAATCCCATCGTAACTCTCGTGAGCAGACAAGATCTGAT
ATACCAAGGGACGAATCCCATCGTAACTCTCGTGAGCAGACAAGATCTGATATACCTAGG
GACGAATCCCATCGTAACTCTCGTGAGCAGCCAAGATCCGATCCTCCAAGGCACGAGTCG
CGTCATAACTCTCGCAAGCCTGTTAGGCTTTCTGAAGAAGAGAGAGCTGCCCGTCTACAG
GAGATGCAGAAAGATGCTGAGGTCCATGAGGAGCAAAGATGGAAAAGACTTAAGAAGGCA
GAGGAAAAAGATGCTAAGGAAGCTGTACATGCTGGCTCGTCTGGTGGTAGGAATTTTCTG
GACGCTGCTCAAAGAAGTGTTTATGGTGCTGGAAAGGGAGGAAGCTCCACAATTGAGGAA
AGTGTTCGTCGCCGAACACATTATTCACAGAGAGCAGAAGCTTCAGAAGGCAATGCTTTT
CGGCGATAA