Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009296
CDS Infomation

pacid=37427995 polypeptide=PGSC0003DMP400006449 locus=PGSC0003DMG400003607 ID=PGSC0003DMT400009296.v4.03 annot-version=v4.03
Sequence

ATGGATGTTGAGAAAGTCTTCCACATGACAGGAGGAGTTGGAGAAACTAGCTATTCCAGG
AATTCTTCACTTCAGAAGAAGGCATCTGAAATGGTGAAGCATATAACTCTAGAGACAGTG
GAAGAAGTTTATTTAGCAACAAAGCCTAAAAGCATAGGCATAGCTGACTTAGGTTGTTCC
TCAGGACCTAATACTTTGTCAAACATTAAAGACATCCTGGATAAAATCGAAGGTACCAGC
AGCAATAAGCTGAAGCAATCAGCACCGGAGTTTCGAGTGTTTCTAAACGACCTTCCCACG
AACGACTTCAACGCAATATTCCAGGCCTTGCCAGAATTTCATCAATGGTTAAAGCAGAAA
AATGGAAGTGGTCATGAAAATAAAGGATCTAATTCAAATATATATGTAGCTGCTTATCCA
GGCTCATTTTATGGAAGACTTTTTCCAGATCATTGCTTGCACTTTATCTATTCCTCTTAT
AGTTTGCACTGGCTTTCTAAGGTTCCACGAGGACTATACGATGAACAGGGGAATTCCTTG
AACAAAAATAGCATATACATATCTGAAAATAGTCCTTGTGAGGTTTCGAAAGTTTACTTT
GATCAGTTTAAGGAAGATTTGTCATTGTTTCTCCAATCACGGTCGGATGAGCTGGTTAGT
GGAGGAAAGATGGTTCTGATTTTATTAGGAAGAGAAGGTTTTAATCATGTTGACAGAGGA
AATGCTTTCTTCTGGAAAATCCTCTATCAGGCGTTAACAAATTTAATTAGCAAGGGAGAA
GTGGAAAAGGAAAAGCTTGATTCTTACGAAGTACACTTTTATGCACCTTGCAAGGAAGAA
ATAGAAGAGGTAGCAAGGGAAAACGGGTGTTTTGAAGTGGAGAGGCTTGAAATGTTTGAA
ATAGAGAAAACAATTGGAAAAGGCATTAGCTATGGGACAATGGTGGCTATGACAGTTAGA
TCAATCCAAGAATCAATGCTGGCTCACCATTTTGGAGAAACAATTATACAAGGGTTGTTT
AAGGAATATGGTAGGTTAGTGGATGAAGAAATGGCCAAAGAGGAAATTAGGCCTATCACT
TTCCTTCTCGTTCTTCGAAAACCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400006449
PEP Infomation

pacid=37427995 transcript=PGSC0003DMT400009296 locus=PGSC0003DMG400003607 ID=PGSC0003DMT400009296.v4.03 annot-version=v4.03
Sequence

MDVEKVFHMTGGVGETSYSRNSSLQKKASEMVKHITLETVEEVYLATKPKSIGIADLGCS
SGPNTLSNIKDILDKIEGTSSNKLKQSAPEFRVFLNDLPTNDFNAIFQALPEFHQWLKQK
NGSGHENKGSNSNIYVAAYPGSFYGRLFPDHCLHFIYSSYSLHWLSKVPRGLYDEQGNSL
NKNSIYISENSPCEVSKVYFDQFKEDLSLFLQSRSDELVSGGKMVLILLGREGFNHVDRG
NAFFWKILYQALTNLISKGEVEKEKLDSYEVHFYAPCKEEIEEVARENGCFEVERLEMFE
IEKTIGKGISYGTMVAMTVRSIQESMLAHHFGETIIQGLFKEYGRLVDEEMAKEEIRPIT
FLLVLRKP*

Transcript Sequence

Transcript ID

PGSC0003DMT400009296
Transcript Infomation

pacid=37427995 locus=PGSC0003DMG400003607 ID=PGSC0003DMT400009296.v4.03 annot-version=v4.03
Sequence

ATGGATGTTGAGAAAGTCTTCCACATGACAGGAGGAGTTGGAGAAACTAGCTATTCCAGG
AATTCTTCACTTCAGAAGAAGGCATCTGAAATGGTGAAGCATATAACTCTAGAGACAGTG
GAAGAAGTTTATTTAGCAACAAAGCCTAAAAGCATAGGCATAGCTGACTTAGGTTGTTCC
TCAGGACCTAATACTTTGTCAAACATTAAAGACATCCTGGATAAAATCGAAGGTACCAGC
AGCAATAAGCTGAAGCAATCAGCACCGGAGTTTCGAGTGTTTCTAAACGACCTTCCCACG
AACGACTTCAACGCAATATTCCAGGCCTTGCCAGAATTTCATCAATGGTTAAAGCAGAAA
AATGGAAGTGGTCATGAAAATAAAGGATCTAATTCAAATATATATGTAGCTGCTTATCCA
GGCTCATTTTATGGAAGACTTTTTCCAGATCATTGCTTGCACTTTATCTATTCCTCTTAT
AGTTTGCACTGGCTTTCTAAGGTTCCACGAGGACTATACGATGAACAGGGGAATTCCTTG
AACAAAAATAGCATATACATATCTGAAAATAGTCCTTGTGAGGTTTCGAAAGTTTACTTT
GATCAGTTTAAGGAAGATTTGTCATTGTTTCTCCAATCACGGTCGGATGAGCTGGTTAGT
GGAGGAAAGATGGTTCTGATTTTATTAGGAAGAGAAGGTTTTAATCATGTTGACAGAGGA
AATGCTTTCTTCTGGAAAATCCTCTATCAGGCGTTAACAAATTTAATTAGCAAGGGAGAA
GTGGAAAAGGAAAAGCTTGATTCTTACGAAGTACACTTTTATGCACCTTGCAAGGAAGAA
ATAGAAGAGGTAGCAAGGGAAAACGGGTGTTTTGAAGTGGAGAGGCTTGAAATGTTTGAA
ATAGAGAAAACAATTGGAAAAGGCATTAGCTATGGGACAATGGTGGCTATGACAGTTAGA
TCAATCCAAGAATCAATGCTGGCTCACCATTTTGGAGAAACAATTATACAAGGGTTGTTT
AAGGAATATGGTAGGTTAGTGGATGAAGAAATGGCCAAAGAGGAAATTAGGCCTATCACT
TTCCTTCTCGTTCTTCGAAAACCATAA