Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400009282
CDS Infomation

pacid=37424901 polypeptide=PGSC0003DMP400006438 locus=PGSC0003DMG400003603 ID=PGSC0003DMT400009282.v4.03 annot-version=v4.03
Sequence

ATGAATGATCTCATGACGAAATCGTTCTTAAGTTATGTGGAATTGAAGAAACAAGCCCAT
TTGGATCTTGAAACAGAGAGGGATTTGGAGATGGGCCAACTCAACCGCACAGATGAAGAC
AATCTTTCCAACTTCTTCCGTGAAATCGAGGCAGTGAAGGGTGATATTCAAGAGATAACT
AATCTCTTGATCGATCTTCAAAATCTGAATGAGGAGACAAAAACTACTCACGGTCCCAAA
GTTCTTCGTGGCATTAGAGACAGAATGGATTCTGATATGGTCTCTGTCCTTCGCAAAGCC
AAGATTGTCAAGGCAAAACTTGAAGCACTTGACAAATCAAATGTGGGGAATCGCAAATTA
TCAGTGGCATATGCACAAGGCACTGTGGTTGATCGAACGAGAGTTAACATGACTAATGGA
TTGAGGGTCAAGCTTAGGGATATCATGAATGATTTTCAGGCTTTGAGAGAAAAAATCTTG
TCAGATTACAAAGACTGCCTCAGAAGAAGATATTACAATGAGACGGGGAAGGAGCCAACA
GAGGAAGTGATTGAGAAGATGGTTTCAGGAGAAAGCGGGAAAGTTCAAATATTTGCAGCA
AAAACAGAGATGAATCTTGATGACACAGATAGGCACGAGGCTGTAATGGACATAAAGAAG
AGCCTGGACAAACTTCATCAAGTGTTTCTTGATATGGCTGTTCTAGTTGAGACTCAAGGT
GAACAGATTGATGACATTGAGCATAATATGGCCATTGCTGGAAGCTTCATCAGTGGTGGA
ACAAACAGTCTTTTCTATGCTAAGCAGCAGCAGAAGAAGGGAAGGGCATGGATATGTTGG
GTATGGGCTGTGGTATTGATCATTTTGGTTGTCTGCTTAATTGCTACATTGAGCTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400006438
PEP Infomation

pacid=37424901 transcript=PGSC0003DMT400009282 locus=PGSC0003DMG400003603 ID=PGSC0003DMT400009282.v4.03 annot-version=v4.03
Sequence

MNDLMTKSFLSYVELKKQAHLDLETERDLEMGQLNRTDEDNLSNFFREIEAVKGDIQEIT
NLLIDLQNLNEETKTTHGPKVLRGIRDRMDSDMVSVLRKAKIVKAKLEALDKSNVGNRKL
SVAYAQGTVVDRTRVNMTNGLRVKLRDIMNDFQALREKILSDYKDCLRRRYYNETGKEPT
EEVIEKMVSGESGKVQIFAAKTEMNLDDTDRHEAVMDIKKSLDKLHQVFLDMAVLVETQG
EQIDDIEHNMAIAGSFISGGTNSLFYAKQQQKKGRAWICWVWAVVLIILVVCLIATLSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400009282
Transcript Infomation

pacid=37424901 locus=PGSC0003DMG400003603 ID=PGSC0003DMT400009282.v4.03 annot-version=v4.03
Sequence

ATGAATGATCTCATGACGAAATCGTTCTTAAGTTATGTGGAATTGAAGAAACAAGCCCAT
TTGGATCTTGAAACAGAGAGGGATTTGGAGATGGGCCAACTCAACCGCACAGATGAAGAC
AATCTTTCCAACTTCTTCCGTGAAATCGAGGCAGTGAAGGGTGATATTCAAGAGATAACT
AATCTCTTGATCGATCTTCAAAATCTGAATGAGGAGACAAAAACTACTCACGGTCCCAAA
GTTCTTCGTGGCATTAGAGACAGAATGGATTCTGATATGGTCTCTGTCCTTCGCAAAGCC
AAGATTGTCAAGGCAAAACTTGAAGCACTTGACAAATCAAATGTGGGGAATCGCAAATTA
TCAGTGGCATATGCACAAGGCACTGTGGTTGATCGAACGAGAGTTAACATGACTAATGGA
TTGAGGGTCAAGCTTAGGGATATCATGAATGATTTTCAGGCTTTGAGAGAAAAAATCTTG
TCAGATTACAAAGACTGCCTCAGAAGAAGATATTACAATGAGACGGGGAAGGAGCCAACA
GAGGAAGTGATTGAGAAGATGGTTTCAGGAGAAAGCGGGAAAGTTCAAATATTTGCAGCA
AAAACAGAGATGAATCTTGATGACACAGATAGGCACGAGGCTGTAATGGACATAAAGAAG
AGCCTGGACAAACTTCATCAAGTGTTTCTTGATATGGCTGTTCTAGTTGAGACTCAAGGT
GAACAGATTGATGACATTGAGCATAATATGGCCATTGCTGGAAGCTTCATCAGTGGTGGA
ACAAACAGTCTTTTCTATGCTAAGCAGCAGCAGAAGAAGGGAAGGGCATGGATATGTTGG
GTATGGGCTGTGGTATTGATCATTTTGGTTGTCTGCTTAATTGCTACATTGAGCTCTTGA